# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\M8Neuron5Imaris.ims.swc.swc created with StdSwc version 1.31 on 12/11/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\M8Neuron5Imaris.ims.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  85.54  53.77  2.51
4.3  Radius of line 2 at 4.966 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  85.54  53.75  2.51
4.3  Radius of line 3 at 4.966 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  85.54  53.73  2.5
4.3  Radius of line 4 at 4.966 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  85.53  53.7  2.5
4.3  Radius of line 5 at 4.966 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  85.53  53.63  2.48
4.3  Radius of line 6 at 4.966 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  85.51  53.48  2.45
4.3  Radius of line 7 at 4.966 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  85.47  53.2  2.4
4.3  Radius of line 56 at 9.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  85.54  53.77  2.51
4.3  Radius of line 57 at 4.966 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  85.13  54.05  2.51
4.3  Radius of line 236 at 9.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  85.54  53.77  2.51
4.3  Radius of line 237 at 4.966 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  85.87  54.03  2.5
4.3  Radius of line 337 at 9.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  85.54  53.77  2.51
4.3  Radius of line 338 at 4.966 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  85.98  53.52  2.43
4.5  Radius of terminal line 387 at 0.22 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  91.6  46.37  2.15
4.3  Radius of line 605 at 9.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  85.54  53.77  2.51
4.3  Radius of line 606 at 4.988 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  84.97  53.52  2.46
4.3  Radius of line 1146 at 9.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  85.54  53.77  2.51
4.3  Radius of line 1147 at 4.966 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  85.78  54.22  2.52
4.3  Radius of line 1712 at 9.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  85.54  53.77  2.51
4.3  Radius of line 1713 at 4.966 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  85.53  53.99  2.5
2.5  Seg length ending at pt. 2 <= 0.1 at 0.02.  (removed)
     A       X, Y, Z:  85.54  53.75  2.51
2.5  Seg length ending at pt. 4 <= 0.1 at 0.0316.  (removed)
     A       X, Y, Z:  85.53  53.7  2.5
2.5  Seg length ending at pt. 129 <= 0.1 at 0.0245.  (removed)
     A       X, Y, Z:  77.51  56.06  2.06
2.5  Seg length ending at pt. 131 <= 0.1 at 0.0539.  (removed)
     A       X, Y, Z:  77.46  56.12  2.03
2.5  Seg length ending at pt. 159 <= 0.1 at 0.0831.  (removed)
     A       X, Y, Z:  76.29  55.68  1.94
2.5  Seg length ending at pt. 337 <= 0.1 at 0.0412.  (removed)
     A       X, Y, Z:  85.54  53.77  2.51
2.5  Seg length ending at pt. 384 <= 0.1 at 0.0883.  (removed)
     A       X, Y, Z:  91.69  46.47  1.85
2.5  Seg length ending at pt. 507 <= 0.1 at 0.0917.  (removed)
     A       X, Y, Z:  91.02  35.34  2.89
2.5  Seg length ending at pt. 514 <= 0.1 at 0.0849.  (removed)
     A       X, Y, Z:  91.36  34.56  3.11
2.5  Seg length ending at pt. 605 <= 0.1 at 0.0412.  (removed)
     A       X, Y, Z:  85.54  53.77  2.51
2.4  Seg length ending at pt. 606 >= 6.0 stdevs above mean at 0.6088.  (no action taken)
     B1      X, Y, Z:  84.97  53.52  2.46
2.5  Seg length ending at pt. 646 <= 0.1 at 0.099.  (removed)
     A       X, Y, Z:  77.94  51.04  2.28
2.5  Seg length ending at pt. 845 <= 0.1 at 0.0866.  (removed)
     A       X, Y, Z:  80.41  43.57  1.49
2.5  Seg length ending at pt. 892 <= 0.1 at 0.0374.  (removed)
     A       X, Y, Z:  79.02  41.62  2.3
2.5  Seg length ending at pt. 894 <= 0.1 at 0.086.  (removed)
     A       X, Y, Z:  78.91  41.58  2.36
2.5  Seg length ending at pt. 905 <= 0.1 at 0.0781.  (removed)
     A       X, Y, Z:  78.92  41.57  2.35
2.5  Seg length ending at pt. 956 <= 0.1 at 0.0954.  (removed)
     A       X, Y, Z:  78.47  41.06  2.26
2.5  Seg length ending at pt. 1146 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  85.54  53.77  2.51
2.4  Seg length ending at pt. 1147 >= 6.0 stdevs above mean at 0.5101.  (no action taken)
     B1      X, Y, Z:  85.78  54.22  2.52
2.5  Seg length ending at pt. 1216 <= 0.1 at 0.0728.  (removed)
     A       X, Y, Z:  100.41  60.24  1.52
2.5  Seg length ending at pt. 1301 <= 0.1 at 0.0825.  (removed)
     A       X, Y, Z:  112.16  69.58  1.27
2.5  Seg length ending at pt. 1632 <= 0.1 at 0.0648.  (removed)
     A       X, Y, Z:  131.83  84.59  2.33
2.5  Seg length ending at pt. 1634 <= 0.1 at 0.0436.  (removed)
     A       X, Y, Z:  131.88  84.61  2.29
2.5  Seg length ending at pt. 1665 <= 0.1 at 0.0949.  (removed)
     A       X, Y, Z:  136.45  87.23  2.27
2.5  Seg length ending at pt. 1712 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  85.54  53.77  2.51
2.5  Seg length ending at pt. 1835 <= 0.1 at 0.0906.  (removed)
     A       X, Y, Z:  99.98  70.36  1.8
2.5  Seg length ending at pt. 1873 <= 0.1 at 0.097.  (removed)
     A       X, Y, Z:  102.92  71.28  2.04
2.5  Seg length ending at pt. 1938 <= 0.1 at 0.0964.  (removed)
     A       X, Y, Z:  104.09  73.33  2.24
2.5  Seg length ending at pt. 2159 <= 0.1 at 0.0906.  (removed)
     A       X, Y, Z:  92.59  78.84  1.26
2.5  Seg length ending at pt. 2381 <= 0.1 at 0.0825.  (removed)
     A       X, Y, Z:  97.85  98.53  1.87
2.5  Seg length ending at pt. 2426 <= 0.1 at 0.0787.  (removed)
     A       X, Y, Z:  97.85  99.01  1.83
2.5  Seg length ending at pt. 2543 <= 0.1 at 0.0877.  (removed)
     A       X, Y, Z:  97.77  104.3  2.1
2.5  Seg length ending at pt. 2857 <= 0.1 at 0.0806.  (removed)
     A       X, Y, Z:  107.67  134.68  2.59
2.5  Seg length ending at pt. 2886 <= 0.1 at 0.0748.  (removed)
     A       X, Y, Z:  108.1  136.86  2.53
2.5  Seg length ending at pt. 3 <= 0.1 at 0.0412.  (removed)
     A       X, Y, Z:  85.54  53.73  2.5
2.5  Seg length ending at pt. 130 <= 0.1 at 0.0539.  (removed)
     A       X, Y, Z:  77.49  56.08  2.05
2.5  Seg length ending at pt. 893 <= 0.1 at 0.0831.  (removed)
     A       X, Y, Z:  78.98  41.61  2.32
2.5  Seg length ending at pt. 1633 <= 0.1 at 0.099.  (removed)
     A       X, Y, Z:  131.85  84.58  2.3
2.6  Line 1 and line 56 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  85.54  53.77  2.51
2.6  Line 1 and line 236 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  85.54  53.77  2.51
2.6  Line 56 and line 236 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  85.54  53.77  2.51
2.1  Line 1 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  85.54  53.77  2.51
2.1  Line 128 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  77.52  56.04  2.07
2.1  Line 158 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  76.3  55.6  1.96
2.1  Line 383 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  91.74  46.45  1.78
2.1  Line 513 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  91.42  34.56  3.17
2.1  Line 891 has 4 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  79.05  41.63  2.28
2.1  Line 955 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  78.56  41.09  2.25
2.1  Line 1215 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  100.41  60.17  1.54
2.1  Line 1300 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  112.12  69.62  1.21
2.1  Line 1664 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  136.4  87.3  2.23
2.1  Line 1872 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  102.83  71.25  2.06
2.1  Line 1937 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  104.11  73.25  2.29
2.1  Line 2158 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  92.59  78.83  1.17
2.1  Line 2380 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  97.85  98.51  1.79
2.1  Line 2425 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  97.87  98.98  1.76
2.1  Line 2542 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  97.75  104.38  2.13
2.1  Line 2856 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  107.6  134.68  2.63
2.1  Line 2885 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  108.16  136.82  2.55
 
 


Number of type A irregularities = 36
Number of type B1 irregularities = 43
Number of type B2 irregularities = 0
Number of type C irregularities = 0
