# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\221505-6mo-GFAP-IFN-20x-cerebellum-iba1-4.swc.swc created with StdSwc version 1.31 on 5/20/22.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\221505-6mo-GFAP-IFN-20x-cerebellum-iba1-4.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  87.46  85.91  31.18
2.4  Seg length ending at pt. 619 >= 6.0 stdevs above mean at 1.4535.  (no action taken)
     B1      X, Y, Z:  99.74  97.74  40.98
2.4  Seg length ending at pt. 620 >= 6.0 stdevs above mean at 1.4297.  (no action taken)
     B1      X, Y, Z:  100.12  98.95  40.32
2.4  Seg length ending at pt. 621 >= 6.0 stdevs above mean at 1.4067.  (no action taken)
     B1      X, Y, Z:  100.57  100.15  39.74
2.4  Seg length ending at pt. 622 >= 6.0 stdevs above mean at 1.4064.  (no action taken)
     B1      X, Y, Z:  101.1  101.34  39.21
2.5  Seg length ending at pt. 972 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  91.98  87.77  31.8
2.5  Seg length ending at pt. 995 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  87.46  85.91  31.18
2.5  Seg length ending at pt. 1272 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  86.98  86.01  31.13
2.5  Seg length ending at pt. 1376 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  86.68  86.1  31.68
2.6  Line 1 and line 70 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  87.46  85.91  31.18
2.6  Line 1 and line 103 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  87.46  85.91  31.18
2.6  Line 70 and line 103 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  87.46  85.91  31.18
2.6  Line 119 and line 897 have the same coordinates.  (second line removed)
     A      X, Y, Z:  92.19  87.39  31.6
2.6  Line 129 and line 624 have the same coordinates.  (second line removed)
     A      X, Y, Z:  94.84  87.88  32.85
2.6  Line 137 and line 360 have the same coordinates.  (second line removed)
     A      X, Y, Z:  96.89  88.32  34.11
2.6  Line 205 and line 314 have the same coordinates.  (second line removed)
     A      X, Y, Z:  114.34  77.98  43.1
2.6  Line 227 and line 236 have the same coordinates.  (second line removed)
     A      X, Y, Z:  120.73  75.89  44.66
2.6  Line 246 and line 296 have the same coordinates.  (second line removed)
     A      X, Y, Z:  123.57  73.83  42.35
2.6  Line 265 and line 270 have the same coordinates.  (second line removed)
     A      X, Y, Z:  128.47  72.56  39.07
2.6  Line 389 and line 619 have the same coordinates.  (second line removed)
     A      X, Y, Z:  99.4  96.53  41.71
2.6  Line 414 and line 595 have the same coordinates.  (second line removed)
     A      X, Y, Z:  103.51  102.42  44.73
2.6  Line 431 and line 568 have the same coordinates.  (second line removed)
     A      X, Y, Z:  107.72  104.95  47.91
2.6  Line 434 and line 555 have the same coordinates.  (second line removed)
     A      X, Y, Z:  107.96  105.25  48.6
2.6  Line 452 and line 499 have the same coordinates.  (second line removed)
     A      X, Y, Z:  109.83  110.26  52.58
2.6  Line 665 and line 712 have the same coordinates.  (second line removed)
     A      X, Y, Z:  99.91  75.67  31.99
2.6  Line 798 and line 813 have the same coordinates.  (second line removed)
     A      X, Y, Z:  117.0  56.5  29.34
2.6  Line 842 and line 885 have the same coordinates.  (second line removed)
     A      X, Y, Z:  126.09  56.25  28.86
2.6  Line 864 and line 883 have the same coordinates.  (second line removed)
     A      X, Y, Z:  129.13  50.47  29.08
2.6  Line 996 and line 1096 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  86.98  86.01  31.13
2.6  Line 1144 and line 1217 have the same coordinates.  (second line removed)
     A      X, Y, Z:  83.97  74.57  19.15
2.6  Line 1252 and line 1266 have the same coordinates.  (second line removed)
     A      X, Y, Z:  94.47  77.05  12.02
2.6  Line 1325 and line 1371 have the same coordinates.  (second line removed)
     A      X, Y, Z:  72.47  82.08  40.46
2.6  Line 1420 and line 1521 have the same coordinates.  (second line removed)
     A      X, Y, Z:  89.72  76.44  42.32
2.6  Line 1436 and line 1471 have the same coordinates.  (second line removed)
     A      X, Y, Z:  92.09  72.27  42.5
4.4  Line 104 of rad 1.5799 links to 103 of rad 0.667505.  (no action taken)
     B1      X, Y, Z:  87.74  86.26  31.17
 
 


Number of type A irregularities = 25
Number of type B1 irregularities = 10
Number of type B2 irregularities = 0
Number of type C irregularities = 0
