# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\M8Neuron3Imaris.ims.swc.swc created with StdSwc version 1.31 on 12/11/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\M8Neuron3Imaris.ims.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  98.31  64.2  5.08
4.3  Radius of line 2 at 4.091 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  98.3  64.14  5.1
4.3  Radius of line 3 at 4.091 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  98.29  64.08  5.11
4.3  Radius of line 4 at 4.091 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  98.27  63.96  5.13
4.3  Radius of line 5 at 4.091 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  98.23  63.73  5.19
4.3  Radius of line 178 at 8.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  98.31  64.2  5.08
4.3  Radius of line 179 at 3.941 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  98.76  63.95  5.29
4.3  Radius of line 946 at 8.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  98.31  64.2  5.08
4.3  Radius of line 947 at 4.091 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  98.79  64.28  5.27
4.3  Radius of line 1538 at 8.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  98.31  64.2  5.08
4.3  Radius of line 1539 at 4.091 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  98.21  63.67  5.24
4.5  Radius of terminal line 2354 at 0.209 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  46.17  67.08  4.26
4.3  Radius of line 2619 at 8.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  98.31  64.2  5.08
4.3  Radius of line 2620 at 4.091 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  98.55  64.44  5.18
4.5  Radius of terminal line 3896 at 0.321 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  36.38  122.39  0.88
2.5  Seg length ending at pt. 2 <= 0.1 at 0.064.  (removed)
     A       X, Y, Z:  98.3  64.14  5.1
2.4  Seg length ending at pt. 179 >= 6.0 stdevs above mean at 0.556.  (no action taken)
     B1      X, Y, Z:  98.76  63.95  5.29
2.5  Seg length ending at pt. 303 <= 0.1 at 0.0458.  (removed)
     A       X, Y, Z:  100.46  45.46  6.4
2.5  Seg length ending at pt. 309 <= 0.1 at 0.0678.  (removed)
     A       X, Y, Z:  100.57  45.41  6.42
2.5  Seg length ending at pt. 738 <= 0.1 at 0.0374.  (removed)
     A       X, Y, Z:  116.93  48.84  7.92
2.5  Seg length ending at pt. 740 <= 0.1 at 0.0781.  (removed)
     A       X, Y, Z:  116.83  48.79  7.87
2.5  Seg length ending at pt. 876 <= 0.1 at 0.0735.  (removed)
     A       X, Y, Z:  107.92  36.48  6.14
2.5  Seg length ending at pt. 895 <= 0.1 at 0.04.  (removed)
     A       X, Y, Z:  108.34  34.46  6.3
2.5  Seg length ending at pt. 897 <= 0.1 at 0.0812.  (removed)
     A       X, Y, Z:  108.22  34.45  6.28
2.5  Seg length ending at pt. 905 <= 0.1 at 0.0707.  (removed)
     A       X, Y, Z:  108.26  34.49  6.24
2.4  Seg length ending at pt. 947 >= 6.0 stdevs above mean at 0.5224.  (no action taken)
     B1      X, Y, Z:  98.79  64.28  5.27
2.5  Seg length ending at pt. 1172 <= 0.1 at 0.0812.  (removed)
     A       X, Y, Z:  113.14  73.61  6.8
2.5  Seg length ending at pt. 1237 <= 0.1 at 0.049.  (removed)
     A       X, Y, Z:  118.15  78.32  7.56
2.5  Seg length ending at pt. 1239 <= 0.1 at 0.09.  (removed)
     A       X, Y, Z:  118.09  78.39  7.66
2.5  Seg length ending at pt. 1259 <= 0.1 at 0.0995.  (removed)
     A       X, Y, Z:  118.7  77.54  7.49
2.5  Seg length ending at pt. 1486 <= 0.1 at 0.08.  (removed)
     A       X, Y, Z:  142.58  92.98  3.87
2.5  Seg length ending at pt. 1538 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  98.31  64.2  5.08
2.4  Seg length ending at pt. 1539 >= 6.0 stdevs above mean at 0.5626.  (no action taken)
     B1      X, Y, Z:  98.21  63.67  5.24
2.5  Seg length ending at pt. 2071 <= 0.1 at 0.0583.  (removed)
     A       X, Y, Z:  74.67  63.79  4.86
2.5  Seg length ending at pt. 2107 <= 0.1 at 0.0995.  (removed)
     A       X, Y, Z:  72.38  67.71  5.0
2.5  Seg length ending at pt. 2202 <= 0.1 at 0.099.  (removed)
     A       X, Y, Z:  66.38  69.32  4.88
2.5  Seg length ending at pt. 2307 <= 0.1 at 0.0837.  (removed)
     A       X, Y, Z:  53.82  67.4  4.91
2.5  Seg length ending at pt. 2407 <= 0.1 at 0.03.  (removed)
     A       X, Y, Z:  54.0  66.65  8.81
2.5  Seg length ending at pt. 2409 <= 0.1 at 0.05.  (removed)
     A       X, Y, Z:  54.0  66.65  8.88
2.5  Seg length ending at pt. 2483 <= 0.1 at 0.0374.  (removed)
     A       X, Y, Z:  53.64  66.49  9.09
2.5  Seg length ending at pt. 2485 <= 0.1 at 0.0728.  (removed)
     A       X, Y, Z:  53.7  66.58  9.11
2.5  Seg length ending at pt. 2488 <= 0.1 at 0.0735.  (removed)
     A       X, Y, Z:  53.69  66.58  9.13
2.5  Seg length ending at pt. 2507 <= 0.1 at 0.0707.  (removed)
     A       X, Y, Z:  51.66  65.87  9.65
2.5  Seg length ending at pt. 2619 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  98.31  64.2  5.08
2.5  Seg length ending at pt. 2937 <= 0.1 at 0.0831.  (removed)
     A       X, Y, Z:  108.27  99.88  3.34
2.5  Seg length ending at pt. 3108 <= 0.1 at 0.0678.  (removed)
     A       X, Y, Z:  112.17  114.27  4.31
2.5  Seg length ending at pt. 3282 <= 0.1 at 0.0964.  (removed)
     A       X, Y, Z:  105.72  119.31  3.64
2.5  Seg length ending at pt. 3680 <= 0.1 at 0.0927.  (removed)
     A       X, Y, Z:  65.31  107.56  10.46
2.5  Seg length ending at pt. 739 <= 0.1 at 0.0831.  (removed)
     A       X, Y, Z:  116.89  48.82  7.91
2.5  Seg length ending at pt. 896 <= 0.1 at 0.0806.  (removed)
     A       X, Y, Z:  108.3  34.46  6.29
2.5  Seg length ending at pt. 1238 <= 0.1 at 0.0949.  (removed)
     A       X, Y, Z:  118.13  78.35  7.59
2.5  Seg length ending at pt. 2408 <= 0.1 at 0.05.  (removed)
     A       X, Y, Z:  54.0  66.65  8.83
2.5  Seg length ending at pt. 2484 <= 0.1 at 0.0748.  (removed)
     A       X, Y, Z:  53.66  66.52  9.1
2.6  Line 1 and line 178 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  98.31  64.2  5.08
2.6  Line 1 and line 946 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  98.31  64.2  5.08
2.6  Line 178 and line 946 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  98.31  64.2  5.08
2.6  Line 1241 and line 1254 have the same coordinates.  (second line removed)
     A      X, Y, Z:  118.24  78.16  7.57
2.6  Line 2433 and line 2455 have the same coordinates.  (second line removed)
     A      X, Y, Z:  53.99  66.63  8.97
2.6  Line 2434 and line 2455 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  54.05  66.65  9.09
2.6  Line 2435 and line 2456 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  54.17  66.71  9.14
2.6  Line 2437 and line 2458 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  54.43  66.82  9.16
2.6  Line 3109 and line 3116 have the same coordinates.  (second line removed)
     A      X, Y, Z:  112.15  114.32  4.29
4.4  Line 1426 of rad 0.4 links to 1425 of rad 0.192.  (no action taken)
     B1      X, Y, Z:  140.76  91.79  4.4
4.4  Line 3101 of rad 0.4 links to 3100 of rad 0.195.  (no action taken)
     B1      X, Y, Z:  111.3  113.0  3.98
4.4  Line 3679 of rad 0.287 links to 3674 of rad 0.137.  (no action taken)
     B1      X, Y, Z:  65.26  107.51  10.4
2.1  Line 1 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  98.31  64.2  5.08
2.1  Line 302 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  100.42  45.48  6.39
2.1  Line 737 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  116.96  48.86  7.93
2.1  Line 875 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  107.99  36.47  6.12
2.1  Line 894 has 4 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  108.38  34.46  6.3
2.1  Line 1171 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  113.1  73.66  6.75
2.1  Line 1236 has 4 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  118.17  78.3  7.52
2.1  Line 1485 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  142.58  92.9  3.87
2.1  Line 2070 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  74.7  63.79  4.91
2.1  Line 2406 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  54.0  66.65  8.78
2.1  Line 2482 has 4 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  53.62  66.46  9.08
2.1  Line 2506 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  51.67  65.8  9.65
2.1  Line 2936 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  108.25  99.95  3.38
2.1  Line 3107 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  112.2  114.21  4.32
2.1  Line 3679 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  65.26  107.51  10.4
 
 


Number of type A irregularities = 38
Number of type B1 irregularities = 42
Number of type B2 irregularities = 0
Number of type C irregularities = 0
