# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\218214-6mo-WT-20x-cerebellum-Iba1-5_1.swc.swc created with StdSwc version 1.31 on 5/20/22.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\218214-6mo-WT-20x-cerebellum-Iba1-5_1.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  105.35  104.76  40.82
2.4  Seg length ending at pt. 352 >= 6.0 stdevs above mean at 1.7426.  (no action taken)
     B1      X, Y, Z:  80.49  118.75  28.85
2.5  Seg length ending at pt. 366 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  105.35  104.76  40.82
2.5  Seg length ending at pt. 477 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  122.23  115.37  28.52
2.7  Line 478 of rad 0.79206 is an included side branch.  (removed)
     A      X, Y, Z:  122.4  115.02  28.42
2.6  Line 1 and line 79 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  105.35  104.76  40.82
2.6  Line 1 and line 180 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  105.35  104.76  40.82
2.6  Line 79 and line 180 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  105.35  104.76  40.82
2.6  Line 83 and line 154 have the same coordinates.  (second line removed)
     A      X, Y, Z:  106.11  105.64  43.03
2.6  Line 118 and line 149 have the same coordinates.  (second line removed)
     A      X, Y, Z:  94.83  93.82  50.42
2.6  Line 144 and line 147 have the same coordinates.  (second line removed)
     A      X, Y, Z:  95.55  82.65  59.72
2.6  Line 195 and line 360 have the same coordinates.  (second line removed)
     A      X, Y, Z:  101.3  112.16  37.17
2.6  Line 200 and line 307 have the same coordinates.  (second line removed)
     A      X, Y, Z:  99.69  114.07  37.32
2.6  Line 218 and line 304 have the same coordinates.  (second line removed)
     A      X, Y, Z:  97.68  122.45  31.88
2.6  Line 251 and line 297 have the same coordinates.  (second line removed)
     A      X, Y, Z:  92.16  140.95  33.62
2.6  Line 272 and line 288 have the same coordinates.  (second line removed)
     A      X, Y, Z:  88.68  152.2  35.68
2.6  Line 275 and line 284 have the same coordinates.  (second line removed)
     A      X, Y, Z:  88.52  153.4  35.99
2.6  Line 329 and line 354 have the same coordinates.  (second line removed)
     A      X, Y, Z:  86.85  114.52  33.46
2.6  Line 344 and line 352 have the same coordinates.  (second line removed)
     A      X, Y, Z:  81.87  119.56  28.16
2.6  Line 385 and line 480 have the same coordinates.  (second line removed)
     A      X, Y, Z:  99.8  106.94  29.81
2.6  Line 430 and line 460 have the same coordinates.  (second line removed)
     A      X, Y, Z:  122.08  115.73  28.63
2.6  Line 465 and line 476 have the same coordinates.  (second line removed)
     A      X, Y, Z:  123.9  112.41  27.06
2.6  Line 495 and line 513 have the same coordinates.  (second line removed)
     A      X, Y, Z:  99.94  98.14  24.4
2.6  Line 534 and line 538 have the same coordinates.  (second line removed)
     A      X, Y, Z:  96.63  105.22  12.44
4.4  Line 2 of rad 1.85688 links to 1 of rad 0.67.  (no action taken)
     B1      X, Y, Z:  105.46  104.56  40.77
4.4  Line 471 of rad 1.52927 links to 470 of rad 0.67.  (no action taken)
     B1      X, Y, Z:  127.79  113.22  25.02
 
 


Number of type A irregularities = 19
Number of type B1 irregularities = 7
Number of type B2 irregularities = 0
Number of type C irregularities = 0
