# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\223417-6mo-GFAP-IFN-20x-cerebellum-iba1-1.swc.swc created with StdSwc version 1.31 on 5/20/22.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\223417-6mo-GFAP-IFN-20x-cerebellum-iba1-1.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  196.18  146.93  59.99
4.3  Radius of line 135 at 2.94094 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  195.84  148.8  60.79
4.3  Radius of line 136 at 2.96012 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  195.7  149.18  60.94
2.5  Seg length ending at pt. 2 <= 0.1 at 0.0728.  (removed)
     A       X, Y, Z:  196.18  147.0  60.01
2.5  Seg length ending at pt. 946 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  196.18  146.93  59.99
2.5  Seg length ending at pt. 1078 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  196.18  146.93  59.99
2.6  Line 1 and line 397 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  196.18  146.93  59.99
2.6  Line 1 and line 812 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  196.18  146.93  59.99
2.6  Line 7 and line 134 have the same coordinates.  (second line removed)
     A      X, Y, Z:  196.05  147.95  60.42
2.6  Line 34 and line 127 have the same coordinates.  (second line removed)
     A      X, Y, Z:  197.96  155.54  65.32
2.6  Line 166 and line 312 have the same coordinates.  (second line removed)
     A      X, Y, Z:  190.21  156.34  63.48
2.6  Line 197 and line 306 have the same coordinates.  (second line removed)
     A      X, Y, Z:  187.49  165.05  64.6
2.6  Line 209 and line 299 have the same coordinates.  (second line removed)
     A      X, Y, Z:  187.41  168.51  65.17
2.6  Line 243 and line 289 have the same coordinates.  (second line removed)
     A      X, Y, Z:  191.59  177.67  67.78
2.6  Line 251 and line 277 have the same coordinates.  (second line removed)
     A      X, Y, Z:  193.0  179.31  68.12
2.6  Line 361 and line 393 have the same coordinates.  (second line removed)
     A      X, Y, Z:  191.25  168.85  77.45
2.6  Line 397 and line 812 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  196.18  146.93  59.99
2.6  Line 418 and line 703 have the same coordinates.  (second line removed)
     A      X, Y, Z:  202.27  145.96  60.21
2.6  Line 424 and line 577 have the same coordinates.  (second line removed)
     A      X, Y, Z:  203.7  145.33  60.62
2.6  Line 450 and line 555 have the same coordinates.  (second line removed)
     A      X, Y, Z:  211.37  145.04  61.81
2.6  Line 458 and line 514 have the same coordinates.  (second line removed)
     A      X, Y, Z:  213.43  145.78  62.34
2.6  Line 478 and line 493 have the same coordinates.  (second line removed)
     A      X, Y, Z:  219.05  147.9  62.48
2.6  Line 640 and line 691 have the same coordinates.  (second line removed)
     A      X, Y, Z:  213.83  130.81  48.98
2.6  Line 777 and line 793 have the same coordinates.  (second line removed)
     A      X, Y, Z:  215.49  161.03  45.17
2.6  Line 815 and line 908 have the same coordinates.  (second line removed)
     A      X, Y, Z:  196.42  146.27  59.52
2.6  Line 844 and line 884 have the same coordinates.  (second line removed)
     A      X, Y, Z:  200.31  138.37  58.27
2.6  Line 989 and line 1077 have the same coordinates.  (second line removed)
     A      X, Y, Z:  189.44  136.68  51.78
2.6  Line 1107 and line 1795 have the same coordinates.  (second line removed)
     A      X, Y, Z:  187.46  145.16  59.05
2.6  Line 1117 and line 1539 have the same coordinates.  (second line removed)
     A      X, Y, Z:  184.51  145.36  58.87
2.6  Line 1147 and line 1464 have the same coordinates.  (second line removed)
     A      X, Y, Z:  177.15  140.61  60.35
2.6  Line 1174 and line 1280 have the same coordinates.  (second line removed)
     A      X, Y, Z:  170.51  137.08  56.68
2.6  Line 1203 and line 1264 have the same coordinates.  (second line removed)
     A      X, Y, Z:  164.03  131.56  56.95
2.6  Line 1362 and line 1393 have the same coordinates.  (second line removed)
     A      X, Y, Z:  148.47  144.67  42.38
2.6  Line 1423 and line 1449 have the same coordinates.  (second line removed)
     A      X, Y, Z:  144.99  135.52  42.99
2.6  Line 1544 and line 1640 have the same coordinates.  (second line removed)
     A      X, Y, Z:  183.64  145.46  54.9
2.6  Line 1662 and line 1791 have the same coordinates.  (second line removed)
     A      X, Y, Z:  181.53  152.0  53.27
2.6  Line 1735 and line 1768 have the same coordinates.  (second line removed)
     A      X, Y, Z:  177.49  172.31  46.64
4.4  Line 3 of rad 1.50679 links to 1 of rad 0.74348.  (no action taken)
     B1      X, Y, Z:  196.17  147.07  60.04
2.1  Line 1 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  196.18  146.93  59.99
 
 


Number of type A irregularities = 31
Number of type B1 irregularities = 8
Number of type B2 irregularities = 0
Number of type C irregularities = 0
