# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\223417-6mo-GFAP-IFN-20x-cerebellum-iba1-6.swc.swc created with StdSwc version 1.31 on 5/20/22.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\223417-6mo-GFAP-IFN-20x-cerebellum-iba1-6.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  171.43  125.68  84.13
2.5  Seg length ending at pt. 2 <= 0.1 at 0.0332.  (removed)
     A       X, Y, Z:  171.44  125.71  84.14
2.5  Seg length ending at pt. 4 <= 0.1 at 0.0787.  (removed)
     A       X, Y, Z:  171.48  125.81  84.16
2.5  Seg length ending at pt. 60 <= 0.1 at 0.0768.  (removed)
     A       X, Y, Z:  179.02  129.39  85.7
2.5  Seg length ending at pt. 136 <= 0.1 at 0.0831.  (removed)
     A       X, Y, Z:  182.35  137.42  73.9
2.5  Seg length ending at pt. 210 <= 0.1 at 0.0949.  (removed)
     A       X, Y, Z:  184.31  138.12  75.9
2.5  Seg length ending at pt. 506 <= 0.1 at 0.064.  (removed)
     A       X, Y, Z:  171.43  125.68  84.13
2.5  Seg length ending at pt. 611 <= 0.1 at 0.09.  (removed)
     A       X, Y, Z:  159.31  127.58  98.27
2.5  Seg length ending at pt. 773 <= 0.1 at 0.0911.  (removed)
     A       X, Y, Z:  168.01  122.36  81.8
2.5  Seg length ending at pt. 983 <= 0.1 at 0.0866.  (removed)
     A       X, Y, Z:  151.56  119.25  78.5
2.5  Seg length ending at pt. 1036 <= 0.1 at 0.064.  (removed)
     A       X, Y, Z:  171.43  125.68  84.13
2.5  Seg length ending at pt. 1091 <= 0.1 at 0.0883.  (removed)
     A       X, Y, Z:  172.04  117.69  82.61
2.5  Seg length ending at pt. 1096 <= 0.1 at 0.0854.  (removed)
     A       X, Y, Z:  172.25  117.1  82.82
2.5  Seg length ending at pt. 1186 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  171.43  125.68  84.13
2.5  Seg length ending at pt. 1235 <= 0.1 at 0.0949.  (removed)
     A       X, Y, Z:  177.62  124.96  93.08
2.5  Seg length ending at pt. 1306 <= 0.1 at 0.049.  (removed)
     A       X, Y, Z:  186.26  119.02  94.06
2.5  Seg length ending at pt. 1308 <= 0.1 at 0.0245.  (removed)
     A       X, Y, Z:  186.28  118.99  94.07
2.5  Seg length ending at pt. 1349 <= 0.1 at 0.0245.  (removed)
     A       X, Y, Z:  186.28  118.99  94.07
2.5  Seg length ending at pt. 1452 <= 0.1 at 0.086.  (removed)
     A       X, Y, Z:  186.28  118.99  94.07
2.5  Seg length ending at pt. 1469 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  171.43  125.68  84.13
2.5  Seg length ending at pt. 1530 <= 0.1 at 0.0714.  (removed)
     A       X, Y, Z:  180.69  126.5  87.04
2.5  Seg length ending at pt. 1605 <= 0.1 at 0.07.  (removed)
     A       X, Y, Z:  191.39  123.56  86.76
2.5  Seg length ending at pt. 1622 <= 0.1 at 0.0906.  (removed)
     A       X, Y, Z:  193.68  123.25  86.9
2.5  Seg length ending at pt. 1631 <= 0.1 at 0.1.  (removed)
     A       X, Y, Z:  194.82  122.4  86.75
2.5  Seg length ending at pt. 1874 <= 0.1 at 0.0906.  (removed)
     A       X, Y, Z:  193.68  123.25  86.9
2.5  Seg length ending at pt. 2033 <= 0.1 at 0.0894.  (removed)
     A       X, Y, Z:  166.57  132.19  79.1
2.5  Seg length ending at pt. 2142 <= 0.1 at 0.0755.  (removed)
     A       X, Y, Z:  166.87  134.85  86.13
2.5  Seg length ending at pt. 2173 <= 0.1 at 0.0849.  (removed)
     A       X, Y, Z:  165.14  139.27  86.65
2.5  Seg length ending at pt. 2186 <= 0.1 at 0.0632.  (removed)
     A       X, Y, Z:  165.28  141.09  86.48
2.5  Seg length ending at pt. 2333 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  171.52  125.95  84.22
2.5  Seg length ending at pt. 3 <= 0.1 at 0.064.  (removed)
     A       X, Y, Z:  171.45  125.74  84.14
2.5  Seg length ending at pt. 1307 <= 0.1 at 0.0938.  (removed)
     A       X, Y, Z:  186.3  119.0  94.08
2.6  Line 61 and line 454 have the same coordinates.  (second line removed)
     A      X, Y, Z:  179.05  129.47  85.7
2.6  Line 126 and line 324 have the same coordinates.  (second line removed)
     A      X, Y, Z:  180.91  137.47  75.61
2.6  Line 137 and line 198 have the same coordinates.  (second line removed)
     A      X, Y, Z:  182.42  137.41  73.85
2.6  Line 211 and line 220 have the same coordinates.  (second line removed)
     A      X, Y, Z:  184.35  138.13  75.98
2.6  Line 513 and line 750 have the same coordinates.  (second line removed)
     A      X, Y, Z:  170.31  125.1  86.45
2.6  Line 546 and line 701 have the same coordinates.  (second line removed)
     A      X, Y, Z:  167.75  122.88  96.78
2.6  Line 612 and line 680 have the same coordinates.  (second line removed)
     A      X, Y, Z:  159.24  127.62  98.28
2.6  Line 774 and line 805 have the same coordinates.  (second line removed)
     A      X, Y, Z:  167.93  122.33  81.76
2.6  Line 830 and line 870 have the same coordinates.  (second line removed)
     A      X, Y, Z:  166.78  118.62  84.76
2.6  Line 904 and line 1023 have the same coordinates.  (second line removed)
     A      X, Y, Z:  162.82  117.1  77.14
2.6  Line 979 and line 1012 have the same coordinates.  (second line removed)
     A      X, Y, Z:  151.9  119.3  77.94
2.6  Line 984 and line 1009 have the same coordinates.  (second line removed)
     A      X, Y, Z:  151.48  119.23  78.55
2.6  Line 1092 and line 1161 have the same coordinates.  (second line removed)
     A      X, Y, Z:  172.09  117.63  82.63
2.6  Line 1097 and line 1124 have the same coordinates.  (second line removed)
     A      X, Y, Z:  172.22  117.02  82.82
2.6  Line 1236 and line 1455 have the same coordinates.  (second line removed)
     A      X, Y, Z:  177.69  124.91  93.1
2.6  Line 1470 and line 1979 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  171.52  125.95  84.22
2.6  Line 1531 and line 1943 have the same coordinates.  (second line removed)
     A      X, Y, Z:  180.76  126.48  87.04
2.6  Line 1606 and line 1892 have the same coordinates.  (second line removed)
     A      X, Y, Z:  191.45  123.53  86.77
2.6  Line 1632 and line 1859 have the same coordinates.  (second line removed)
     A      X, Y, Z:  194.87  122.33  86.75
2.6  Line 1765 and line 1804 have the same coordinates.  (second line removed)
     A      X, Y, Z:  212.04  113.08  84.41
2.6  Line 2034 and line 2113 have the same coordinates.  (second line removed)
     A      X, Y, Z:  166.53  132.27  79.11
2.6  Line 2116 and line 2290 have the same coordinates.  (second line removed)
     A      X, Y, Z:  165.87  132.03  80.87
2.6  Line 2143 and line 2262 have the same coordinates.  (second line removed)
     A      X, Y, Z:  166.92  134.88  86.19
2.6  Line 2174 and line 2233 have the same coordinates.  (second line removed)
     A      X, Y, Z:  165.13  139.36  86.63
2.6  Line 2187 and line 2231 have the same coordinates.  (second line removed)
     A      X, Y, Z:  165.3  141.16  86.49
2.6  Line 2369 and line 2380 have the same coordinates.  (second line removed)
     A      X, Y, Z:  171.33  130.88  94.82
4.4  Line 5 of rad 1.73298 links to 1 of rad 0.67.  (no action taken)
     B1      X, Y, Z:  171.52  125.94  84.18
4.4  Line 750 of rad 1.49976 links to 512 of rad 0.707655.  (no action taken)
     B1      X, Y, Z:  170.03  124.78  86.08
4.4  Line 1037 of rad 1.58112 links to 1 of rad 0.67.  (no action taken)
     B1      X, Y, Z:  171.25  125.67  84.05
4.4  Line 1470 of rad 1.55259 links to 1 of rad 0.67.  (no action taken)
     B1      X, Y, Z:  171.52  125.95  84.22
2.1  Line 1 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  171.43  125.68  84.13
2.1  Line 1305 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  186.24  119.06  94.04
 
 


Number of type A irregularities = 56
Number of type B1 irregularities = 8
Number of type B2 irregularities = 0
Number of type C irregularities = 0
