# Standardization file for 062204b_zd.swc created with StdSwc version 1.31 by Duncan Donohue on 10/30/07.
# Edited SWC file saved as 062204b_zd.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     ordinates
#
4.3  Radius of line 88 at 1.285 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  1.64534  13.5029  -2.14322
4.3  Radius of line 89 at 1.285 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  2.86534  14.2929  -2.14322
4.3  Radius of line 91 at 1.435 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  1.28646  13.8243  -2.245
4.3  Radius of line 92 at 1.435 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  1.02646  12.8043  -2.245
4.3  Radius of line 808 at 1.285 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  -101.914  45.8243  16.425
4.3  Radius of line 2594 at 1.815 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  91.5265  -70.3657  12.165
2.4  Seg length ending at pt. 31 >= 6.0 stdevs above mean at 10.4865.  (no action taken)
     B1      X, Y, Z:  7.61391  8.15764  -0.450412
2.4  Seg length ending at pt. 59 >= 6.0 stdevs above mean at 13.0053.  (no action taken)
     B1      X, Y, Z:  5.77806  9.80176  -0.971093
2.4  Seg length ending at pt. 85 >= 6.0 stdevs above mean at 14.6846.  (no action taken)
     B1      X, Y, Z:  4.55414  10.8979  -1.31822
2.4  Seg length ending at pt. 88 >= 6.0 stdevs above mean at 18.6756.  (no action taken)
     B1      X, Y, Z:  1.64534  13.5029  -2.14322
2.4  Seg length ending at pt. 91 >= 6.0 stdevs above mean at 19.1679.  (no action taken)
     B1      X, Y, Z:  1.28646  13.8243  -2.245
2.4  Seg length ending at pt. 153 >= 6.0 stdevs above mean at 26.1264.  (no action taken)
     B1      X, Y, Z:  48.8539  32.7876  -7.99041
2.4  Seg length ending at pt. 154 >= 6.0 stdevs above mean at 11.0052.  (no action taken)
     B1      X, Y, Z:  49.2039  34.7676  -18.8104
2.4  Seg length ending at pt. 158 >= 6.0 stdevs above mean at 26.1264.  (no action taken)
     B1      X, Y, Z:  48.8539  32.7876  -7.99041
2.4  Seg length ending at pt. 758 >= 6.0 stdevs above mean at 12.0917.  (no action taken)
     B1      X, Y, Z:  -54.0035  22.4143  -12.985
2.4  Seg length ending at pt. 809 >= 6.0 stdevs above mean at 12.0917.  (no action taken)
     B1      X, Y, Z:  -54.0035  22.4143  -12.985
2.5  Seg length ending at pt. 830 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  53.8839  38.9776  -19.9504
2.5  Seg length ending at pt. 911 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  53.8839  38.9776  -19.9504
2.5  Seg length ending at pt. 1216 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  23.7441  -15.6821  2.56178
2.5  Seg length ending at pt. 1259 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  23.7441  -15.6821  2.56178
2.5  Seg length ending at pt. 1281 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  -95.6247  -19.3871  -36.0532
2.5  Seg length ending at pt. 1441 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  -95.6247  -19.3871  -36.0532
2.5  Seg length ending at pt. 1484 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  -72.4235  1.34428  -15.655
2.5  Seg length ending at pt. 1534 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  -72.4235  1.34428  -15.655
2.5  Seg length ending at pt. 1597 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  113.164  163.238  -23.5404
2.5  Seg length ending at pt. 1935 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  113.164  163.238  -23.5404
2.5  Seg length ending at pt. 2024 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  253.884  463.518  -81.3804
2.5  Seg length ending at pt. 2134 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  253.884  463.518  -81.3804
2.5  Seg length ending at pt. 2219 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  -219.585  -66.1771  -145.633
2.5  Seg length ending at pt. 2236 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  -219.585  -66.1771  -145.633
2.5  Seg length ending at pt. 2241 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  -164.145  -22.7971  -58.3032
2.5  Seg length ending at pt. 2413 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  -164.145  -22.7971  -58.3032
2.5  Seg length ending at pt. 2509 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  -72.7535  -39.8957  -14.895
2.5  Seg length ending at pt. 2595 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  -72.7535  -39.8957  -14.895
2.5  Seg length ending at pt. 2627 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  141.394  323.988  -27.9604
2.5  Seg length ending at pt. 2648 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  141.394  323.988  -27.9604
2.5  Seg length ending at pt. 2700 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  -437.525  15.1229  -62.8832
2.5  Seg length ending at pt. 2753 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  -437.525  15.1229  -62.8832
2.5  Seg length ending at pt. 2766 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  -260.915  -57.1471  -107.383
2.5  Seg length ending at pt. 2785 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  -260.915  -57.1471  -107.383
2.5  Seg length ending at pt. 2860 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  143.964  359.008  -31.2304
2.5  Seg length ending at pt. 2964 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  143.964  359.008  -31.2304
2.5  Seg length ending at pt. 3165 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  -444.265  79.4129  -83.8332
2.5  Seg length ending at pt. 3189 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  -444.265  79.4129  -83.8332
2.2  Line 1 links to 0     Changed to -1
     A       X, Y, Z:  15.2569  1.31282  1.7173
2.6  Line 58 and line 153 have the same coordinates.  Radii do not match.  (Changed by hand using Neuromantic, details doccumented in swc file header)
     B2      X, Y, Z:  48.8539  32.7876  -7.99041
2.6  Line 58 and line 158 have the same coordinates.  Radii do not match.  (Changed by hand using Neuromantic, details doccumented in swc file header)
     B2      X, Y, Z:  48.8539  32.7876  -7.99041
2.6  Line 87 and line 489 have the same coordinates.  Radii do not match.  (Changed by hand using Neuromantic, details doccumented in swc file header)
     B2      X, Y, Z:  3.19414  6.19786  -1.01822
2.6  Line 87 and line 510 have the same coordinates.  Radii do not match.  (Changed by hand using Neuromantic, details doccumented in swc file header)
     B2      X, Y, Z:  3.19414  6.19786  -1.01822
2.6  Line 90 and line 567 have the same coordinates.  Radii do not match.  (Changed by hand using Neuromantic, details doccumented in swc file header)
     B2      X, Y, Z:  0.745335  12.3729  -2.22322
2.6  Line 90 and line 695 have the same coordinates.  Radii do not match.  (Changed by hand using Neuromantic, details doccumented in swc file header)
     B2      X, Y, Z:  0.745335  12.3729  -2.22322
2.6  Line 152 and line 758 have the same coordinates.  Radii do not match.  (Changed by hand using Neuromantic, details doccumented in swc file header)
     B2      X, Y, Z:  -54.0035  22.4143  -12.985
2.6  Line 152 and line 809 have the same coordinates.  Radii do not match.  (Changed by hand using Neuromantic, details doccumented in swc file header)
     B2      X, Y, Z:  -54.0035  22.4143  -12.985
2.6  Line 153 and line 158 have the same coordinates.  Radii do not match.  (Changed by hand using Neuromantic, details doccumented in swc file header)
     B2      X, Y, Z:  48.8539  32.7876  -7.99041
2.6  Line 489 and line 511 have the same coordinates.  (second line removed)
     A      X, Y, Z:  3.19414  6.19786  -1.01822
2.6  Line 567 and line 695 have the same coordinates.  Radii do not match.  (Changed by hand using Neuromantic, details doccumented in swc file header)
     B2      X, Y, Z:  0.745335  12.3729  -2.22322
2.6  Line 758 and line 809 have the same coordinates.  Radii do not match.  (Changed by hand using Neuromantic, details doccumented in swc file header)
     B2      X, Y, Z:  -54.0035  22.4143  -12.985
4.4  Line 1258 of rad 0.605 links to 1257 of rad 0.3.  (no action taken)
     B1      X, Y, Z:  109.324  -10.1721  -5.28822
4.4  Line 1820 of rad 0.68 links to 1819 of rad 0.3.  (no action taken)
     B1      X, Y, Z:  222.244  409.958  -110.1
4.4  Line 1890 of rad 0.68 links to 1889 of rad 0.3.  (no action taken)
     B1      X, Y, Z:  209.104  490.188  -123.52
4.4  Line 2593 of rad 0.83 links to 2592 of rad 0.38.  (no action taken)
     B1      X, Y, Z:  89.5665  -70.3657  12.165
4.4  Line 2594 of rad 1.815 links to 2593 of rad 0.83.  (no action taken)
     B1      X, Y, Z:  91.5265  -70.3657  12.165
4.4  Line 2748 of rad 0.83 links to 2747 of rad 0.38.  (no action taken)
     B1      X, Y, Z:  -443.655  72.1229  -84.9032
4.4  Line 3170 of rad 0.605 links to 3169 of rad 0.3.  (no action taken)
     B1      X, Y, Z:  -445.165  84.9229  -84.5932
2.1  Line 1 has 6 daughters.  Type is 1.  (all dendrites connected to closest soma point)
     B2      X, Y, Z:  15.2569  1.31282  1.7173
2.1  Line 43 has 3 daughters.  Type is 3.  (Changed by hand using Neuromantic, details doccumented in swc file header)
     B2      X, Y, Z:  25.4439  21.2876  -6.47041
2.1  Line 86 has 3 daughters.  Type is 3.  (Changed by hand using Neuromantic, details doccumented in swc file header)
     B2      X, Y, Z:  3.80414  7.97786  -1.31822
2.1  Line 89 has 3 daughters.  Type is 3.  (Changed by hand using Neuromantic, details doccumented in swc file header)
     B2      X, Y, Z:  2.86534  14.2929  -2.14322
2.1  Line 144 has 3 daughters.  Type is 3.  (Changed by hand using Neuromantic, details doccumented in swc file header)
     B2      X, Y, Z:  -44.7835  30.1843  -12.075
 
 


Number of type A irregularities = 30
Number of type B1 irregularities = 23
Number of type B2 irregularities = 16
Number of type C irregularities = 0
