# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\216926-6mo-GFAP-IFN-20x-cerebellum-iba1-3_2.swc.swc created with StdSwc version 1.31 on 5/20/22.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\216926-6mo-GFAP-IFN-20x-cerebellum-iba1-3_2.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  164.89  142.67  59.28
2.5  Seg length ending at pt. 959 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  164.89  142.67  59.28
2.5  Seg length ending at pt. 1017 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  165.43  142.4  59.07
2.4  Seg length ending at pt. 1463 >= 6.0 stdevs above mean at 3.3675.  (no action taken)
     B1      X, Y, Z:  168.31  132.25  54.71
2.4  Seg length ending at pt. 1464 >= 6.0 stdevs above mean at 3.218.  (no action taken)
     B1      X, Y, Z:  169.02  129.7  56.54
2.4  Seg length ending at pt. 1465 >= 6.0 stdevs above mean at 2.9594.  (no action taken)
     B1      X, Y, Z:  169.71  127.22  58.0
2.4  Seg length ending at pt. 1466 >= 6.0 stdevs above mean at 2.7479.  (no action taken)
     B1      X, Y, Z:  170.39  124.8  59.11
2.4  Seg length ending at pt. 1467 >= 6.0 stdevs above mean at 2.6213.  (no action taken)
     B1      X, Y, Z:  171.02  122.42  60.01
2.5  Seg length ending at pt. 1745 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  165.9  142.14  58.79
2.6  Line 1 and line 385 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  164.89  142.67  59.28
2.6  Line 5 and line 317 have the same coordinates.  (second line removed)
     A      X, Y, Z:  164.43  142.06  59.94
2.6  Line 56 and line 278 have the same coordinates.  (second line removed)
     A      X, Y, Z:  151.32  136.95  56.73
2.6  Line 65 and line 213 have the same coordinates.  (second line removed)
     A      X, Y, Z:  149.53  134.89  54.78
2.6  Line 105 and line 193 have the same coordinates.  (second line removed)
     A      X, Y, Z:  142.11  126.43  49.25
2.6  Line 133 and line 180 have the same coordinates.  (second line removed)
     A      X, Y, Z:  140.01  120.26  41.48
2.6  Line 252 and line 267 have the same coordinates.  (second line removed)
     A      X, Y, Z:  144.55  126.17  62.55
2.6  Line 302 and line 310 have the same coordinates.  (second line removed)
     A      X, Y, Z:  152.5  144.54  54.54
2.6  Line 422 and line 897 have the same coordinates.  (second line removed)
     A      X, Y, Z:  161.79  153.61  63.3
2.6  Line 425 and line 856 have the same coordinates.  (second line removed)
     A      X, Y, Z:  161.82  154.29  63.47
2.6  Line 430 and line 702 have the same coordinates.  (second line removed)
     A      X, Y, Z:  161.6  155.63  63.28
2.6  Line 468 and line 592 have the same coordinates.  (second line removed)
     A      X, Y, Z:  152.95  161.49  57.65
2.6  Line 495 and line 538 have the same coordinates.  (second line removed)
     A      X, Y, Z:  148.09  167.3  53.32
2.6  Line 612 and line 637 have the same coordinates.  (second line removed)
     A      X, Y, Z:  147.14  161.0  56.89
2.6  Line 671 and line 687 have the same coordinates.  (second line removed)
     A      X, Y, Z:  136.59  158.36  59.67
2.6  Line 754 and line 854 have the same coordinates.  (second line removed)
     A      X, Y, Z:  166.61  169.43  72.03
2.6  Line 777 and line 812 have the same coordinates.  (second line removed)
     A      X, Y, Z:  170.52  175.73  75.49
2.6  Line 918 and line 950 have the same coordinates.  (second line removed)
     A      X, Y, Z:  167.31  153.21  69.81
2.6  Line 1044 and line 1463 have the same coordinates.  (second line removed)
     A      X, Y, Z:  167.58  134.82  52.66
2.6  Line 1057 and line 1248 have the same coordinates.  (second line removed)
     A      X, Y, Z:  166.66  132.81  46.8
2.6  Line 1065 and line 1236 have the same coordinates.  (second line removed)
     A      X, Y, Z:  164.42  133.49  44.68
2.6  Line 1073 and line 1201 have the same coordinates.  (second line removed)
     A      X, Y, Z:  162.43  133.9  43.04
2.6  Line 1133 and line 1172 have the same coordinates.  (second line removed)
     A      X, Y, Z:  157.69  117.25  35.38
2.6  Line 1179 and line 1195 have the same coordinates.  (second line removed)
     A      X, Y, Z:  155.53  117.43  31.99
2.6  Line 1278 and line 1415 have the same coordinates.  (second line removed)
     A      X, Y, Z:  175.78  132.61  40.46
2.6  Line 1287 and line 1371 have the same coordinates.  (second line removed)
     A      X, Y, Z:  178.03  133.64  38.98
2.6  Line 1297 and line 1324 have the same coordinates.  (second line removed)
     A      X, Y, Z:  180.28  134.5  36.66
2.6  Line 1349 and line 1360 have the same coordinates.  (second line removed)
     A      X, Y, Z:  181.88  141.95  35.22
2.6  Line 1469 and line 1647 have the same coordinates.  (second line removed)
     A      X, Y, Z:  170.81  122.15  60.44
2.6  Line 1576 and line 1614 have the same coordinates.  (second line removed)
     A      X, Y, Z:  149.69  98.71  57.36
2.6  Line 1599 and line 1612 have the same coordinates.  (second line removed)
     A      X, Y, Z:  143.46  96.04  57.42
2.6  Line 1678 and line 1743 have the same coordinates.  (second line removed)
     A      X, Y, Z:  176.89  114.56  55.69
2.6  Line 1685 and line 1739 have the same coordinates.  (second line removed)
     A      X, Y, Z:  177.74  113.99  53.18
2.6  Line 1695 and line 1734 have the same coordinates.  (second line removed)
     A      X, Y, Z:  179.62  111.93  51.95
2.6  Line 1706 and line 1720 have the same coordinates.  (second line removed)
     A      X, Y, Z:  182.31  110.66  51.3
2.6  Line 1792 and line 2203 have the same coordinates.  (second line removed)
     A      X, Y, Z:  169.34  128.07  62.39
2.6  Line 1854 and line 2119 have the same coordinates.  (second line removed)
     A      X, Y, Z:  183.28  116.77  70.34
2.6  Line 1866 and line 1957 have the same coordinates.  (second line removed)
     A      X, Y, Z:  185.96  114.63  70.06
2.6  Line 1883 and line 1915 have the same coordinates.  (second line removed)
     A      X, Y, Z:  187.1  109.78  71.03
2.6  Line 1999 and line 2109 have the same coordinates.  (second line removed)
     A      X, Y, Z:  198.42  116.15  69.24
2.6  Line 2093 and line 2099 have the same coordinates.  (second line removed)
     A      X, Y, Z:  223.59  109.33  66.81
2.6  Line 2134 and line 2177 have the same coordinates.  (second line removed)
     A      X, Y, Z:  182.84  120.61  76.76
2.6  Line 2222 and line 2262 have the same coordinates.  (second line removed)
     A      X, Y, Z:  164.08  128.8  67.51
2.6  Line 2247 and line 2254 have the same coordinates.  (second line removed)
     A      X, Y, Z:  157.19  130.57  69.64
4.4  Line 961 of rad 1.88788 links to 960 of rad 0.67.  (no action taken)
     B1      X, Y, Z:  165.92  142.59  59.52
4.4  Line 1746 of rad 1.48343 links to 1018 of rad 0.67.  (no action taken)
     B1      X, Y, Z:  166.25  141.87  58.95
 
 


Number of type A irregularities = 46
Number of type B1 irregularities = 9
Number of type B2 irregularities = 0
Number of type C irregularities = 0
