# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\M8Neuron1Imaris.ims.swc.swc created with StdSwc version 1.31 on 12/11/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\M8Neuron1Imaris.ims.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  104.02  64.59  2.98
4.3  Radius of line 2 at 2.55 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  103.88  64.11  2.77
4.3  Radius of line 3 at 0.993 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  104.1  64.12  2.74
4.3  Radius of line 4 at 0.993 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  104.33  64.13  2.71
4.3  Radius of line 63 at 0.993 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  104.28  64.08  2.72
4.5  Radius of terminal line 633 at 0.233 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  127.66  36.28  2.28
4.3  Radius of line 827 at 0.993 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  103.82  63.78  2.69
4.3  Radius of line 2102 at 1.927 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  104.02  64.59  2.98
4.3  Radius of line 2103 at 2.55 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  103.86  64.76  2.9
4.3  Radius of line 2104 at 0.993 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  103.9  64.83  2.88
4.3  Radius of line 2105 at 0.993 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  103.94  64.9  2.87
4.3  Radius of line 2106 at 0.993 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  104.03  65.04  2.85
4.3  Radius of line 2996 at 0.938 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  103.51  64.27  2.77
4.3  Radius of line 3249 at 0.938 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  104.41  64.82  2.8
4.3  Radius of line 4199 at 0.526 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  83.3  86.43  2.62
4.3  Radius of line 4388 at 0.613 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  71.12  93.33  2.11
4.3  Radius of line 4389 at 0.69 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  70.95  93.49  2.1
4.3  Radius of line 4390 at 0.648 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  70.77  93.52  2.06
4.3  Radius of line 4391 at 0.552 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  70.63  93.46  2.04
4.3  Radius of line 4398 at 0.706 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  70.78  93.65  2.08
4.3  Radius of line 4399 at 0.616 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  70.61  93.81  2.07
4.3  Radius of line 4401 at 0.557 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  70.31  94.18  2.08
4.3  Radius of line 4402 at 0.595 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  70.21  94.37  2.05
4.3  Radius of line 4564 at 0.555 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  70.26  94.12  2.11
4.3  Radius of line 4565 at 0.584 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  70.09  94.29  2.13
2.4  Seg length ending at pt. 2 >= 6.0 stdevs above mean at 0.5423.  (no action taken)
     B1      X, Y, Z:  103.88  64.11  2.77
2.5  Seg length ending at pt. 225 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  112.74  44.96  3.37
2.5  Seg length ending at pt. 267 <= 0.1 at 0.0678.  (removed)
     A       X, Y, Z:  113.41  44.1  3.23
2.5  Seg length ending at pt. 393 <= 0.1 at 0.064.  (removed)
     A       X, Y, Z:  115.48  49.06  2.85
2.5  Seg length ending at pt. 768 <= 0.1 at 0.0458.  (removed)
     A       X, Y, Z:  135.53  37.99  2.81
2.5  Seg length ending at pt. 770 <= 0.1 at 0.0831.  (removed)
     A       X, Y, Z:  135.43  37.97  2.76
2.5  Seg length ending at pt. 1037 <= 0.1 at 0.0985.  (removed)
     A       X, Y, Z:  97.05  34.33  3.79
2.5  Seg length ending at pt. 1074 <= 0.1 at 0.0316.  (removed)
     A       X, Y, Z:  94.77  29.73  4.11
2.5  Seg length ending at pt. 1076 <= 0.1 at 0.0707.  (removed)
     A       X, Y, Z:  94.66  29.72  4.13
2.5  Seg length ending at pt. 1151 <= 0.1 at 0.0995.  (removed)
     A       X, Y, Z:  96.01  26.58  3.18
2.5  Seg length ending at pt. 1168 <= 0.1 at 0.0748.  (removed)
     A       X, Y, Z:  94.42  26.32  4.13
2.5  Seg length ending at pt. 1179 <= 0.1 at 0.0768.  (removed)
     A       X, Y, Z:  94.51  25.89  4.12
2.5  Seg length ending at pt. 1211 <= 0.1 at 0.0964.  (removed)
     A       X, Y, Z:  94.51  22.32  4.04
2.5  Seg length ending at pt. 1219 <= 0.1 at 0.0781.  (removed)
     A       X, Y, Z:  94.89  21.63  4.38
2.5  Seg length ending at pt. 1340 <= 0.1 at 0.0985.  (removed)
     A       X, Y, Z:  102.81  39.78  2.77
2.5  Seg length ending at pt. 1370 <= 0.1 at 0.0608.  (removed)
     A       X, Y, Z:  103.46  36.8  3.13
2.5  Seg length ending at pt. 1450 <= 0.1 at 0.0949.  (removed)
     A       X, Y, Z:  106.38  32.83  3.11
2.5  Seg length ending at pt. 1476 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  106.83  32.62  3.02
2.5  Seg length ending at pt. 1593 <= 0.1 at 0.064.  (removed)
     A       X, Y, Z:  110.59  29.18  3.72
2.5  Seg length ending at pt. 1607 <= 0.1 at 0.0917.  (removed)
     A       X, Y, Z:  111.37  28.36  3.65
2.5  Seg length ending at pt. 1643 <= 0.1 at 0.0927.  (removed)
     A       X, Y, Z:  112.5  26.78  3.43
2.5  Seg length ending at pt. 1666 <= 0.1 at 0.0883.  (removed)
     A       X, Y, Z:  112.9  25.78  3.96
2.5  Seg length ending at pt. 1713 <= 0.1 at 0.0825.  (removed)
     A       X, Y, Z:  113.55  24.62  3.87
2.5  Seg length ending at pt. 1770 <= 0.1 at 0.0812.  (removed)
     A       X, Y, Z:  116.59  22.95  3.93
2.5  Seg length ending at pt. 1969 <= 0.1 at 0.0911.  (removed)
     A       X, Y, Z:  111.53  19.78  2.76
2.5  Seg length ending at pt. 2102 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  104.02  64.59  2.98
2.5  Seg length ending at pt. 2104 <= 0.1 at 0.0831.  (removed)
     A       X, Y, Z:  103.9  64.83  2.88
2.5  Seg length ending at pt. 2665 <= 0.1 at 0.0954.  (removed)
     A       X, Y, Z:  112.77  102.11  1.77
2.5  Seg length ending at pt. 2841 <= 0.1 at 0.0735.  (removed)
     A       X, Y, Z:  119.95  101.58  1.0
2.4  Seg length ending at pt. 2996 >= 6.0 stdevs above mean at 0.7693.  (no action taken)
     B1      X, Y, Z:  103.51  64.27  2.77
2.5  Seg length ending at pt. 3102 <= 0.1 at 0.099.  (removed)
     A       X, Y, Z:  95.54  48.42  3.32
2.4  Seg length ending at pt. 3249 >= 6.0 stdevs above mean at 0.5622.  (no action taken)
     B1      X, Y, Z:  104.41  64.82  2.8
2.5  Seg length ending at pt. 3403 <= 0.1 at 0.064.  (removed)
     A       X, Y, Z:  124.0  64.71  3.08
2.5  Seg length ending at pt. 3444 <= 0.1 at 0.0831.  (removed)
     A       X, Y, Z:  126.29  65.2  3.12
2.5  Seg length ending at pt. 3484 <= 0.1 at 0.0922.  (removed)
     A       X, Y, Z:  129.36  66.69  3.18
2.5  Seg length ending at pt. 3514 <= 0.1 at 0.0768.  (removed)
     A       X, Y, Z:  130.49  67.45  3.2
2.5  Seg length ending at pt. 4023 <= 0.1 at 0.0671.  (removed)
     A       X, Y, Z:  91.58  81.23  3.0
2.5  Seg length ending at pt. 4046 <= 0.1 at 0.0245.  (removed)
     A       X, Y, Z:  91.42  81.35  3.09
2.5  Seg length ending at pt. 4048 <= 0.1 at 0.05.  (removed)
     A       X, Y, Z:  91.42  81.39  3.14
2.5  Seg length ending at pt. 4075 <= 0.1 at 0.1.  (removed)
     A       X, Y, Z:  91.42  81.44  3.16
2.5  Seg length ending at pt. 4141 <= 0.1 at 0.0877.  (removed)
     A       X, Y, Z:  88.71  83.19  2.69
2.5  Seg length ending at pt. 4231 <= 0.1 at 0.064.  (removed)
     A       X, Y, Z:  80.34  87.07  2.21
2.5  Seg length ending at pt. 4253 <= 0.1 at 0.0837.  (removed)
     A       X, Y, Z:  78.7  87.98  2.29
2.5  Seg length ending at pt. 4283 <= 0.1 at 0.099.  (removed)
     A       X, Y, Z:  77.68  88.23  2.27
2.5  Seg length ending at pt. 4285 <= 0.1 at 0.0707.  (removed)
     A       X, Y, Z:  77.54  88.23  2.28
2.5  Seg length ending at pt. 4287 <= 0.1 at 0.051.  (removed)
     A       X, Y, Z:  77.49  88.23  2.35
2.5  Seg length ending at pt. 4293 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  76.9  88.57  2.28
2.5  Seg length ending at pt. 4314 <= 0.1 at 0.0883.  (removed)
     A       X, Y, Z:  75.84  89.49  2.13
2.5  Seg length ending at pt. 4465 <= 0.1 at 0.0911.  (removed)
     A       X, Y, Z:  66.6  98.86  1.95
2.5  Seg length ending at pt. 4587 <= 0.1 at 0.0616.  (removed)
     A       X, Y, Z:  68.81  95.12  2.27
2.5  Seg length ending at pt. 5110 <= 0.1 at 0.0583.  (removed)
     A       X, Y, Z:  65.6  96.37  2.12
2.5  Seg length ending at pt. 5134 <= 0.1 at 0.0412.  (removed)
     A       X, Y, Z:  84.06  85.88  2.5
2.5  Seg length ending at pt. 5153 <= 0.1 at 0.0316.  (removed)
     A       X, Y, Z:  84.28  85.71  2.47
2.5  Seg length ending at pt. 769 <= 0.1 at 0.0768.  (removed)
     A       X, Y, Z:  135.5  37.99  2.8
2.5  Seg length ending at pt. 1075 <= 0.1 at 0.0735.  (removed)
     A       X, Y, Z:  94.73  29.72  4.12
2.5  Seg length ending at pt. 4047 <= 0.1 at 0.0374.  (removed)
     A       X, Y, Z:  91.42  81.36  3.1
2.5  Seg length ending at pt. 5154 <= 0.1 at 0.0812.  (removed)
     A       X, Y, Z:  84.24  85.74  2.48
2.6  Line 4029 and line 4093 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  91.45  81.51  3.5
4.4  Line 113 of rad 0.4 links to 112 of rad 0.187.  (no action taken)
     B1      X, Y, Z:  109.33  53.97  2.37
4.4  Line 575 of rad 0.4 links to 574 of rad 0.189.  (no action taken)
     B1      X, Y, Z:  120.73  44.45  2.4
4.4  Line 870 of rad 0.4 links to 869 of rad 0.187.  (no action taken)
     B1      X, Y, Z:  103.56  54.25  2.66
4.4  Line 1449 of rad 0.4 links to 1443 of rad 0.144.  (no action taken)
     B1      X, Y, Z:  106.31  32.78  3.07
4.4  Line 2168 of rad 0.4 links to 2167 of rad 0.187.  (no action taken)
     B1      X, Y, Z:  113.26  75.53  1.72
4.4  Line 2622 of rad 0.4 links to 2621 of rad 0.187.  (no action taken)
     B1      X, Y, Z:  117.13  97.15  0.85
4.4  Line 3762 of rad 0.4 links to 3761 of rad 0.187.  (no action taken)
     B1      X, Y, Z:  99.55  69.19  2.85
2.1  Line 224 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  112.72  44.98  3.28
2.1  Line 266 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  113.38  44.11  3.29
2.1  Line 392 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  115.44  49.1  2.82
2.1  Line 767 has 4 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  135.57  38.0  2.83
2.1  Line 1073 has 4 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  94.8  29.73  4.1
2.1  Line 1167 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  94.48  26.36  4.15
2.1  Line 1178 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  94.44  25.9  4.15
2.1  Line 1369 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  103.46  36.79  3.19
2.1  Line 1449 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  106.31  32.78  3.07
2.1  Line 1592 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  110.56  29.14  3.76
2.1  Line 1606 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  111.35  28.32  3.73
2.1  Line 1665 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  112.85  25.8  3.89
2.1  Line 1712 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  113.53  24.62  3.95
2.1  Line 1769 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  116.6  22.96  4.01
2.1  Line 1968 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  111.46  19.73  2.79
2.1  Line 2103 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  103.86  64.76  2.9
2.1  Line 2664 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  112.68  102.12  1.74
2.1  Line 2840 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  120.01  101.61  0.97
2.1  Line 3101 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  95.47  48.49  3.32
2.1  Line 3402 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  124.01  64.65  3.1
2.1  Line 3483 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  129.34  66.78  3.18
2.1  Line 3513 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  130.44  67.48  3.25
2.1  Line 4022 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  91.6  81.19  3.05
2.1  Line 4045 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  91.43  81.34  3.07
2.1  Line 4230 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  80.33  87.05  2.15
2.1  Line 4252 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  78.65  87.92  2.26
2.1  Line 4292 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  76.93  88.65  2.24
2.1  Line 4313 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  75.79  89.47  2.2
2.1  Line 4586 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  68.78  95.07  2.29
2.1  Line 5152 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  84.31  85.7  2.47
 
 


Number of type A irregularities = 54
Number of type B1 irregularities = 66
Number of type B2 irregularities = 0
Number of type C irregularities = 0
