# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\BM2261_mPFC_P28_ChC_red_AnkGgreen_1_3.ims.swc.swc created with StdSwc version 1.31 on 3/31/19.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\BM2261_mPFC_P28_ChC_red_AnkGgreen_1_3.ims.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 2.  (no action taken)
     B1      X, Y, Z:  225.67  129.51  16.0
4.3  Radius of line 3 at 1.58723 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  225.51  129.34  16.02
4.3  Radius of line 4 at 1.58723 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  225.34  129.17  16.04
4.3  Radius of line 5 at 1.58723 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  225.0  128.84  16.08
4.3  Radius of line 40 at 1.58723 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  225.0  128.84  16.08
4.3  Radius of line 128 at 1.58723 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  225.0  128.84  16.08
4.3  Radius of line 2024 at 1.5424 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  228.97  137.76  15.91
4.3  Radius of line 2025 at 1.63431 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  229.07  138.2  15.93
4.3  Radius of line 2026 at 1.7548 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  229.18  138.66  15.93
4.3  Radius of line 2027 at 1.81637 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  229.31  139.12  15.92
4.3  Radius of line 2028 at 1.78123 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  229.43  139.31  15.9
4.3  Radius of line 2029 at 1.78123 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  229.55  139.51  15.88
4.3  Radius of line 2030 at 1.78664 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  229.33  140.12  15.8
4.3  Radius of line 2031 at 1.66746 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  229.22  140.57  15.72
4.3  Radius of line 2032 at 1.5107 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  229.17  140.95  15.61
4.3  Radius of line 2065 at 1.78123 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  229.55  139.51  15.88
4.3  Radius of line 2066 at 1.5578 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  229.91  139.79  15.82
2.5  Seg length ending at pt. 2 <= 0.1 at 0.0141.  (removed)
     A       X, Y, Z:  225.68  129.51  16.01
2.5  Seg length ending at pt. 39 <= 0.1 at 0.0245.  (removed)
     A       X, Y, Z:  225.67  129.51  16.0
2.4  Seg length ending at pt. 86 >= 6.0 stdevs above mean at 7.0475.  (no action taken)
     B1      X, Y, Z:  228.43  135.75  15.79
2.5  Seg length ending at pt. 153 <= 0.1 at 0.0316.  (removed)
     A       X, Y, Z:  215.99  131.86  14.86
2.5  Seg length ending at pt. 181 <= 0.1 at 0.0316.  (removed)
     A       X, Y, Z:  215.99  131.86  14.86
2.4  Seg length ending at pt. 1989 >= 6.0 stdevs above mean at 6.8264.  (no action taken)
     B1      X, Y, Z:  228.43  135.75  15.79
2.5  Seg length ending at pt. 2438 <= 0.1 at 0.0361.  (removed)
     A       X, Y, Z:  263.94  155.72  8.34
2.5  Seg length ending at pt. 2452 <= 0.1 at 0.0361.  (removed)
     A       X, Y, Z:  263.94  155.72  8.34
2.5  Seg length ending at pt. 2543 <= 0.1 at 0.0224.  (removed)
     A       X, Y, Z:  271.23  159.97  8.97
2.5  Seg length ending at pt. 2551 <= 0.1 at 0.0224.  (removed)
     A       X, Y, Z:  271.23  159.97  8.97
2.7  Line 40 of rad 1.58723 is an included side branch.  (removed)
     A      X, Y, Z:  225.0  128.84  16.08
2.6  Line 1 and line 58 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  225.67  129.51  16.0
2.6  Line 5 and line 128 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  225.0  128.84  16.08
2.6  Line 13 and line 19 have the same coordinates.  (second line removed)
     A      X, Y, Z:  222.11  128.97  11.23
2.6  Line 57 and line 86 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  228.43  135.75  15.79
2.6  Line 57 and line 1989 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  228.43  135.75  15.79
2.6  Line 86 and line 1989 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  228.43  135.75  15.79
2.6  Line 107 and line 118 have the same coordinates.  (second line removed)
     A      X, Y, Z:  237.11  134.43  15.47
2.6  Line 207 and line 233 have the same coordinates.  (second line removed)
     A      X, Y, Z:  208.76  138.89  14.91
2.6  Line 246 and line 261 have the same coordinates.  (second line removed)
     A      X, Y, Z:  205.71  143.29  15.56
2.6  Line 308 and line 315 have the same coordinates.  (second line removed)
     A      X, Y, Z:  204.41  161.47  14.44
2.6  Line 336 and line 453 have the same coordinates.  (second line removed)
     A      X, Y, Z:  215.15  136.34  13.59
2.6  Line 347 and line 367 have the same coordinates.  (second line removed)
     A      X, Y, Z:  215.68  140.95  13.81
2.6  Line 372 and line 388 have the same coordinates.  (second line removed)
     A      X, Y, Z:  216.12  142.96  13.63
2.6  Line 402 and line 414 have the same coordinates.  (second line removed)
     A      X, Y, Z:  217.11  148.64  13.58
2.6  Line 459 and line 488 have the same coordinates.  (second line removed)
     A      X, Y, Z:  214.07  137.03  9.39
2.6  Line 497 and line 1029 have the same coordinates.  (second line removed)
     A      X, Y, Z:  212.48  140.71  7.55
2.6  Line 529 and line 742 have the same coordinates.  (second line removed)
     A      X, Y, Z:  204.2  150.26  7.14
2.6  Line 556 and line 630 have the same coordinates.  (second line removed)
     A      X, Y, Z:  193.69  149.0  10.18
2.6  Line 593 and line 605 have the same coordinates.  (second line removed)
     A      X, Y, Z:  179.88  154.47  10.14
2.6  Line 611 and line 619 have the same coordinates.  (second line removed)
     A      X, Y, Z:  177.62  154.26  12.43
2.6  Line 683 and line 719 have the same coordinates.  (second line removed)
     A      X, Y, Z:  177.69  139.76  14.22
2.6  Line 685 and line 696 have the same coordinates.  (second line removed)
     A      X, Y, Z:  177.33  139.83  14.25
2.6  Line 753 and line 761 have the same coordinates.  (second line removed)
     A      X, Y, Z:  203.01  154.56  6.88
2.6  Line 809 and line 819 have the same coordinates.  (second line removed)
     A      X, Y, Z:  186.97  164.3  13.14
2.6  Line 826 and line 833 have the same coordinates.  (second line removed)
     A      X, Y, Z:  184.69  166.25  12.24
2.6  Line 835 and line 876 have the same coordinates.  (second line removed)
     A      X, Y, Z:  184.31  166.67  11.37
2.6  Line 841 and line 853 have the same coordinates.  (second line removed)
     A      X, Y, Z:  182.58  167.12  9.17
2.6  Line 877 and line 899 have the same coordinates.  (second line removed)
     A      X, Y, Z:  184.19  167.0  10.94
2.6  Line 918 and line 933 have the same coordinates.  (second line removed)
     A      X, Y, Z:  184.43  175.04  12.48
2.6  Line 936 and line 948 have the same coordinates.  (second line removed)
     A      X, Y, Z:  184.49  176.35  13.18
2.6  Line 954 and line 981 have the same coordinates.  (second line removed)
     A      X, Y, Z:  184.21  179.19  13.07
2.6  Line 1059 and line 1228 have the same coordinates.  (second line removed)
     A      X, Y, Z:  211.05  153.6  7.72
2.6  Line 1086 and line 1093 have the same coordinates.  (second line removed)
     A      X, Y, Z:  214.23  163.55  7.33
2.6  Line 1110 and line 1122 have the same coordinates.  (second line removed)
     A      X, Y, Z:  219.56  167.51  9.12
2.6  Line 1145 and line 1189 have the same coordinates.  (second line removed)
     A      X, Y, Z:  227.56  169.88  8.35
2.6  Line 1248 and line 1270 have the same coordinates.  (second line removed)
     A      X, Y, Z:  210.49  160.28  11.33
2.6  Line 1292 and line 1311 have the same coordinates.  (second line removed)
     A      X, Y, Z:  207.62  168.57  11.15
2.6  Line 1326 and line 1773 have the same coordinates.  (second line removed)
     A      X, Y, Z:  207.71  174.91  11.21
2.6  Line 1337 and line 1355 have the same coordinates.  (second line removed)
     A      X, Y, Z:  208.74  179.0  10.73
2.6  Line 1363 and line 1538 have the same coordinates.  (second line removed)
     A      X, Y, Z:  210.93  181.98  9.85
2.6  Line 1391 and line 1414 have the same coordinates.  (second line removed)
     A      X, Y, Z:  212.62  192.84  10.52
2.6  Line 1418 and line 1465 have the same coordinates.  (second line removed)
     A      X, Y, Z:  212.6  194.19  9.29
2.6  Line 1552 and line 1559 have the same coordinates.  (second line removed)
     A      X, Y, Z:  210.13  187.07  13.34
2.6  Line 1574 and line 1584 have the same coordinates.  (second line removed)
     A      X, Y, Z:  208.44  192.89  13.39
2.6  Line 1611 and line 1650 have the same coordinates.  (second line removed)
     A      X, Y, Z:  206.3  203.14  11.75
2.6  Line 1698 and line 1717 have the same coordinates.  (second line removed)
     A      X, Y, Z:  193.99  214.33  8.91
2.6  Line 1742 and line 1757 have the same coordinates.  (second line removed)
     A      X, Y, Z:  194.66  224.28  8.18
2.6  Line 1775 and line 1784 have the same coordinates.  (second line removed)
     A      X, Y, Z:  207.67  175.91  11.74
2.6  Line 1872 and line 1888 have the same coordinates.  (second line removed)
     A      X, Y, Z:  181.05  200.34  11.16
2.6  Line 1902 and line 1913 have the same coordinates.  (second line removed)
     A      X, Y, Z:  179.49  205.79  11.75
2.6  Line 1920 and line 1932 have the same coordinates.  (second line removed)
     A      X, Y, Z:  179.18  208.59  11.7
2.6  Line 1992 and line 2022 have the same coordinates.  (second line removed)
     A      X, Y, Z:  228.65  136.55  15.83
2.6  Line 2029 and line 2066 have the same coordinates.  (second line removed)
     A      X, Y, Z:  229.55  139.51  15.88
2.6  Line 2084 and line 2575 have the same coordinates.  (second line removed)
     A      X, Y, Z:  236.22  142.88  14.53
2.6  Line 2110 and line 2147 have the same coordinates.  (second line removed)
     A      X, Y, Z:  246.63  142.66  13.23
2.6  Line 2176 and line 2194 have the same coordinates.  (second line removed)
     A      X, Y, Z:  257.5  144.36  10.57
2.6  Line 2196 and line 2230 have the same coordinates.  (second line removed)
     A      X, Y, Z:  258.28  144.55  10.6
2.6  Line 2203 and line 2221 have the same coordinates.  (second line removed)
     A      X, Y, Z:  259.85  144.34  14.87
2.6  Line 2242 and line 2358 have the same coordinates.  (second line removed)
     A      X, Y, Z:  263.07  145.92  9.43
2.6  Line 2251 and line 2317 have the same coordinates.  (second line removed)
     A      X, Y, Z:  265.95  143.46  9.53
2.6  Line 2271 and line 2283 have the same coordinates.  (second line removed)
     A      X, Y, Z:  263.06  137.19  11.63
2.6  Line 2293 and line 2303 have the same coordinates.  (second line removed)
     A      X, Y, Z:  260.97  133.66  13.0
2.6  Line 2365 and line 2507 have the same coordinates.  (second line removed)
     A      X, Y, Z:  264.64  148.33  9.17
2.6  Line 2367 and line 2419 have the same coordinates.  (second line removed)
     A      X, Y, Z:  264.95  148.74  9.31
2.6  Line 2386 and line 2398 have the same coordinates.  (second line removed)
     A      X, Y, Z:  272.65  149.52  11.21
2.6  Line 2470 and line 2477 have the same coordinates.  (second line removed)
     A      X, Y, Z:  263.69  159.14  9.54
2.6  Line 2478 and line 2484 have the same coordinates.  (second line removed)
     A      X, Y, Z:  263.5  159.37  10.11
2.6  Line 2621 and line 2642 have the same coordinates.  (second line removed)
     A      X, Y, Z:  245.21  159.17  14.32
2.6  Line 2659 and line 2672 have the same coordinates.  (second line removed)
     A      X, Y, Z:  251.23  162.66  13.65
2.6  Line 2684 and line 2714 have the same coordinates.  (second line removed)
     A      X, Y, Z:  253.47  166.98  13.56
2.6  Line 2715 and line 2802 have the same coordinates.  (second line removed)
     A      X, Y, Z:  253.73  167.26  13.42
2.6  Line 2718 and line 2749 have the same coordinates.  (second line removed)
     A      X, Y, Z:  254.85  167.06  12.66
2.6  Line 2767 and line 2773 have the same coordinates.  (second line removed)
     A      X, Y, Z:  261.83  164.62  13.3
2.6  Line 2818 and line 2864 have the same coordinates.  (second line removed)
     A      X, Y, Z:  256.76  172.92  13.28
2.6  Line 2866 and line 3003 have the same coordinates.  (second line removed)
     A      X, Y, Z:  257.15  173.38  12.47
2.6  Line 2870 and line 2898 have the same coordinates.  (second line removed)
     A      X, Y, Z:  258.3  173.57  10.16
2.6  Line 2900 and line 2919 have the same coordinates.  (second line removed)
     A      X, Y, Z:  258.76  173.72  8.78
2.6  Line 2921 and line 2945 have the same coordinates.  (second line removed)
     A      X, Y, Z:  258.91  174.01  7.28
2.6  Line 2947 and line 2954 have the same coordinates.  (second line removed)
     A      X, Y, Z:  258.79  174.61  5.93
2.6  Line 2962 and line 2969 have the same coordinates.  (second line removed)
     A      X, Y, Z:  255.3  176.84  6.12
2.6  Line 2975 and line 2986 have the same coordinates.  (second line removed)
     A      X, Y, Z:  252.89  177.6  6.05
2.6  Line 3075 and line 3084 have the same coordinates.  (second line removed)
     A      X, Y, Z:  247.67  199.85  9.29
2.6  Line 3111 and line 3139 have the same coordinates.  (second line removed)
     A      X, Y, Z:  240.1  207.71  9.2
4.4  Line 3 of rad 1.58723 links to 1 of rad 0.78432.  (no action taken)
     B1      X, Y, Z:  225.51  129.34  16.02
4.4  Line 128 of rad 1.58723 links to 1 of rad 0.78432.  (no action taken)
     B1      X, Y, Z:  225.0  128.84  16.08
2.1  Line 1 has 3 daughters.  Type is 2.  (no action taken)
     B1      X, Y, Z:  225.67  129.51  16.0
 
 


Number of type A irregularities = 87
Number of type B1 irregularities = 27
Number of type B2 irregularities = 0
Number of type C irregularities = 0
