# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\221505-6mo-GFAP-IFN-20x-cerebellum-iba1-3_4.swc.swc created with StdSwc version 1.31 on 5/20/22.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\221505-6mo-GFAP-IFN-20x-cerebellum-iba1-3_4.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  248.78  239.5  83.97
4.5  Radius of terminal line 92 at 0.667505 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  255.74  219.07  69.42
4.5  Radius of terminal line 110 at 0.667505 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  260.08  218.6  77.07
4.5  Radius of terminal line 183 at 0.667505 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  260.05  229.94  63.31
4.5  Radius of terminal line 274 at 0.667505 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  225.74  249.12  97.33
4.5  Radius of terminal line 276 at 0.667505 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  234.91  241.38  94.01
4.5  Radius of terminal line 300 at 0.667505 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  229.96  238.59  96.7
4.5  Radius of terminal line 347 at 0.667505 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  254.79  234.67  105.0
4.5  Radius of terminal line 426 at 0.667505 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  240.77  221.1  90.47
4.5  Radius of terminal line 535 at 0.667505 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  230.61  212.86  80.32
4.5  Radius of terminal line 561 at 0.667505 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  248.44  227.4  76.54
4.5  Radius of terminal line 649 at 0.667505 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  246.63  249.56  67.09
4.5  Radius of terminal line 651 at 0.667505 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  251.92  244.63  80.32
4.5  Radius of terminal line 746 at 0.667505 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  264.45  261.13  94.81
4.5  Radius of terminal line 761 at 0.667505 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  256.51  247.02  97.35
4.5  Radius of terminal line 796 at 0.667505 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  263.09  247.11  79.06
4.5  Radius of terminal line 805 at 0.667505 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  255.88  242.03  92.82
4.5  Radius of terminal line 943 at 0.667505 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  230.43  261.5  63.72
4.5  Radius of terminal line 962 at 0.667505 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  224.69  250.95  59.86
4.5  Radius of terminal line 1024 at 0.667505 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  211.7  245.77  78.43
4.5  Radius of terminal line 1035 at 0.667505 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  216.67  242.8  73.39
4.5  Radius of terminal line 1064 at 0.667505 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  247.46  235.1  66.01
4.5  Radius of terminal line 1167 at 0.667505 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  227.81  259.64  88.99
4.5  Radius of terminal line 1188 at 0.667505 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  230.15  252.46  75.27
4.5  Radius of terminal line 1250 at 0.667505 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  223.47  238.88  82.84
4.5  Radius of terminal line 1269 at 0.667505 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  245.49  246.68  90.11
4.5  Radius of terminal line 1292 at 0.667505 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  245.53  243.6  69.98
2.5  Seg length ending at pt. 2 <= 0.1 at 0.0616.  (removed)
     A       X, Y, Z:  248.8  239.47  83.92
2.4  Seg length ending at pt. 185 >= 6.0 stdevs above mean at 1.1685.  (no action taken)
     B1      X, Y, Z:  248.36  239.65  85.05
2.5  Seg length ending at pt. 536 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  243.35  232.96  80.35
2.5  Seg length ending at pt. 652 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  248.78  239.5  83.97
2.5  Seg length ending at pt. 806 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  248.78  239.5  83.97
2.5  Seg length ending at pt. 1065 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  248.43  239.77  83.05
2.6  Line 1 and line 184 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  248.78  239.5  83.97
2.6  Line 1 and line 348 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  248.78  239.5  83.97
2.6  Line 1 and line 562 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  248.78  239.5  83.97
2.6  Line 32 and line 112 have the same coordinates.  (second line removed)
     A      X, Y, Z:  251.65  231.97  80.73
2.6  Line 70 and line 94 have the same coordinates.  (second line removed)
     A      X, Y, Z:  255.98  221.57  79.57
2.6  Line 184 and line 348 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  248.78  239.5  83.97
2.6  Line 184 and line 562 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  248.78  239.5  83.97
2.6  Line 190 and line 302 have the same coordinates.  (second line removed)
     A      X, Y, Z:  247.44  239.97  87.23
2.6  Line 231 and line 278 have the same coordinates.  (second line removed)
     A      X, Y, Z:  235.76  241.02  93.95
2.6  Line 234 and line 276 have the same coordinates.  (second line removed)
     A      X, Y, Z:  235.11  241.33  94.06
2.6  Line 348 and line 562 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  248.78  239.5  83.97
2.6  Line 375 and line 428 have the same coordinates.  (second line removed)
     A      X, Y, Z:  243.54  233.16  80.78
2.6  Line 582 and line 651 have the same coordinates.  (second line removed)
     A      X, Y, Z:  252.01  244.43  80.53
2.6  Line 675 and line 798 have the same coordinates.  (second line removed)
     A      X, Y, Z:  254.33  243.34  89.07
2.6  Line 684 and line 763 have the same coordinates.  (second line removed)
     A      X, Y, Z:  255.66  245.44  88.9
2.6  Line 687 and line 748 have the same coordinates.  (second line removed)
     A      X, Y, Z:  255.85  246.05  89.28
2.6  Line 818 and line 1037 have the same coordinates.  (second line removed)
     A      X, Y, Z:  247.43  239.97  77.37
2.6  Line 889 and line 964 have the same coordinates.  (second line removed)
     A      X, Y, Z:  228.55  248.18  69.32
2.6  Line 894 and line 945 have the same coordinates.  (second line removed)
     A      X, Y, Z:  227.64  248.87  68.35
2.6  Line 1000 and line 1026 have the same coordinates.  (second line removed)
     A      X, Y, Z:  218.33  245.35  75.49
2.6  Line 1079 and line 1271 have the same coordinates.  (second line removed)
     A      X, Y, Z:  245.64  243.11  82.23
2.6  Line 1089 and line 1252 have the same coordinates.  (second line removed)
     A      X, Y, Z:  243.1  244.08  83.56
2.6  Line 1098 and line 1190 have the same coordinates.  (second line removed)
     A      X, Y, Z:  240.61  244.45  84.05
2.6  Line 1145 and line 1169 have the same coordinates.  (second line removed)
     A      X, Y, Z:  230.76  253.74  87.13
2.1  Line 1 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  248.78  239.5  83.97
 
 


Number of type A irregularities = 23
Number of type B1 irregularities = 35
Number of type B2 irregularities = 0
Number of type C irregularities = 0
