# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\216926-6mo-GFAP-IFN-20x-cerebellum-iba1-3_5.swc.swc created with StdSwc version 1.31 on 5/20/22.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\216926-6mo-GFAP-IFN-20x-cerebellum-iba1-3_5.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  258.16  224.36  29.46
4.3  Radius of line 1560 at 2.85421 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  257.93  223.47  29.42
4.3  Radius of line 1561 at 3.09799 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  257.75  223.09  29.39
4.3  Radius of line 1562 at 3.2126 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  257.54  222.78  29.34
4.3  Radius of line 1563 at 3.12942 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  257.31  222.52  29.28
4.3  Radius of line 1564 at 2.92922 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  257.06  222.29  29.24
4.3  Radius of line 1565 at 2.70189 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  256.79  222.09  29.24
2.5  Seg length ending at pt. 1545 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  293.28  205.04  47.99
2.5  Seg length ending at pt. 1547 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  271.05  228.97  39.45
2.5  Seg length ending at pt. 1558 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  258.16  224.36  29.46
2.5  Seg length ending at pt. 1866 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  258.06  223.9  29.45
2.7  Line 1546 of rad 0.67 is an included side branch.  (removed)
     A      X, Y, Z:  293.09  204.57  47.71
2.6  Line 1 and line 353 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  258.16  224.36  29.46
2.6  Line 6 and line 279 have the same coordinates.  (second line removed)
     A      X, Y, Z:  257.19  224.85  31.04
2.6  Line 71 and line 179 have the same coordinates.  (second line removed)
     A      X, Y, Z:  244.55  236.01  30.95
2.6  Line 101 and line 150 have the same coordinates.  (second line removed)
     A      X, Y, Z:  235.53  235.85  30.68
2.6  Line 200 and line 272 have the same coordinates.  (second line removed)
     A      X, Y, Z:  246.61  242.39  29.7
2.6  Line 229 and line 267 have the same coordinates.  (second line removed)
     A      X, Y, Z:  247.14  250.98  29.84
2.6  Line 327 and line 343 have the same coordinates.  (second line removed)
     A      X, Y, Z:  254.09  233.47  54.58
2.6  Line 404 and line 421 have the same coordinates.  (second line removed)
     A      X, Y, Z:  270.76  228.94  39.24
2.6  Line 438 and line 588 have the same coordinates.  (second line removed)
     A      X, Y, Z:  276.06  230.83  39.87
2.6  Line 516 and line 564 have the same coordinates.  (second line removed)
     A      X, Y, Z:  288.59  247.99  27.65
2.6  Line 592 and line 1109 have the same coordinates.  (second line removed)
     A      X, Y, Z:  276.98  231.33  42.16
2.6  Line 613 and line 875 have the same coordinates.  (second line removed)
     A      X, Y, Z:  280.29  237.07  43.58
2.6  Line 660 and line 813 have the same coordinates.  (second line removed)
     A      X, Y, Z:  291.72  245.4  42.56
2.6  Line 729 and line 754 have the same coordinates.  (second line removed)
     A      X, Y, Z:  298.86  265.2  43.06
2.6  Line 771 and line 786 have the same coordinates.  (second line removed)
     A      X, Y, Z:  298.73  268.09  33.73
2.6  Line 800 and line 811 have the same coordinates.  (second line removed)
     A      X, Y, Z:  298.79  272.82  33.83
2.6  Line 902 and line 1096 have the same coordinates.  (second line removed)
     A      X, Y, Z:  274.5  242.6  47.83
2.6  Line 919 and line 1085 have the same coordinates.  (second line removed)
     A      X, Y, Z:  269.67  243.59  46.57
2.6  Line 932 and line 1055 have the same coordinates.  (second line removed)
     A      X, Y, Z:  268.5  247.39  46.35
2.6  Line 975 and line 1035 have the same coordinates.  (second line removed)
     A      X, Y, Z:  257.31  252.75  42.02
2.6  Line 981 and line 1008 have the same coordinates.  (second line removed)
     A      X, Y, Z:  256.43  253.8  40.92
2.6  Line 1215 and line 1387 have the same coordinates.  (second line removed)
     A      X, Y, Z:  293.46  205.52  48.27
2.6  Line 1291 and line 1363 have the same coordinates.  (second line removed)
     A      X, Y, Z:  303.89  186.48  50.99
2.6  Line 1414 and line 1541 have the same coordinates.  (second line removed)
     A      X, Y, Z:  296.07  199.41  37.6
2.6  Line 1445 and line 1520 have the same coordinates.  (second line removed)
     A      X, Y, Z:  297.16  191.22  33.06
2.6  Line 1471 and line 1504 have the same coordinates.  (second line removed)
     A      X, Y, Z:  303.27  187.72  27.59
2.6  Line 1582 and line 1737 have the same coordinates.  (second line removed)
     A      X, Y, Z:  252.34  219.6  29.22
2.6  Line 1605 and line 1724 have the same coordinates.  (second line removed)
     A      X, Y, Z:  248.46  215.43  22.32
2.6  Line 1638 and line 1659 have the same coordinates.  (second line removed)
     A      X, Y, Z:  241.8  212.65  8.78
2.6  Line 1783 and line 1797 have the same coordinates.  (second line removed)
     A      X, Y, Z:  241.15  218.34  42.75
2.6  Line 1888 and line 2011 have the same coordinates.  (second line removed)
     A      X, Y, Z:  262.13  218.65  29.24
2.6  Line 1992 and line 2009 have the same coordinates.  (second line removed)
     A      X, Y, Z:  275.35  193.0  15.87
2.6  Line 2062 and line 2127 have the same coordinates.  (second line removed)
     A      X, Y, Z:  271.03  207.57  39.62
4.4  Line 2 of rad 1.66573 links to 1 of rad 0.67.  (no action taken)
     B1      X, Y, Z:  258.01  224.41  29.78
4.4  Line 611 of rad 1.38068 links to 610 of rad 0.67.  (no action taken)
     B1      X, Y, Z:  279.95  236.74  43.58
4.4  Line 1559 of rad 2.17427 links to 1 of rad 0.67.  (no action taken)
     B1      X, Y, Z:  258.06  223.9  29.45
4.4  Line 1686 of rad 1.52196 links to 1685 of rad 0.67.  (no action taken)
     B1      X, Y, Z:  243.2  204.46  7.02
 
 


Number of type A irregularities = 37
Number of type B1 irregularities = 12
Number of type B2 irregularities = 0
Number of type C irregularities = 0
