# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\dLGN-A825-P11-KO-slice-3-cell1.swc.swc created with StdSwc version 1.31 on 8/2/22.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\dLGN-A825-P11-KO-slice-3-cell1.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.3  Radius of line 765 at 0.53085 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  33.75  11.19  0.8
4.3  Radius of line 766 at 0.563476 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  48.82  51.37  2.21
4.3  Radius of line 770 at 0.477133 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  46.82  51.55  2.24
4.3  Radius of line 1730 at 1.01383 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  52.07  52.52  2.42
4.3  Radius of line 1731 at 0.846789 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  52.55  53.42  2.52
4.3  Radius of line 1834 at 0.478641 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  52.7  54.26  2.49
2.4  Seg length ending at pt. 467 >= 6.0 stdevs above mean at 3.3592.  (no action taken)
     B1      X, Y, Z:  41.45  31.02  4.7
2.5  Seg length ending at pt. 610 <= 0.1 at 0.064.  (removed)
     A       X, Y, Z:  43.68  45.61  1.19
2.5  Seg length ending at pt. 644 <= 0.1 at 0.0806.  (removed)
     A       X, Y, Z:  40.47  40.81  1.6
2.5  Seg length ending at pt. 660 <= 0.1 at 0.0781.  (removed)
     A       X, Y, Z:  39.09  37.6  2.1
2.5  Seg length ending at pt. 690 <= 0.1 at 0.09.  (removed)
     A       X, Y, Z:  37.68  30.91  2.7
2.5  Seg length ending at pt. 755 <= 0.1 at 0.0894.  (removed)
     A       X, Y, Z:  36.2  11.31  1.6
2.4  Seg length ending at pt. 766 >= 6.0 stdevs above mean at 2.3176.  (no action taken)
     B1      X, Y, Z:  48.82  51.37  2.21
2.5  Seg length ending at pt. 972 <= 0.1 at 0.0806.  (removed)
     A       X, Y, Z:  35.6  41.79  1.3
2.5  Seg length ending at pt. 1043 <= 0.1 at 0.0806.  (removed)
     A       X, Y, Z:  33.4  54.62  2.1
2.5  Seg length ending at pt. 1083 <= 0.1 at 0.0825.  (removed)
     A       X, Y, Z:  33.0  54.59  2.1
2.4  Seg length ending at pt. 1106 >= 6.0 stdevs above mean at 2.4755.  (no action taken)
     B1      X, Y, Z:  24.6  52.0  1.6
2.4  Seg length ending at pt. 1387 >= 6.0 stdevs above mean at 2.7006.  (no action taken)
     B1      X, Y, Z:  13.22  54.58  2.7
2.5  Seg length ending at pt. 1417 <= 0.1 at 0.0922.  (removed)
     A       X, Y, Z:  36.11  61.51  1.0
2.5  Seg length ending at pt. 1504 <= 0.1 at 0.0806.  (removed)
     A       X, Y, Z:  44.79  66.09  2.2
2.4  Seg length ending at pt. 1551 >= 6.0 stdevs above mean at 3.1556.  (no action taken)
     B1      X, Y, Z:  45.1  78.09  1.19
2.4  Seg length ending at pt. 1730 >= 6.0 stdevs above mean at 2.3626.  (no action taken)
     B1      X, Y, Z:  52.07  52.52  2.42
2.5  Seg length ending at pt. 1886 <= 0.1 at 0.09.  (removed)
     A       X, Y, Z:  48.79  61.91  3.5
2.5  Seg length ending at pt. 1942 <= 0.1 at 0.0854.  (removed)
     A       X, Y, Z:  50.21  64.58  2.1
2.5  Seg length ending at pt. 1970 <= 0.1 at 0.0985.  (removed)
     A       X, Y, Z:  49.88  70.09  1.0
2.5  Seg length ending at pt. 2059 <= 0.1 at 0.0894.  (removed)
     A       X, Y, Z:  52.08  75.29  1.19
2.5  Seg length ending at pt. 2200 <= 0.1 at 0.0985.  (removed)
     A       X, Y, Z:  55.79  73.7  1.5
2.4  Seg length ending at pt. 2285 >= 6.0 stdevs above mean at 2.2731.  (no action taken)
     B1      X, Y, Z:  50.31  48.28  2.2
2.5  Seg length ending at pt. 2287 <= 0.1 at 0.0825.  (removed)
     A       X, Y, Z:  50.18  48.01  2.2
4.4  Line 53 of rad 0.296892 links to 52 of rad 0.125.  (no action taken)
     B1      X, Y, Z:  60.35  54.7  0.59
4.4  Line 125 of rad 0.323249 links to 124 of rad 0.145118.  (no action taken)
     B1      X, Y, Z:  53.31  38.91  0.8
4.4  Line 205 of rad 0.387574 links to 204 of rad 0.125.  (no action taken)
     B1      X, Y, Z:  61.89  48.09  0.4
4.4  Line 265 of rad 0.379854 links to 264 of rad 0.149727.  (no action taken)
     B1      X, Y, Z:  48.68  28.78  0.4
4.4  Line 271 of rad 0.318 links to 270 of rad 0.129658.  (no action taken)
     B1      X, Y, Z:  50.25  36.0  1.8
4.4  Line 287 of rad 0.444928 links to 286 of rad 0.125.  (no action taken)
     B1      X, Y, Z:  46.74  33.35  1.3
4.4  Line 303 of rad 0.334903 links to 302 of rad 0.140253.  (no action taken)
     B1      X, Y, Z:  41.96  29.39  1.19
4.4  Line 308 of rad 0.278757 links to 307 of rad 0.130186.  (no action taken)
     B1      X, Y, Z:  41.87  26.31  1.89
4.4  Line 322 of rad 0.260441 links to 321 of rad 0.125.  (no action taken)
     B1      X, Y, Z:  50.94  32.57  1.69
4.4  Line 336 of rad 0.347764 links to 335 of rad 0.149312.  (no action taken)
     B1      X, Y, Z:  49.71  29.64  1.8
4.4  Line 354 of rad 0.258863 links to 353 of rad 0.125.  (no action taken)
     B1      X, Y, Z:  48.18  22.39  2.5
4.4  Line 438 of rad 0.412457 links to 437 of rad 0.132914.  (no action taken)
     B1      X, Y, Z:  48.49  40.0  3.6
4.4  Line 485 of rad 0.293161 links to 484 of rad 0.125.  (no action taken)
     B1      X, Y, Z:  52.6  41.25  3.5
4.4  Line 511 of rad 0.291689 links to 510 of rad 0.125.  (no action taken)
     B1      X, Y, Z:  50.18  36.81  5.4
4.4  Line 623 of rad 0.292099 links to 622 of rad 0.125.  (no action taken)
     B1      X, Y, Z:  42.42  43.76  1.39
4.4  Line 656 of rad 0.283384 links to 655 of rad 0.130227.  (no action taken)
     B1      X, Y, Z:  39.67  38.92  2.0
4.4  Line 676 of rad 0.282788 links to 675 of rad 0.13765.  (no action taken)
     B1      X, Y, Z:  37.62  33.37  2.39
4.4  Line 720 of rad 0.287052 links to 719 of rad 0.142645.  (no action taken)
     B1      X, Y, Z:  38.76  21.37  2.5
4.4  Line 745 of rad 0.274966 links to 744 of rad 0.137171.  (no action taken)
     B1      X, Y, Z:  39.57  13.51  2.1
4.4  Line 749 of rad 0.283992 links to 748 of rad 0.125.  (no action taken)
     B1      X, Y, Z:  37.92  11.67  2.0
4.4  Line 751 of rad 0.289713 links to 750 of rad 0.133366.  (no action taken)
     B1      X, Y, Z:  36.99  11.34  1.89
4.4  Line 866 of rad 0.281197 links to 865 of rad 0.138542.  (no action taken)
     B1      X, Y, Z:  37.28  51.19  3.2
4.4  Line 870 of rad 0.344225 links to 869 of rad 0.170647.  (no action taken)
     B1      X, Y, Z:  36.32  50.83  3.29
4.4  Line 980 of rad 0.326589 links to 979 of rad 0.125.  (no action taken)
     B1      X, Y, Z:  35.25  39.99  1.39
4.4  Line 983 of rad 0.261699 links to 982 of rad 0.125.  (no action taken)
     B1      X, Y, Z:  35.29  39.2  1.39
4.4  Line 1019 of rad 0.260036 links to 1018 of rad 0.125.  (no action taken)
     B1      X, Y, Z:  37.68  50.5  2.2
4.4  Line 1085 of rad 0.266959 links to 1084 of rad 0.125.  (no action taken)
     B1      X, Y, Z:  32.53  54.35  2.1
4.4  Line 1148 of rad 0.308933 links to 1147 of rad 0.146487.  (no action taken)
     B1      X, Y, Z:  32.76  49.64  1.3
4.4  Line 1186 of rad 0.346864 links to 1185 of rad 0.142465.  (no action taken)
     B1      X, Y, Z:  40.85  43.69  3.0
4.4  Line 1199 of rad 0.272056 links to 1198 of rad 0.125.  (no action taken)
     B1      X, Y, Z:  40.46  41.54  2.89
4.4  Line 1204 of rad 0.359501 links to 1203 of rad 0.139206.  (no action taken)
     B1      X, Y, Z:  39.89  37.51  2.6
4.4  Line 1256 of rad 0.259007 links to 1255 of rad 0.125.  (no action taken)
     B1      X, Y, Z:  37.82  58.13  2.1
4.4  Line 1307 of rad 0.314598 links to 1306 of rad 0.125.  (no action taken)
     B1      X, Y, Z:  38.4  59.69  2.2
4.4  Line 1321 of rad 0.260518 links to 1320 of rad 0.125.  (no action taken)
     B1      X, Y, Z:  40.46  63.96  1.3
4.4  Line 1327 of rad 0.352695 links to 1326 of rad 0.125.  (no action taken)
     B1      X, Y, Z:  42.87  65.42  0.9
4.4  Line 1357 of rad 0.289465 links to 1356 of rad 0.125.  (no action taken)
     B1      X, Y, Z:  29.81  55.19  2.6
4.4  Line 1429 of rad 0.310536 links to 1428 of rad 0.125.  (no action taken)
     B1      X, Y, Z:  38.29  61.61  1.39
4.4  Line 1473 of rad 0.392542 links to 1472 of rad 0.125.  (no action taken)
     B1      X, Y, Z:  44.12  58.64  2.89
4.4  Line 1520 of rad 0.333447 links to 1519 of rad 0.13883.  (no action taken)
     B1      X, Y, Z:  45.04  69.5  1.5
4.4  Line 1525 of rad 0.30268 links to 1524 of rad 0.130822.  (no action taken)
     B1      X, Y, Z:  45.23  70.56  1.39
4.4  Line 1557 of rad 0.31655 links to 1556 of rad 0.125.  (no action taken)
     B1      X, Y, Z:  44.9  80.39  1.6
4.4  Line 1559 of rad 0.306173 links to 1558 of rad 0.140599.  (no action taken)
     B1      X, Y, Z:  44.75  81.34  1.69
4.4  Line 1561 of rad 0.260674 links to 1560 of rad 0.125.  (no action taken)
     B1      X, Y, Z:  44.81  82.09  1.69
4.4  Line 1578 of rad 0.358207 links to 1577 of rad 0.168714.  (no action taken)
     B1      X, Y, Z:  43.04  58.14  2.89
4.4  Line 1613 of rad 0.264681 links to 1612 of rad 0.130531.  (no action taken)
     B1      X, Y, Z:  35.11  65.4  3.1
4.4  Line 1803 of rad 0.2781 links to 1802 of rad 0.125.  (no action taken)
     B1      X, Y, Z:  61.08  49.97  4.79
4.4  Line 1888 of rad 0.25175 links to 1887 of rad 0.125.  (no action taken)
     B1      X, Y, Z:  48.45  61.96  3.6
4.4  Line 1903 of rad 0.344295 links to 1902 of rad 0.14017.  (no action taken)
     B1      X, Y, Z:  45.17  61.97  3.39
4.4  Line 1909 of rad 0.34961 links to 1908 of rad 0.125.  (no action taken)
     B1      X, Y, Z:  43.85  62.46  3.39
4.4  Line 2079 of rad 0.376645 links to 2078 of rad 0.170574.  (no action taken)
     B1      X, Y, Z:  50.15  78.66  1.19
4.4  Line 2083 of rad 0.283226 links to 2082 of rad 0.125.  (no action taken)
     B1      X, Y, Z:  49.98  79.58  1.19
4.4  Line 2212 of rad 0.30082 links to 2211 of rad 0.125.  (no action taken)
     B1      X, Y, Z:  56.2  75.69  1.19
4.4  Line 2329 of rad 0.313185 links to 2328 of rad 0.125.  (no action taken)
     B1      X, Y, Z:  47.4  40.39  1.8
2.1  Line 1 has 8 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  50.95  50.46  2.13
2.1  Line 1042 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  33.32  54.63  2.1
 
 


Number of type A irregularities = 16
Number of type B1 irregularities = 68
Number of type B2 irregularities = 0
Number of type C irregularities = 0
