# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\Striatum-PV-KO-EGFP-5.ims.swc.swc created with StdSwc version 1.31 on 6/29/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\Striatum-PV-KO-EGFP-5.ims.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  293.54  195.4  -2.77
4.5  Radius of terminal line 264 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  343.04  252.15  1.89
4.5  Radius of terminal line 341 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  357.79  237.88  -0.08
4.5  Radius of terminal line 379 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  352.4  231.61  0.87
4.5  Radius of terminal line 416 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  352.14  222.55  2.02
4.5  Radius of terminal line 556 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  361.51  189.56  1.26
4.5  Radius of terminal line 583 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  363.73  183.43  -0.62
4.5  Radius of terminal line 602 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  360.02  174.08  -0.11
4.5  Radius of terminal line 616 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  345.93  180.95  1.42
4.5  Radius of terminal line 635 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  331.22  201.88  0.94
4.5  Radius of terminal line 785 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  343.08  166.91  2.2
4.5  Radius of terminal line 801 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  337.54  163.26  -4.14
4.5  Radius of terminal line 824 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  322.79  179.91  1.27
4.5  Radius of terminal line 926 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  327.79  233.27  1.4
4.5  Radius of terminal line 942 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  309.89  215.48  1.76
4.5  Radius of terminal line 1120 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  325.17  247.24  -4.43
4.5  Radius of terminal line 1136 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  307.69  219.64  1.36
4.5  Radius of terminal line 1267 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  281.94  256.87  -2.13
4.5  Radius of terminal line 1304 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  287.28  211.11  -0.11
4.3  Radius of line 1307 at 0.714 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  293.63  194.28  -3.93
4.3  Radius of line 1308 at 0.714 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  293.71  194.1  -3.99
4.3  Radius of line 1309 at 0.797 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  293.91  193.74  -4.01
4.3  Radius of line 1310 at 0.776 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  294.17  193.43  -3.98
4.3  Radius of line 1311 at 0.602 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  294.47  193.19  -3.93
4.5  Radius of terminal line 1582 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  363.5  151.27  2.09
4.5  Radius of terminal line 1601 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  346.81  155.81  1.64
4.5  Radius of terminal line 1618 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  331.6  163.39  0.35
4.5  Radius of terminal line 1661 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  293.74  158.49  0.1
4.5  Radius of terminal line 1680 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  301.38  160.73  -1.12
4.5  Radius of terminal line 1712 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  303.68  177.91  0.8
4.3  Radius of line 1713 at 0.592 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  294.29  193.09  -3.91
4.5  Radius of terminal line 1773 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  287.37  174.05  1.8
4.3  Radius of line 1774 at 0.712 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  293.88  194.12  -3.99
4.3  Radius of line 1775 at 0.71 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  294.31  193.84  -4.03
4.3  Radius of line 1776 at 0.574 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  294.8  193.69  -3.98
4.5  Radius of terminal line 1791 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  300.43  195.52  -3.52
4.3  Radius of line 1792 at 0.561 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  294.15  194.38  -3.99
4.5  Radius of terminal line 1808 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  299.83  197.56  -3.55
4.5  Radius of terminal line 2038 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  227.93  197.72  -4.65
4.5  Radius of terminal line 2074 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  223.58  203.6  0.88
4.5  Radius of terminal line 2088 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  245.29  218.71  -0.45
4.5  Radius of terminal line 2167 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  237.46  235.23  1.39
4.5  Radius of terminal line 2220 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  260.61  225.59  -4.65
4.5  Radius of terminal line 2278 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  287.22  224.49  -0.82
4.5  Radius of terminal line 2291 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  281.12  214.48  0.38
4.5  Radius of terminal line 2398 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  247.2  206.19  1.39
4.5  Radius of terminal line 2421 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  248.94  212.96  -2.63
4.5  Radius of terminal line 2497 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  260.01  205.09  2.21
4.5  Radius of terminal line 2704 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  218.52  178.04  -1.12
4.5  Radius of terminal line 2722 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  215.44  172.69  1.89
4.5  Radius of terminal line 2744 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  225.94  171.82  -0.88
4.5  Radius of terminal line 2795 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  237.02  177.3  -1.12
4.5  Radius of terminal line 2886 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  230.39  190.59  -2.63
4.5  Radius of terminal line 2965 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  241.24  196.72  -4.65
4.5  Radius of terminal line 2982 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  249.48  192.07  -0.11
4.5  Radius of terminal line 3071 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  251.72  165.18  0.39
4.5  Radius of terminal line 3088 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  282.8  186.82  -4.43
4.5  Radius of terminal line 3102 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  288.99  198.28  -3.22
4.5  Radius of terminal line 3117 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  291.69  200.43  -3.23
4.5  Radius of terminal line 3131 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  295.23  200.35  -3.63
4.5  Radius of terminal line 3144 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  290.1  198.9  -3.33
2.5  Seg length ending at pt. 3 <= 0.1 at 0.0592.  (removed)
     A       X, Y, Z:  293.53  195.1  -3.3
2.4  Seg length ending at pt. 2039 >= 6.0 stdevs above mean at 0.6351.  (no action taken)
     B1      X, Y, Z:  236.08  206.77  -0.33
2.4  Seg length ending at pt. 2796 >= 6.0 stdevs above mean at 0.7044.  (no action taken)
     B1      X, Y, Z:  257.1  177.05  -1.28
2.4  Seg length ending at pt. 3118 >= 6.0 stdevs above mean at 0.6344.  (no action taken)
     B1      X, Y, Z:  293.6  195.41  -3.8
2.4  Seg length ending at pt. 3132 >= 6.0 stdevs above mean at 0.6461.  (no action taken)
     B1      X, Y, Z:  293.08  195.08  -3.74
2.1  Line 2 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  293.5  195.11  -3.25
 
 


Number of type A irregularities = 1
Number of type B1 irregularities = 66
Number of type B2 irregularities = 0
Number of type C irregularities = 0
