# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\M8Neuron4Imaris.ims.swc.swc created with StdSwc version 1.31 on 12/11/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\M8Neuron4Imaris.ims.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  98.05  73.14  5.2
4.3  Radius of line 2 at 2.3 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  97.62  73.07  5.24
4.3  Radius of line 3 at 1.074 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  97.57  73.06  5.25
4.3  Radius of line 4 at 1.074 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  97.53  73.05  5.25
4.3  Radius of line 5 at 1.074 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  97.44  73.02  5.26
4.3  Radius of line 6 at 1.074 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  97.27  72.98  5.28
4.3  Radius of line 131 at 0.438 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  83.88  53.63  9.28
4.3  Radius of line 132 at 0.495 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  83.75  53.46  9.31
4.3  Radius of line 133 at 0.545 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  83.62  53.29  9.33
4.3  Radius of line 134 at 0.561 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  83.49  53.11  9.34
4.3  Radius of line 135 at 0.547 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  83.35  52.93  9.33
4.3  Radius of line 136 at 0.508 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  83.21  52.76  9.32
4.3  Radius of line 137 at 0.464 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  83.07  52.59  9.3
4.3  Radius of line 384 at 0.431 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  83.25  52.67  9.3
4.3  Radius of line 389 at 0.453 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  83.49  52.93  9.29
4.3  Radius of line 394 at 0.452 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  83.48  53.28  9.29
4.3  Radius of line 400 at 0.421 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  83.74  53.18  9.26
4.3  Radius of line 732 at 1.074 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  97.59  72.71  5.24
4.3  Radius of line 1697 at 1.074 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  97.96  73.65  5.29
4.3  Radius of line 3609 at 1.074 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  97.46  73.27  5.28
4.5  Radius of terminal line 3958 at 0.45 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  52.13  24.59  5.32
4.3  Radius of line 4248 at 1.074 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  97.48  73.41  5.29
2.5  Seg length ending at pt. 3 <= 0.1 at 0.052.  (removed)
     A       X, Y, Z:  97.57  73.06  5.25
2.5  Seg length ending at pt. 5 <= 0.1 at 0.0954.  (removed)
     A       X, Y, Z:  97.44  73.02  5.26
2.5  Seg length ending at pt. 52 <= 0.1 at 0.052.  (removed)
     A       X, Y, Z:  91.59  65.22  6.46
2.5  Seg length ending at pt. 114 <= 0.1 at 0.0911.  (removed)
     A       X, Y, Z:  85.6  55.61  8.4
2.5  Seg length ending at pt. 117 <= 0.1 at 0.097.  (removed)
     A       X, Y, Z:  85.37  55.31  8.52
2.5  Seg length ending at pt. 1041 <= 0.1 at 0.099.  (removed)
     A       X, Y, Z:  83.73  34.12  5.38
2.5  Seg length ending at pt. 1071 <= 0.1 at 0.097.  (removed)
     A       X, Y, Z:  83.98  37.0  6.21
2.5  Seg length ending at pt. 1357 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  97.65  64.57  7.2
2.5  Seg length ending at pt. 1359 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  97.65  64.57  7.2
2.5  Seg length ending at pt. 1361 <= 0.1 at 0.01.  (removed)
     A       X, Y, Z:  97.65  64.57  7.21
2.5  Seg length ending at pt. 1363 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  97.66  64.57  7.21
2.5  Seg length ending at pt. 1365 <= 0.1 at 0.0245.  (removed)
     A       X, Y, Z:  97.69  64.55  7.22
2.5  Seg length ending at pt. 1367 <= 0.1 at 0.099.  (removed)
     A       X, Y, Z:  97.81  64.47  7.27
2.4  Seg length ending at pt. 1697 >= 6.0 stdevs above mean at 0.7393.  (no action taken)
     B1      X, Y, Z:  97.96  73.65  5.29
2.5  Seg length ending at pt. 1938 <= 0.1 at 0.051.  (removed)
     A       X, Y, Z:  148.41  86.91  8.49
2.5  Seg length ending at pt. 1989 <= 0.1 at 0.051.  (removed)
     A       X, Y, Z:  158.16  86.86  8.54
2.5  Seg length ending at pt. 2016 <= 0.1 at 0.0616.  (removed)
     A       X, Y, Z:  163.54  87.82  8.77
2.5  Seg length ending at pt. 2044 <= 0.1 at 0.0632.  (removed)
     A       X, Y, Z:  168.56  90.75  9.46
2.5  Seg length ending at pt. 2346 <= 0.1 at 0.0906.  (removed)
     A       X, Y, Z:  159.83  86.97  8.48
2.5  Seg length ending at pt. 2443 <= 0.1 at 0.099.  (removed)
     A       X, Y, Z:  157.78  87.5  8.25
2.5  Seg length ending at pt. 2586 <= 0.1 at 0.0949.  (removed)
     A       X, Y, Z:  149.9  87.17  8.67
2.5  Seg length ending at pt. 2731 <= 0.1 at 0.0812.  (removed)
     A       X, Y, Z:  139.67  85.14  7.84
2.5  Seg length ending at pt. 2827 <= 0.1 at 0.0949.  (removed)
     A       X, Y, Z:  131.79  84.32  7.65
2.5  Seg length ending at pt. 2844 <= 0.1 at 0.0678.  (removed)
     A       X, Y, Z:  121.55  81.63  6.65
2.5  Seg length ending at pt. 2846 <= 0.1 at 0.0539.  (removed)
     A       X, Y, Z:  121.48  81.56  6.72
2.5  Seg length ending at pt. 2848 <= 0.1 at 0.0762.  (removed)
     A       X, Y, Z:  121.35  81.55  6.77
2.5  Seg length ending at pt. 3136 <= 0.1 at 0.0985.  (removed)
     A       X, Y, Z:  110.31  100.33  4.38
2.5  Seg length ending at pt. 3147 <= 0.1 at 0.097.  (removed)
     A       X, Y, Z:  112.15  94.2  4.45
2.5  Seg length ending at pt. 3292 <= 0.1 at 0.03.  (removed)
     A       X, Y, Z:  109.46  86.67  8.84
2.5  Seg length ending at pt. 3294 <= 0.1 at 0.0616.  (removed)
     A       X, Y, Z:  109.53  86.71  8.87
2.5  Seg length ending at pt. 3297 <= 0.1 at 0.0548.  (removed)
     A       X, Y, Z:  109.88  86.85  9.02
2.5  Seg length ending at pt. 4352 <= 0.1 at 0.0707.  (removed)
     A       X, Y, Z:  87.05  93.72  7.11
2.5  Seg length ending at pt. 4398 <= 0.1 at 0.0332.  (removed)
     A       X, Y, Z:  84.51  101.79  7.95
2.5  Seg length ending at pt. 4400 <= 0.1 at 0.052.  (removed)
     A       X, Y, Z:  84.5  101.87  7.96
2.5  Seg length ending at pt. 4519 <= 0.1 at 0.0995.  (removed)
     A       X, Y, Z:  68.75  117.86  6.74
2.5  Seg length ending at pt. 5114 <= 0.1 at 0.0917.  (removed)
     A       X, Y, Z:  88.34  101.34  6.63
2.5  Seg length ending at pt. 4 <= 0.1 at 0.0927.  (removed)
     A       X, Y, Z:  97.53  73.05  5.25
2.5  Seg length ending at pt. 1358 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  97.65  64.57  7.2
2.5  Seg length ending at pt. 1362 <= 0.1 at 0.0141.  (removed)
     A       X, Y, Z:  97.66  64.57  7.21
2.5  Seg length ending at pt. 1366 <= 0.1 at 0.0781.  (removed)
     A       X, Y, Z:  97.73  64.52  7.24
2.5  Seg length ending at pt. 3293 <= 0.1 at 0.0539.  (removed)
     A       X, Y, Z:  109.48  86.68  8.85
2.5  Seg length ending at pt. 4399 <= 0.1 at 0.0616.  (removed)
     A       X, Y, Z:  84.51  101.82  7.95
2.5  Seg length ending at pt. 1360 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  97.65  64.57  7.2
2.5  Seg length ending at pt. 1364 <= 0.1 at 0.0245.  (removed)
     A       X, Y, Z:  97.67  64.56  7.21
2.7  Line 3130 of rad 0.125 is an included side branch.  (removed)
     A      X, Y, Z:  110.13  100.43  4.5
2.6  Line 1454 and line 1468 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  100.82  62.64  7.69
2.6  Line 1455 and line 1469 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  100.75  62.55  7.67
2.6  Line 1507 and line 1551 have the same coordinates.  (second line removed)
     A      X, Y, Z:  97.53  64.52  7.25
2.6  Line 1507 and line 1611 have the same coordinates.  (second line removed)
     A      X, Y, Z:  97.53  64.52  7.25
2.6  Line 1507 and line 1646 have the same coordinates.  (second line removed)
     A      X, Y, Z:  97.53  64.52  7.25
2.6  Line 1508 and line 1551 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  97.41  64.46  7.27
2.6  Line 1508 and line 1646 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  97.41  64.46  7.27
2.6  Line 1509 and line 1647 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  97.28  64.41  7.28
2.6  Line 1510 and line 1648 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  97.15  64.36  7.29
2.6  Line 1510 and line 1666 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  97.15  64.36  7.29
2.6  Line 1512 and line 1650 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  96.93  64.23  7.3
2.6  Line 1512 and line 1668 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  96.93  64.23  7.3
2.6  Line 1529 and line 1573 have the same coordinates.  (second line removed)
     A      X, Y, Z:  97.52  64.53  7.28
2.6  Line 1530 and line 1573 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  97.39  64.47  7.3
2.6  Line 1534 and line 1632 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  96.92  64.23  7.3
2.6  Line 1551 and line 1647 have the same coordinates.  (second line removed)
     A      X, Y, Z:  97.41  64.46  7.27
2.6  Line 1589 and line 1678 have the same coordinates.  (second line removed)
     A      X, Y, Z:  97.5  64.53  7.28
2.6  Line 1648 and line 1666 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  97.15  64.36  7.29
2.6  Line 1649 and line 1667 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  97.04  64.3  7.29
2.6  Line 1650 and line 1668 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  96.93  64.23  7.3
2.6  Line 1663 and line 1691 have the same coordinates.  (second line removed)
     A      X, Y, Z:  97.53  64.53  7.27
2.6  Line 1664 and line 1691 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  97.4  64.47  7.3
2.6  Line 1665 and line 1692 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  97.28  64.42  7.3
2.6  Line 2541 and line 2560 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  151.57  87.78  8.87
2.6  Line 2930 and line 2950 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  111.71  78.35  6.28
2.6  Line 3478 and line 3506 have the same coordinates.  (second line removed)
     A      X, Y, Z:  109.36  86.76  8.77
2.6  Line 4837 and line 4848 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  68.92  117.9  6.77
2.6  Line 4838 and line 4849 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  68.98  118.05  6.83
4.4  Line 2 of rad 2.3 links to 1 of rad 0.125.  (no action taken)
     B1      X, Y, Z:  97.62  73.07  5.24
4.4  Line 1932 of rad 0.4 links to 1931 of rad 0.144.  (no action taken)
     B1      X, Y, Z:  147.22  86.84  8.39
4.4  Line 4351 of rad 0.4 links to 4350 of rad 0.187.  (no action taken)
     B1      X, Y, Z:  87.12  93.73  7.11
2.1  Line 2 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  97.62  73.07  5.24
2.1  Line 51 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  91.64  65.23  6.45
2.1  Line 113 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  85.65  55.68  8.37
2.1  Line 116 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  85.43  55.38  8.49
2.1  Line 1356 has 12 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  97.65  64.57  7.2
2.1  Line 1937 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  148.36  86.91  8.48
2.1  Line 1988 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  158.11  86.87  8.54
2.1  Line 2015 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  163.49  87.79  8.75
2.1  Line 2043 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  168.5  90.73  9.46
2.1  Line 3291 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  109.44  86.65  8.83
2.1  Line 3296 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  109.83  86.84  9.0
2.1  Line 4351 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  87.12  93.73  7.11
2.1  Line 4397 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  84.52  101.76  7.94
 
 


Number of type A irregularities = 52
Number of type B1 irregularities = 59
Number of type B2 irregularities = 0
Number of type C irregularities = 0
