# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\223417-6mo-GFAP-IFN-20x-cerebellum-iba1-3_2.swc.swc created with StdSwc version 1.31 on 5/20/22.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\223417-6mo-GFAP-IFN-20x-cerebellum-iba1-3_2.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  187.4  213.94  59.28
2.5  Seg length ending at pt. 2 <= 0.1 at 0.0678.  (removed)
     A       X, Y, Z:  187.37  214.0  59.29
2.5  Seg length ending at pt. 6 <= 0.1 at 0.099.  (removed)
     A       X, Y, Z:  187.06  214.38  59.34
2.5  Seg length ending at pt. 65 <= 0.1 at 0.0949.  (removed)
     A       X, Y, Z:  178.61  216.72  63.1
2.5  Seg length ending at pt. 108 <= 0.1 at 0.0927.  (removed)
     A       X, Y, Z:  172.59  218.69  66.56
2.5  Seg length ending at pt. 186 <= 0.1 at 0.0762.  (removed)
     A       X, Y, Z:  160.85  216.27  69.68
2.5  Seg length ending at pt. 320 <= 0.1 at 0.086.  (removed)
     A       X, Y, Z:  141.18  212.81  64.69
2.4  Seg length ending at pt. 397 >= 6.0 stdevs above mean at 0.6961.  (no action taken)
     B1      X, Y, Z:  141.08  212.88  65.33
2.4  Seg length ending at pt. 398 >= 6.0 stdevs above mean at 0.6101.  (no action taken)
     B1      X, Y, Z:  141.09  212.99  65.93
2.4  Seg length ending at pt. 423 >= 6.0 stdevs above mean at 0.7539.  (no action taken)
     B1      X, Y, Z:  161.02  216.45  70.36
2.4  Seg length ending at pt. 424 >= 6.0 stdevs above mean at 0.6843.  (no action taken)
     B1      X, Y, Z:  161.15  216.62  71.01
2.5  Seg length ending at pt. 475 <= 0.1 at 0.0927.  (removed)
     A       X, Y, Z:  172.59  218.69  66.56
2.5  Seg length ending at pt. 641 <= 0.1 at 0.0917.  (removed)
     A       X, Y, Z:  150.92  229.53  77.8
2.5  Seg length ending at pt. 765 <= 0.1 at 0.0755.  (removed)
     A       X, Y, Z:  174.19  222.87  66.32
2.5  Seg length ending at pt. 1119 <= 0.1 at 0.0922.  (removed)
     A       X, Y, Z:  197.47  205.54  62.77
2.5  Seg length ending at pt. 1152 <= 0.1 at 0.086.  (removed)
     A       X, Y, Z:  202.49  205.46  64.15
2.5  Seg length ending at pt. 1244 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  215.84  207.02  71.31
2.5  Seg length ending at pt. 1722 <= 0.1 at 0.0906.  (removed)
     A       X, Y, Z:  196.23  216.37  66.27
2.4  Seg length ending at pt. 1779 >= 6.0 stdevs above mean at 0.703.  (no action taken)
     B1      X, Y, Z:  201.03  223.66  66.77
2.4  Seg length ending at pt. 1780 >= 6.0 stdevs above mean at 0.6304.  (no action taken)
     B1      X, Y, Z:  201.06  224.0  67.3
2.5  Seg length ending at pt. 1797 <= 0.1 at 0.0854.  (removed)
     A       X, Y, Z:  200.93  226.06  70.33
2.5  Seg length ending at pt. 1819 <= 0.1 at 0.097.  (removed)
     A       X, Y, Z:  199.85  224.96  76.87
2.4  Seg length ending at pt. 1835 >= 6.0 stdevs above mean at 0.7215.  (no action taken)
     B1      X, Y, Z:  199.72  224.75  77.65
2.4  Seg length ending at pt. 1836 >= 6.0 stdevs above mean at 0.707.  (no action taken)
     B1      X, Y, Z:  199.65  224.68  78.35
2.4  Seg length ending at pt. 1837 >= 6.0 stdevs above mean at 0.6807.  (no action taken)
     B1      X, Y, Z:  199.62  224.69  79.03
2.5  Seg length ending at pt. 1984 <= 0.1 at 0.0949.  (removed)
     A       X, Y, Z:  193.79  232.2  77.94
2.5  Seg length ending at pt. 2044 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  187.4  213.94  59.28
2.5  Seg length ending at pt. 2115 <= 0.1 at 0.0812.  (removed)
     A       X, Y, Z:  193.85  222.61  59.12
2.5  Seg length ending at pt. 2450 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  187.4  213.94  59.28
2.5  Seg length ending at pt. 2454 <= 0.1 at 0.0283.  (removed)
     A       X, Y, Z:  187.72  213.6  59.58
2.5  Seg length ending at pt. 2639 <= 0.1 at 0.0917.  (removed)
     A       X, Y, Z:  198.79  190.26  45.38
2.5  Seg length ending at pt. 2766 <= 0.1 at 0.0283.  (removed)
     A       X, Y, Z:  187.72  213.6  59.58
2.6  Line 1 and line 1032 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  187.4  213.94  59.28
2.6  Line 7 and line 884 have the same coordinates.  (second line removed)
     A      X, Y, Z:  186.96  214.43  59.33
2.6  Line 66 and line 717 have the same coordinates.  (second line removed)
     A      X, Y, Z:  178.52  216.68  63.11
2.6  Line 187 and line 423 have the same coordinates.  (second line removed)
     A      X, Y, Z:  160.78  216.23  69.68
2.6  Line 321 and line 397 have the same coordinates.  (second line removed)
     A      X, Y, Z:  141.1  212.79  64.64
2.6  Line 344 and line 352 have the same coordinates.  (second line removed)
     A      X, Y, Z:  137.85  211.65  62.72
2.6  Line 642 and line 679 have the same coordinates.  (second line removed)
     A      X, Y, Z:  150.85  229.56  77.84
2.6  Line 766 and line 853 have the same coordinates.  (second line removed)
     A      X, Y, Z:  174.15  222.91  66.27
2.6  Line 1120 and line 1652 have the same coordinates.  (second line removed)
     A      X, Y, Z:  197.55  205.52  62.78
2.6  Line 1153 and line 1370 have the same coordinates.  (second line removed)
     A      X, Y, Z:  202.55  205.5  64.2
2.6  Line 1245 and line 1350 have the same coordinates.  (second line removed)
     A      X, Y, Z:  215.93  207.0  71.32
2.6  Line 1589 and line 1609 have the same coordinates.  (second line removed)
     A      X, Y, Z:  226.66  194.22  78.69
2.6  Line 1723 and line 1841 have the same coordinates.  (second line removed)
     A      X, Y, Z:  196.25  216.45  66.27
2.6  Line 1798 and line 1839 have the same coordinates.  (second line removed)
     A      X, Y, Z:  200.92  226.15  70.35
2.6  Line 1820 and line 1835 have the same coordinates.  (second line removed)
     A      X, Y, Z:  199.81  224.9  76.95
2.6  Line 1913 and line 1917 have the same coordinates.  (second line removed)
     A      X, Y, Z:  188.87  223.4  73.84
2.6  Line 1985 and line 2013 have the same coordinates.  (second line removed)
     A      X, Y, Z:  193.79  232.28  77.99
2.6  Line 2116 and line 2434 have the same coordinates.  (second line removed)
     A      X, Y, Z:  193.88  222.67  59.11
2.6  Line 2269 and line 2390 have the same coordinates.  (second line removed)
     A      X, Y, Z:  190.39  245.09  68.49
2.6  Line 2317 and line 2367 have the same coordinates.  (second line removed)
     A      X, Y, Z:  191.43  252.19  74.88
2.6  Line 2640 and line 2698 have the same coordinates.  (second line removed)
     A      X, Y, Z:  198.87  190.22  45.36
4.4  Line 3 of rad 1.50016 links to 1 of rad 0.67.  (no action taken)
     B1      X, Y, Z:  187.35  214.06  59.31
4.4  Line 978 of rad 1.39231 links to 977 of rad 0.67.  (no action taken)
     B1      X, Y, Z:  178.15  225.63  60.13
4.4  Line 1033 of rad 1.76043 links to 1032 of rad 0.67.  (no action taken)
     B1      X, Y, Z:  187.6  213.86  59.43
4.4  Line 2045 of rad 2.03613 links to 1 of rad 0.67.  (no action taken)
     B1      X, Y, Z:  187.65  214.03  59.36
2.1  Line 1 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  187.4  213.94  59.28
 
 


Number of type A irregularities = 42
Number of type B1 irregularities = 16
Number of type B2 irregularities = 0
Number of type C irregularities = 0
