# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\M8Neuron6Imaris.ims.swc.swc created with StdSwc version 1.31 on 12/11/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\M8Neuron6Imaris.ims.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  89.1  122.27  3.91
4.3  Radius of line 2 at 4.599 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  89.14  122.31  3.94
4.3  Radius of line 3 at 4.599 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  89.17  122.35  3.96
4.3  Radius of line 4 at 4.599 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  89.25  122.43  4.01
4.3  Radius of line 5 at 4.599 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  89.4  122.58  4.1
4.3  Radius of line 144 at 9.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  89.1  122.27  3.91
4.3  Radius of line 145 at 4.599 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  89.24  122.67  4.09
4.3  Radius of line 368 at 9.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  89.1  122.27  3.91
4.3  Radius of line 369 at 4.599 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  89.23  121.8  3.93
4.3  Radius of line 1604 at 9.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  89.1  122.27  3.91
4.3  Radius of line 1605 at 4.599 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  89.53  122.15  4.03
4.3  Radius of line 2795 at 9.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  89.1  122.27  3.91
4.3  Radius of line 2796 at 4.41 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  88.81  122.11  3.94
4.5  Radius of terminal line 3680 at 0.198 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  32.17  97.49  3.68
2.5  Seg length ending at pt. 2 <= 0.1 at 0.064.  (removed)
     A       X, Y, Z:  89.14  122.31  3.94
2.5  Seg length ending at pt. 439 <= 0.1 at 0.086.  (removed)
     A       X, Y, Z:  88.44  113.97  6.42
2.5  Seg length ending at pt. 522 <= 0.1 at 0.086.  (removed)
     A       X, Y, Z:  87.33  111.24  1.88
2.5  Seg length ending at pt. 740 <= 0.1 at 0.0574.  (removed)
     A       X, Y, Z:  79.02  100.05  5.28
2.5  Seg length ending at pt. 744 <= 0.1 at 0.0616.  (removed)
     A       X, Y, Z:  79.02  100.15  5.24
2.5  Seg length ending at pt. 760 <= 0.1 at 0.0539.  (removed)
     A       X, Y, Z:  78.8  99.93  5.3
2.5  Seg length ending at pt. 1015 <= 0.1 at 0.0995.  (removed)
     A       X, Y, Z:  78.44  90.67  6.16
2.5  Seg length ending at pt. 1028 <= 0.1 at 0.099.  (removed)
     A       X, Y, Z:  79.87  90.77  6.28
2.5  Seg length ending at pt. 1163 <= 0.1 at 0.086.  (removed)
     A       X, Y, Z:  78.52  82.93  7.32
2.5  Seg length ending at pt. 1235 <= 0.1 at 0.0583.  (removed)
     A       X, Y, Z:  76.52  81.42  7.64
2.5  Seg length ending at pt. 1272 <= 0.1 at 0.0995.  (removed)
     A       X, Y, Z:  75.9  80.6  7.73
2.5  Seg length ending at pt. 1335 <= 0.1 at 0.097.  (removed)
     A       X, Y, Z:  82.11  104.29  4.47
2.5  Seg length ending at pt. 1344 <= 0.1 at 0.0954.  (removed)
     A       X, Y, Z:  82.04  104.31  4.41
2.5  Seg length ending at pt. 1362 <= 0.1 at 0.0883.  (removed)
     A       X, Y, Z:  80.62  103.35  4.29
2.5  Seg length ending at pt. 1426 <= 0.1 at 0.0854.  (removed)
     A       X, Y, Z:  73.21  99.51  4.02
2.5  Seg length ending at pt. 1445 <= 0.1 at 0.099.  (removed)
     A       X, Y, Z:  72.79  98.92  3.87
2.5  Seg length ending at pt. 1574 <= 0.1 at 0.0837.  (removed)
     A       X, Y, Z:  66.36  87.07  3.98
2.5  Seg length ending at pt. 1604 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  89.1  122.27  3.91
2.5  Seg length ending at pt. 1878 <= 0.1 at 0.0949.  (removed)
     A       X, Y, Z:  113.7  104.12  5.07
2.5  Seg length ending at pt. 1881 <= 0.1 at 0.0985.  (removed)
     A       X, Y, Z:  113.77  104.12  5.09
2.5  Seg length ending at pt. 2138 <= 0.1 at 0.09.  (removed)
     A       X, Y, Z:  115.43  97.33  4.77
2.5  Seg length ending at pt. 2252 <= 0.1 at 0.0583.  (removed)
     A       X, Y, Z:  122.62  89.02  5.12
2.5  Seg length ending at pt. 2254 <= 0.1 at 0.0768.  (removed)
     A       X, Y, Z:  122.56  89.14  5.13
2.5  Seg length ending at pt. 2256 <= 0.1 at 0.0854.  (removed)
     A       X, Y, Z:  122.55  89.26  5.21
2.5  Seg length ending at pt. 2296 <= 0.1 at 0.099.  (removed)
     A       X, Y, Z:  127.53  84.14  5.24
2.5  Seg length ending at pt. 2324 <= 0.1 at 0.0224.  (removed)
     A       X, Y, Z:  131.2  84.14  5.63
2.5  Seg length ending at pt. 2326 <= 0.1 at 0.0332.  (removed)
     A       X, Y, Z:  131.22  84.19  5.61
2.5  Seg length ending at pt. 2795 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  89.1  122.27  3.91
2.5  Seg length ending at pt. 3095 <= 0.1 at 0.05.  (removed)
     A       X, Y, Z:  59.99  92.33  4.87
2.5  Seg length ending at pt. 3097 <= 0.1 at 0.0894.  (removed)
     A       X, Y, Z:  59.99  92.2  4.81
2.5  Seg length ending at pt. 3108 <= 0.1 at 0.0787.  (removed)
     A       X, Y, Z:  59.98  92.22  4.8
2.5  Seg length ending at pt. 3179 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  56.98  90.86  4.9
2.5  Seg length ending at pt. 3344 <= 0.1 at 0.0663.  (removed)
     A       X, Y, Z:  76.65  116.32  3.26
2.5  Seg length ending at pt. 3773 <= 0.1 at 0.0985.  (removed)
     A       X, Y, Z:  55.13  121.37  4.33
2.5  Seg length ending at pt. 2325 <= 0.1 at 0.0458.  (removed)
     A       X, Y, Z:  131.21  84.16  5.62
2.6  Line 1 and line 144 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  89.1  122.27  3.91
2.6  Line 1 and line 368 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  89.1  122.27  3.91
2.6  Line 144 and line 368 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  89.1  122.27  3.91
2.6  Line 1279 and line 1294 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  79.31  84.86  6.89
2.6  Line 1363 and line 1368 have the same coordinates.  (second line removed)
     A      X, Y, Z:  80.57  103.42  4.3
2.6  Line 2343 and line 2359 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  130.88  85.23  6.89
2.6  Line 3101 and line 3132 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  60.28  91.69  4.83
4.4  Line 3723 of rad 0.4 links to 3701 of rad 0.144.  (no action taken)
     B1      X, Y, Z:  57.14  114.07  4.28
2.1  Line 1 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  89.1  122.27  3.91
2.1  Line 521 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  87.26  111.19  1.88
2.1  Line 739 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  79.04  100.0  5.3
2.1  Line 759 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  78.84  99.9  5.32
2.1  Line 1014 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  78.37  90.72  6.11
2.1  Line 1162 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  78.51  83.01  7.29
2.1  Line 1234 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  76.57  81.39  7.64
2.1  Line 1361 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  80.67  103.28  4.27
2.1  Line 1425 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  73.27  99.45  4.01
2.1  Line 1444 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  72.82  98.84  3.92
2.1  Line 1573 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  66.42  87.04  3.93
2.1  Line 2137 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  115.39  97.32  4.69
2.1  Line 2323 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  131.2  84.12  5.64
2.1  Line 3094 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  59.99  92.37  4.9
2.1  Line 3343 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  76.63  116.26  3.28
 
 


Number of type A irregularities = 36
Number of type B1 irregularities = 36
Number of type B2 irregularities = 0
Number of type C irregularities = 0
