# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\RealAstrocyteSkeleton1.swc.swc created with StdSwc version 1.31 on 10/25/18.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\RealAstrocyteSkeleton1.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.3  Radius of line 4 at 15.66 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  219.0  196.2  63.32
4.3  Radius of line 12 at 17.39 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  217.8  199.0  62.0
4.3  Radius of line 191 at 16.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  221.0  197.0  62.0
4.3  Radius of line 254 at 16.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  221.0  197.0  62.0
4.5  Radius of terminal line 540 at 15.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  218.8  207.4  63.27
2.4  Seg length ending at pt. 22 >= 6.0 stdevs above mean at 32.7176.  (no action taken)
     B1      X, Y, Z:  143.0  193.0  57.2
2.4  Seg length ending at pt. 24 >= 6.0 stdevs above mean at 37.6141.  (no action taken)
     B1      X, Y, Z:  143.0  193.0  57.2
2.5  Seg length ending at pt. 70 <= 0.1 at 0.0245.  (removed)
     A       X, Y, Z:  129.59  101.6  76.87
2.5  Seg length ending at pt. 72 <= 0.1 at 0.0245.  (removed)
     A       X, Y, Z:  129.59  101.6  76.87
2.5  Seg length ending at pt. 400 <= 0.1 at 0.03.  (removed)
     A       X, Y, Z:  358.9  255.5  83.79
2.5  Seg length ending at pt. 636 <= 0.1 at 0.0224.  (removed)
     A       X, Y, Z:  196.9  269.0  69.59
2.5  Seg length ending at pt. 648 <= 0.1 at 0.0224.  (removed)
     A       X, Y, Z:  196.9  269.0  69.59
2.7  Line 540 of rad 15.0 is an included side branch.  (removed)
     A      X, Y, Z:  218.8  207.4  63.27
2.6  Line 21 and line 22 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  143.0  193.0  57.2
2.6  Line 21 and line 24 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  143.0  193.0  57.2
2.6  Line 22 and line 24 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  143.0  193.0  57.2
2.6  Line 30 and line 115 have the same coordinates.  (second line removed)
     A      X, Y, Z:  215.2  194.8  61.85
2.6  Line 35 and line 36 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  199.3  165.0  67.9
2.6  Line 35 and line 45 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  199.3  165.0  67.9
2.6  Line 36 and line 45 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  199.3  165.0  67.9
2.6  Line 51 and line 78 have the same coordinates.  (second line removed)
     A      X, Y, Z:  177.7  121.0  70.0
2.6  Line 54 and line 60 have the same coordinates.  (second line removed)
     A      X, Y, Z:  161.5  114.5  72.9
2.6  Line 64 and line 68 have the same coordinates.  (second line removed)
     A      X, Y, Z:  133.09  101.1  76.18
2.6  Line 79 and line 93 have the same coordinates.  (second line removed)
     A      X, Y, Z:  177.0  113.0  69.96
2.6  Line 83 and line 87 have the same coordinates.  (second line removed)
     A      X, Y, Z:  195.0  98.68  68.2
2.6  Line 96 and line 102 have the same coordinates.  (second line removed)
     A      X, Y, Z:  182.6  87.0  67.1
2.6  Line 103 and line 108 have the same coordinates.  (second line removed)
     A      X, Y, Z:  183.4  85.0  67.01
2.6  Line 118 and line 119 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  211.6  175.7  51.0
2.6  Line 118 and line 138 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  211.6  175.7  51.0
2.6  Line 119 and line 138 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  211.6  175.7  51.0
2.6  Line 121 and line 125 have the same coordinates.  (second line removed)
     A      X, Y, Z:  205.0  173.5  50.67
2.6  Line 127 and line 130 have the same coordinates.  (second line removed)
     A      X, Y, Z:  195.0  171.0  48.37
2.6  Line 140 and line 166 have the same coordinates.  (second line removed)
     A      X, Y, Z:  214.9  173.3  47.03
2.6  Line 145 and line 158 have the same coordinates.  (second line removed)
     A      X, Y, Z:  199.8  195.0  38.49
2.6  Line 147 and line 150 have the same coordinates.  (second line removed)
     A      X, Y, Z:  193.0  197.0  36.45
2.6  Line 169 and line 173 have the same coordinates.  (second line removed)
     A      X, Y, Z:  225.7  188.3  35.0
2.6  Line 175 and line 182 have the same coordinates.  (second line removed)
     A      X, Y, Z:  235.2  195.3  29.48
2.6  Line 177 and line 180 have the same coordinates.  (second line removed)
     A      X, Y, Z:  235.0  194.6  26.01
2.6  Line 186 and line 189 have the same coordinates.  (second line removed)
     A      X, Y, Z:  264.0  195.0  31.55
2.6  Line 191 and line 255 have the same coordinates.  (second line removed)
     A      X, Y, Z:  221.0  197.0  62.0
2.6  Line 196 and line 197 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  243.0  181.5  78.21
2.6  Line 196 and line 210 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  243.0  181.5  78.21
2.6  Line 197 and line 210 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  243.0  181.5  78.21
2.6  Line 216 and line 225 have the same coordinates.  (second line removed)
     A      X, Y, Z:  288.5  183.5  85.43
2.6  Line 228 and line 236 have the same coordinates.  (second line removed)
     A      X, Y, Z:  306.9  182.3  91.84
2.6  Line 237 and line 249 have the same coordinates.  (second line removed)
     A      X, Y, Z:  305.4  175.0  94.2
2.6  Line 241 and line 245 have the same coordinates.  (second line removed)
     A      X, Y, Z:  285.1  177.0  97.1
2.6  Line 258 and line 259 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  245.0  186.1  59.0
2.6  Line 258 and line 278 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  245.0  186.1  59.0
2.6  Line 259 and line 278 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  245.0  186.1  59.0
2.6  Line 263 and line 269 have the same coordinates.  (second line removed)
     A      X, Y, Z:  254.5  167.0  56.95
2.6  Line 272 and line 276 have the same coordinates.  (second line removed)
     A      X, Y, Z:  249.0  143.0  56.78
2.6  Line 284 and line 287 have the same coordinates.  (second line removed)
     A      X, Y, Z:  286.9  208.4  61.95
2.6  Line 291 and line 297 have the same coordinates.  (second line removed)
     A      X, Y, Z:  320.1  229.2  58.96
2.6  Line 313 and line 314 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  261.0  212.6  74.29
2.6  Line 313 and line 352 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  261.0  212.6  74.29
2.6  Line 314 and line 352 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  261.0  212.6  74.29
2.6  Line 327 and line 340 have the same coordinates.  (second line removed)
     A      X, Y, Z:  303.8  316.9  74.81
2.6  Line 356 and line 383 have the same coordinates.  (second line removed)
     A      X, Y, Z:  285.0  224.3  77.0
2.6  Line 369 and line 373 have the same coordinates.  (second line removed)
     A      X, Y, Z:  343.3  318.9  88.57
2.6  Line 387 and line 412 have the same coordinates.  (second line removed)
     A      X, Y, Z:  314.5  239.2  77.64
2.6  Line 393 and line 401 have the same coordinates.  (second line removed)
     A      X, Y, Z:  358.9  255.5  83.76
2.6  Line 415 and line 425 have the same coordinates.  (second line removed)
     A      X, Y, Z:  327.3  259.19  74.26
2.6  Line 436 and line 442 have the same coordinates.  (second line removed)
     A      X, Y, Z:  360.5  349.0  64.71
2.6  Line 450 and line 464 have the same coordinates.  (second line removed)
     A      X, Y, Z:  222.9  203.2  61.84
2.6  Line 467 and line 468 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  232.7  221.0  58.74
2.6  Line 467 and line 519 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  232.7  221.0  58.74
2.6  Line 468 and line 519 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  232.7  221.0  58.74
2.6  Line 472 and line 475 have the same coordinates.  (second line removed)
     A      X, Y, Z:  247.1  243.0  55.07
2.6  Line 478 and line 481 have the same coordinates.  (second line removed)
     A      X, Y, Z:  249.0  264.1  49.89
2.6  Line 485 and line 491 have the same coordinates.  (second line removed)
     A      X, Y, Z:  253.6  290.69  41.77
2.6  Line 493 and line 504 have the same coordinates.  (second line removed)
     A      X, Y, Z:  264.19  301.0  33.0
2.6  Line 496 and line 499 have the same coordinates.  (second line removed)
     A      X, Y, Z:  272.8  307.1  30.85
2.6  Line 505 and line 510 have the same coordinates.  (second line removed)
     A      X, Y, Z:  261.3  300.4  26.01
2.6  Line 512 and line 516 have the same coordinates.  (second line removed)
     A      X, Y, Z:  269.0  291.9  18.64
2.6  Line 526 and line 529 have the same coordinates.  (second line removed)
     A      X, Y, Z:  254.8  221.9  26.12
2.6  Line 532 and line 536 have the same coordinates.  (second line removed)
     A      X, Y, Z:  248.8  241.0  15.0
2.6  Line 539 and line 593 have the same coordinates.  (second line removed)
     A      X, Y, Z:  218.7  207.0  63.32
2.6  Line 546 and line 552 have the same coordinates.  (second line removed)
     A      X, Y, Z:  221.0  247.0  61.81
2.6  Line 560 and line 577 have the same coordinates.  (second line removed)
     A      X, Y, Z:  241.2  317.0  54.35
2.6  Line 563 and line 566 have the same coordinates.  (second line removed)
     A      X, Y, Z:  235.5  330.8  55.31
2.6  Line 568 and line 572 have the same coordinates.  (second line removed)
     A      X, Y, Z:  231.5  347.0  49.96
2.6  Line 578 and line 582 have the same coordinates.  (second line removed)
     A      X, Y, Z:  244.4  324.5  55.25
2.6  Line 596 and line 597 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  215.0  229.0  66.31
2.6  Line 596 and line 607 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  215.0  229.0  66.31
2.6  Line 597 and line 607 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  215.0  229.0  66.31
2.6  Line 609 and line 612 have the same coordinates.  (second line removed)
     A      X, Y, Z:  214.7  234.8  67.76
2.6  Line 616 and line 634 have the same coordinates.  (second line removed)
     A      X, Y, Z:  199.4  261.69  69.62
2.6  Line 652 and line 656 have the same coordinates.  (second line removed)
     A      X, Y, Z:  181.9  283.69  74.4
2.6  Line 660 and line 664 have the same coordinates.  (second line removed)
     A      X, Y, Z:  183.4  315.0  85.9
2.6  Line 665 and line 673 have the same coordinates.  (second line removed)
     A      X, Y, Z:  184.4  319.0  86.03
2.6  Line 695 and line 702 have the same coordinates.  (second line removed)
     A      X, Y, Z:  200.8  416.9  57.91
2.6  Line 703 and line 708 have the same coordinates.  (second line removed)
     A      X, Y, Z:  198.9  422.1  58.21
2.6  Line 710 and line 714 have the same coordinates.  (second line removed)
     A      X, Y, Z:  186.8  432.1  64.34
4.4  Line 10 of rad 2.0 links to 9 of rad 1.0.  (no action taken)
     B1      X, Y, Z:  208.3  142.9  83.75
4.4  Line 19 of rad 3.657 links to 18 of rad 1.0.  (no action taken)
     B1      X, Y, Z:  162.5  191.3  57.07
4.4  Line 21 of rad 4.0 links to 20 of rad 2.0.  (no action taken)
     B1      X, Y, Z:  143.0  193.0  57.2
4.4  Line 22 of rad 4.0 links to 17 of rad 1.0.  (no action taken)
     B1      X, Y, Z:  143.0  193.0  57.2
4.4  Line 68 of rad 3.0 links to 63 of rad 1.0.  (no action taken)
     B1      X, Y, Z:  131.34  101.35  76.53
4.4  Line 88 of rad 2.887 links to 87 of rad 1.17.  (no action taken)
     B1      X, Y, Z:  206.9  94.32  74.06
4.4  Line 132 of rad 3.27 links to 131 of rad 1.0.  (no action taken)
     B1      X, Y, Z:  169.0  165.5  52.25
4.4  Line 134 of rad 3.0 links to 133 of rad 1.0.  (no action taken)
     B1      X, Y, Z:  156.5  150.59  50.17
4.4  Line 164 of rad 3.0 links to 163 of rad 1.0.  (no action taken)
     B1      X, Y, Z:  177.0  219.0  26.0
4.4  Line 227 of rad 5.0 links to 226 of rad 2.321.  (no action taken)
     B1      X, Y, Z:  303.25  184.55  90.37
4.4  Line 252 of rad 2.0 links to 251 of rad 1.0.  (no action taken)
     B1      X, Y, Z:  309.5  148.8  105.7
4.4  Line 300 of rad 3.0 links to 299 of rad 1.0.  (no action taken)
     B1      X, Y, Z:  339.0  263.19  56.14
4.4  Line 303 of rad 2.0 links to 302 of rad 1.0.  (no action taken)
     B1      X, Y, Z:  364.4  277.4  56.49
4.4  Line 345 of rad 2.0 links to 344 of rad 1.0.  (no action taken)
     B1      X, Y, Z:  323.0  368.2  67.57
4.4  Line 348 of rad 2.0 links to 347 of rad 1.0.  (no action taken)
     B1      X, Y, Z:  329.6  396.0  70.04
4.4  Line 362 of rad 3.0 links to 361 of rad 1.0.  (no action taken)
     B1      X, Y, Z:  316.0  267.4  85.21
4.4  Line 364 of rad 3.0 links to 363 of rad 1.0.  (no action taken)
     B1      X, Y, Z:  328.9  282.5  86.0
4.4  Line 377 of rad 2.997 links to 376 of rad 1.0.  (no action taken)
     B1      X, Y, Z:  356.6  359.0  86.03
4.4  Line 404 of rad 2.907 links to 403 of rad 1.0.  (no action taken)
     B1      X, Y, Z:  389.1  277.1  87.67
4.4  Line 488 of rad 2.843 links to 487 of rad 1.268.  (no action taken)
     B1      X, Y, Z:  246.3  310.6  42.28
4.4  Line 573 of rad 2.0 links to 572 of rad 1.0.  (no action taken)
     B1      X, Y, Z:  233.0  357.7  48.28
4.4  Line 602 of rad 3.0 links to 601 of rad 1.0.  (no action taken)
     B1      X, Y, Z:  174.9  239.0  61.71
4.4  Line 621 of rad 3.666 links to 620 of rad 1.127.  (no action taken)
     B1      X, Y, Z:  159.7  264.5  70.18
4.4  Line 696 of rad 2.486 links to 695 of rad 1.0.  (no action taken)
     B1      X, Y, Z:  202.4  418.5  57.98
4.4  Line 702 of rad 2.0 links to 694 of rad 1.0.  (no action taken)
     B1      X, Y, Z:  199.85  419.5  58.06
2.1  Line 1 has 12 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  201.0  199.0  62.0
 
 


Number of type A irregularities = 63
Number of type B1 irregularities = 57
Number of type B2 irregularities = 0
Number of type C irregularities = 0
