# Standardization file for 2-Hippocampus-D-Asp-treated-mice.swc created with StdSwc version 1.31 on 10/23/14.
# Edited SWC file saved as 2-Hippocampus-D-Asp-treated-mice.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.2  Radius of line 111 at 0.029481 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -0.31562  11.206  0.0
4.2  Radius of line 117 at 0.029646 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -0.34062  24.603  0.0
4.2  Radius of line 140 at 0.030936 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -0.26563  28.159  0.0
4.2  Radius of line 141 at 0.013974 <= 0.05.  (no action taken)
     B1      X, Y, Z:  0.125  36.956  5.9
4.2  Radius of line 173 at 0.021877 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -0.525  73.059  5.9
4.2  Radius of line 174 at 0.038016 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -1.025  77.048  5.9
4.2  Radius of line 175 at 0.026698 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -2.0594  92.356  5.9
4.2  Radius of line 176 at 0.026698 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -2.4344  92.812  5.9
4.2  Radius of line 204 at 0.016829 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -2.7188  98.603  5.9
4.2  Radius of line 206 at 0.028299 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -1.4031  114.53  -8.02
4.2  Radius of line 211 at 0.032171 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -1.4719  93.524  5.9
4.2  Radius of line 225 at 0.021873 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -0.375  120.68  -8.02
2.5  Seg length ending at pt. 8 <= 0.1 at 0.06.  (removed)
     A       X, Y, Z:  -15.23  -54.46  -11.97
2.5  Seg length ending at pt. 29 <= 0.1 at 0.08.  (removed)
     A       X, Y, Z:  6.61  -27.37  -1.74
2.5  Seg length ending at pt. 38 <= 0.1 at 0.06.  (removed)
     A       X, Y, Z:  0.73  -9.73  6.88
2.5  Seg length ending at pt. 51 <= 0.1 at 0.07.  (removed)
     A       X, Y, Z:  -4.6  -44.05  5.98
2.5  Seg length ending at pt. 88 <= 0.1 at 0.08.  (removed)
     A       X, Y, Z:  -32.86  11.94  -9.85
2.5  Seg length ending at pt. 106 <= 0.1 at 0.08.  (removed)
     A       X, Y, Z:  66.07  0.87  1.74
2.5  Seg length ending at pt. 113 <= 0.1 at 0.08.  (removed)
     A       X, Y, Z:  0.39  11.25  7.88
2.5  Seg length ending at pt. 115 <= 0.1 at 0.08.  (removed)
     A       X, Y, Z:  15.3  10.57  7.88
2.5  Seg length ending at pt. 157 <= 0.1 at 0.08.  (removed)
     A       X, Y, Z:  56.92  102.51  -15.97
2.5  Seg length ending at pt. 185 <= 0.1 at 0.07.  (removed)
     A       X, Y, Z:  -58.24  132.17  3.32
2.5  Seg length ending at pt. 255 <= 0.1 at 0.08.  (removed)
     A       X, Y, Z:  5.43  172.51  -8.1
2.5  Seg length ending at pt. 265 <= 0.1 at 0.07.  (removed)
     A       X, Y, Z:  1.88  181.78  -18.79
4.4  Line 112 of rad 0.19 links to 111 of rad 0.029481.  (no action taken)
     B1      X, Y, Z:  0.39  11.25  7.8
4.4  Line 118 of rad 0.19 links to 117 of rad 0.029646.  (no action taken)
     B1      X, Y, Z:  1.87  25.98  4.32
4.4  Line 142 of rad 0.19 links to 141 of rad 0.013974.  (no action taken)
     B1      X, Y, Z:  2.54  38.45  -0.68
4.4  Line 158 of rad 0.19 links to 141 of rad 0.013974.  (no action taken)
     B1      X, Y, Z:  0.79  48.5  5.9
4.4  Line 177 of rad 0.19 links to 176 of rad 0.026698.  (no action taken)
     B1      X, Y, Z:  -4.64  100.97  -11.28
4.4  Line 191 of rad 0.19 links to 174 of rad 0.038016.  (no action taken)
     B1      X, Y, Z:  0.8  77.88  -12.19
4.4  Line 205 of rad 0.19 links to 204 of rad 0.016829.  (no action taken)
     B1      X, Y, Z:  -2.68  98.897  5.9
4.4  Line 207 of rad 0.19 links to 206 of rad 0.028299.  (no action taken)
     B1      X, Y, Z:  -3.47  118.36  -11.51
4.4  Line 212 of rad 0.19 links to 211 of rad 0.032171.  (no action taken)
     B1      X, Y, Z:  -0.54  98.21  -10.82
4.4  Line 226 of rad 0.19 links to 225 of rad 0.021873.  (no action taken)
     B1      X, Y, Z:  1.28  121.34  -10.82
4.4  Line 239 of rad 0.19 links to 225 of rad 0.021873.  (no action taken)
     B1      X, Y, Z:  2.32  148.68  -11.28
2.1  Line 1 has 9 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  0.0  0.0  0.0
 
 


Number of type A irregularities = 12
Number of type B1 irregularities = 24
Number of type B2 irregularities = 0
Number of type C irregularities = 0
