# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\221505-6mo-GFAP-IFN-20x-cerebellum-iba1-3_1.swc.swc created with StdSwc version 1.31 on 5/20/22.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\221505-6mo-GFAP-IFN-20x-cerebellum-iba1-3_1.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  93.85  139.81  57.01
2.5  Seg length ending at pt. 2 <= 0.1 at 0.0806.  (removed)
     A       X, Y, Z:  93.92  139.77  57.01
2.5  Seg length ending at pt. 272 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  113.57  141.16  51.28
2.4  Seg length ending at pt. 604 >= 6.0 stdevs above mean at 0.9721.  (no action taken)
     B1      X, Y, Z:  91.09  161.8  65.26
2.5  Seg length ending at pt. 793 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  93.85  139.81  57.01
2.5  Seg length ending at pt. 1290 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  94.1  139.44  57.02
2.5  Seg length ending at pt. 1544 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  94.13  139.03  57.28
2.5  Seg length ending at pt. 1564 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  93.85  139.81  57.01
2.4  Seg length ending at pt. 1692 >= 6.0 stdevs above mean at 1.4628.  (no action taken)
     B1      X, Y, Z:  80.59  139.71  50.08
2.5  Seg length ending at pt. 1893 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  93.47  139.99  57.1
2.6  Line 1 and line 392 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  93.85  139.81  57.01
2.6  Line 53 and line 288 have the same coordinates.  (second line removed)
     A      X, Y, Z:  108.81  140.47  54.64
2.6  Line 69 and line 122 have the same coordinates.  (second line removed)
     A      X, Y, Z:  113.18  139.99  52.21
2.6  Line 124 and line 165 have the same coordinates.  (second line removed)
     A      X, Y, Z:  113.44  140.79  51.31
2.6  Line 349 and line 379 have the same coordinates.  (second line removed)
     A      X, Y, Z:  111.72  158.51  61.93
2.6  Line 427 and line 710 have the same coordinates.  (second line removed)
     A      X, Y, Z:  87.95  149.16  59.21
2.6  Line 442 and line 612 have the same coordinates.  (second line removed)
     A      X, Y, Z:  88.85  153.74  59.43
2.6  Line 472 and line 604 have the same coordinates.  (second line removed)
     A      X, Y, Z:  90.89  161.6  64.33
2.6  Line 484 and line 586 have the same coordinates.  (second line removed)
     A      X, Y, Z:  89.11  164.64  64.73
2.6  Line 532 and line 564 have the same coordinates.  (second line removed)
     A      X, Y, Z:  86.95  176.68  57.36
2.6  Line 614 and line 664 have the same coordinates.  (second line removed)
     A      X, Y, Z:  88.52  154.5  58.28
2.6  Line 754 and line 780 have the same coordinates.  (second line removed)
     A      X, Y, Z:  74.43  151.81  66.0
2.6  Line 794 and line 1229 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  94.1  139.44  57.02
2.6  Line 825 and line 1054 have the same coordinates.  (second line removed)
     A      X, Y, Z:  102.22  134.99  57.62
2.6  Line 886 and line 987 have the same coordinates.  (second line removed)
     A      X, Y, Z:  119.01  128.51  58.41
2.6  Line 1094 and line 1100 have the same coordinates.  (second line removed)
     A      X, Y, Z:  111.76  133.77  72.41
2.6  Line 1136 and line 1186 have the same coordinates.  (second line removed)
     A      X, Y, Z:  119.8  141.96  70.46
2.6  Line 1323 and line 1382 have the same coordinates.  (second line removed)
     A      X, Y, Z:  95.66  131.31  64.65
2.6  Line 1360 and line 1373 have the same coordinates.  (second line removed)
     A      X, Y, Z:  97.19  121.66  73.58
2.6  Line 1394 and line 1449 have the same coordinates.  (second line removed)
     A      X, Y, Z:  92.53  130.53  60.22
2.6  Line 1599 and line 1783 have the same coordinates.  (second line removed)
     A      X, Y, Z:  83.31  139.52  54.11
2.6  Line 1607 and line 1694 have the same coordinates.  (second line removed)
     A      X, Y, Z:  81.06  139.62  53.09
2.6  Line 1613 and line 1692 have the same coordinates.  (second line removed)
     A      X, Y, Z:  80.03  139.65  51.43
2.6  Line 1629 and line 1688 have the same coordinates.  (second line removed)
     A      X, Y, Z:  75.33  140.88  48.68
2.6  Line 1704 and line 1715 have the same coordinates.  (second line removed)
     A      X, Y, Z:  79.84  138.55  59.55
2.6  Line 1806 and line 1870 have the same coordinates.  (second line removed)
     A      X, Y, Z:  83.66  134.62  47.53
2.6  Line 1818 and line 1841 have the same coordinates.  (second line removed)
     A      X, Y, Z:  83.7  131.43  47.17
2.6  Line 1909 and line 1925 have the same coordinates.  (second line removed)
     A      X, Y, Z:  94.03  142.46  49.38
4.4  Line 794 of rad 2.0432 links to 1 of rad 0.667505.  (no action taken)
     B1      X, Y, Z:  94.1  139.44  57.02
2.1  Line 1 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  93.85  139.81  57.01
 
 


Number of type A irregularities = 33
Number of type B1 irregularities = 7
Number of type B2 irregularities = 0
Number of type C irregularities = 0
