# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\M7Neuron3Imaris.ims.swc.swc created with StdSwc version 1.31 on 12/11/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\M7Neuron3Imaris.ims.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  56.28  57.26  5.32
4.3  Radius of line 2 at 2.55 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  56.34  57.54  5.17
4.3  Radius of line 3 at 0.993 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  56.44  57.83  5.07
4.3  Radius of line 70 at 0.4 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  67.21  69.2  4.95
4.3  Radius of line 90 at 0.4 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  70.9  72.15  5.05
4.3  Radius of line 104 at 0.4 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  72.75  74.8  5.44
4.3  Radius of line 194 at 0.4 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  86.53  90.38  4.57
4.3  Radius of line 215 at 0.4 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  88.81  94.58  4.86
4.3  Radius of line 338 at 0.4 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  104.86  117.31  6.79
4.3  Radius of line 480 at 0.4 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  117.42  143.27  7.43
4.3  Radius of line 481 at 0.398 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  117.5  143.49  7.46
4.3  Radius of line 482 at 0.446 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  117.59  143.7  7.5
4.3  Radius of line 483 at 0.517 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  117.7  143.92  7.54
4.3  Radius of line 484 at 0.557 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  117.82  144.13  7.59
4.3  Radius of line 485 at 0.545 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  117.96  144.33  7.63
4.3  Radius of line 486 at 0.469 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  118.12  144.53  7.67
4.3  Radius of line 623 at 0.399 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  144.16  155.59  8.83
4.3  Radius of line 624 at 0.415 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  144.3  155.79  8.84
4.3  Radius of line 625 at 0.425 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  144.45  155.97  8.84
4.3  Radius of line 626 at 0.398 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  144.65  156.1  8.85
4.3  Radius of line 773 at 0.4 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  174.89  163.0  10.09
4.5  Radius of terminal line 780 at 0.388 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  176.15  163.6  9.64
4.3  Radius of line 1423 at 0.421 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  117.48  143.81  7.55
4.3  Radius of line 1424 at 0.486 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  117.53  144.0  7.6
4.3  Radius of line 1425 at 0.541 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  117.57  144.2  7.64
4.3  Radius of line 1426 at 0.58 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  117.63  144.4  7.68
4.3  Radius of line 1427 at 0.565 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  117.71  144.6  7.73
4.3  Radius of line 1428 at 0.483 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  117.74  144.64  7.74
4.3  Radius of line 1429 at 0.483 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  117.76  144.69  7.75
4.3  Radius of line 1430 at 0.483 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  117.82  144.78  7.78
4.3  Radius of line 1432 at 0.387 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  117.87  144.91  7.81
4.3  Radius of line 1433 at 0.387 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  117.78  144.88  7.8
4.3  Radius of line 1480 at 0.431 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  120.39  149.3  9.05
4.3  Radius of line 1481 at 0.472 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  120.49  149.49  9.08
4.3  Radius of line 1482 at 0.449 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  120.55  149.59  9.09
4.3  Radius of line 1483 at 0.449 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  120.61  149.68  9.1
4.5  Radius of terminal line 1485 at 0.227 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  120.87  150.05  9.06
4.3  Radius of line 1580 at 0.435 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  117.55  144.69  7.77
4.3  Radius of line 1600 at 0.476 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  117.6  144.67  7.75
4.3  Radius of line 1614 at 0.451 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  117.57  144.68  7.77
4.3  Radius of line 1626 at 0.453 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  117.52  144.54  7.7
4.3  Radius of line 4000 at 0.938 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  55.76  57.13  5.09
4.3  Radius of line 4001 at 0.388 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  55.57  57.01  5.07
4.3  Radius of line 4002 at 0.388 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  55.39  56.89  5.05
4.3  Radius of line 4012 at 0.4 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  53.61  55.23  5.05
4.3  Radius of line 4049 at 0.4 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  48.54  49.02  3.6
4.3  Radius of line 4347 at 0.388 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  55.71  57.32  5.09
4.3  Radius of line 4356 at 0.4 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  53.64  56.97  5.22
4.3  Radius of line 4358 at 0.4 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  53.16  56.87  5.24
4.3  Radius of line 4667 at 0.4 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  44.53  52.14  4.84
4.3  Radius of line 5027 at 0.388 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  55.91  56.75  5.03
4.3  Radius of line 5030 at 0.4 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  55.9  55.89  4.95
2.5  Seg length ending at pt. 402 <= 0.1 at 0.0583.  (removed)
     A       X, Y, Z:  112.86  128.5  6.91
2.5  Seg length ending at pt. 405 <= 0.1 at 0.0583.  (removed)
     A       X, Y, Z:  112.99  128.68  6.91
2.5  Seg length ending at pt. 466 <= 0.1 at 0.0332.  (removed)
     A       X, Y, Z:  116.51  141.0  7.1
2.5  Seg length ending at pt. 468 <= 0.1 at 0.0548.  (removed)
     A       X, Y, Z:  116.54  141.08  7.11
2.5  Seg length ending at pt. 680 <= 0.1 at 0.02.  (removed)
     A       X, Y, Z:  155.67  159.15  9.22
2.5  Seg length ending at pt. 682 <= 0.1 at 0.0608.  (removed)
     A       X, Y, Z:  155.76  159.16  9.23
2.5  Seg length ending at pt. 759 <= 0.1 at 0.0616.  (removed)
     A       X, Y, Z:  172.05  162.19  9.68
2.5  Seg length ending at pt. 891 <= 0.1 at 0.086.  (removed)
     A       X, Y, Z:  163.81  161.01  9.39
2.5  Seg length ending at pt. 1081 <= 0.1 at 0.0985.  (removed)
     A       X, Y, Z:  149.13  156.93  8.83
2.5  Seg length ending at pt. 1090 <= 0.1 at 0.0954.  (removed)
     A       X, Y, Z:  149.09  156.92  8.93
2.5  Seg length ending at pt. 1111 <= 0.1 at 0.0735.  (removed)
     A       X, Y, Z:  145.6  156.37  8.8
2.5  Seg length ending at pt. 1113 <= 0.1 at 0.0825.  (removed)
     A       X, Y, Z:  145.74  156.4  8.76
2.5  Seg length ending at pt. 1309 <= 0.1 at 0.0787.  (removed)
     A       X, Y, Z:  128.87  149.43  7.98
2.5  Seg length ending at pt. 1372 <= 0.1 at 0.097.  (removed)
     A       X, Y, Z:  121.37  147.19  7.76
2.5  Seg length ending at pt. 1374 <= 0.1 at 0.0927.  (removed)
     A       X, Y, Z:  121.37  147.07  7.62
2.5  Seg length ending at pt. 1428 <= 0.1 at 0.051.  (removed)
     A       X, Y, Z:  117.74  144.64  7.74
2.5  Seg length ending at pt. 1432 <= 0.1 at 0.0927.  (removed)
     A       X, Y, Z:  117.87  144.91  7.81
2.5  Seg length ending at pt. 1838 <= 0.1 at 0.0866.  (removed)
     A       X, Y, Z:  114.34  131.27  6.76
2.5  Seg length ending at pt. 2178 <= 0.1 at 0.097.  (removed)
     A       X, Y, Z:  106.49  117.77  6.96
2.5  Seg length ending at pt. 2227 <= 0.1 at 0.0548.  (removed)
     A       X, Y, Z:  115.3  122.36  7.38
2.5  Seg length ending at pt. 2285 <= 0.1 at 0.099.  (removed)
     A       X, Y, Z:  126.57  122.38  6.57
2.5  Seg length ending at pt. 2301 <= 0.1 at 0.0616.  (removed)
     A       X, Y, Z:  128.82  124.06  7.23
2.5  Seg length ending at pt. 2486 <= 0.1 at 0.0224.  (removed)
     A       X, Y, Z:  128.51  123.67  7.12
2.5  Seg length ending at pt. 2488 <= 0.1 at 0.0424.  (removed)
     A       X, Y, Z:  128.52  123.6  7.12
2.5  Seg length ending at pt. 2490 <= 0.1 at 0.07.  (removed)
     A       X, Y, Z:  128.55  123.49  7.17
2.5  Seg length ending at pt. 2945 <= 0.1 at 0.0995.  (removed)
     A       X, Y, Z:  102.89  110.61  7.28
2.5  Seg length ending at pt. 3320 <= 0.1 at 0.099.  (removed)
     A       X, Y, Z:  87.26  97.04  6.88
2.5  Seg length ending at pt. 3334 <= 0.1 at 0.0592.  (removed)
     A       X, Y, Z:  85.93  99.14  7.78
2.4  Seg length ending at pt. 4000 >= 6.0 stdevs above mean at 0.7148.  (no action taken)
     B1      X, Y, Z:  55.76  57.13  5.09
2.5  Seg length ending at pt. 4526 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  24.03  68.74  4.83
2.5  Seg length ending at pt. 4739 <= 0.1 at 0.01.  (removed)
     A       X, Y, Z:  30.75  44.15  5.5
2.5  Seg length ending at pt. 4741 <= 0.1 at 0.0141.  (removed)
     A       X, Y, Z:  30.73  44.14  5.5
2.5  Seg length ending at pt. 4743 <= 0.1 at 0.0566.  (removed)
     A       X, Y, Z:  30.66  44.08  5.5
2.5  Seg length ending at pt. 5134 <= 0.1 at 0.03.  (removed)
     A       X, Y, Z:  65.0  38.46  8.75
2.5  Seg length ending at pt. 5136 <= 0.1 at 0.0616.  (removed)
     A       X, Y, Z:  65.08  38.41  8.72
2.5  Seg length ending at pt. 5138 <= 0.1 at 0.0678.  (removed)
     A       X, Y, Z:  65.24  38.31  8.67
2.5  Seg length ending at pt. 467 <= 0.1 at 0.064.  (removed)
     A       X, Y, Z:  116.52  141.03  7.1
2.5  Seg length ending at pt. 681 <= 0.1 at 0.051.  (removed)
     A       X, Y, Z:  155.7  159.16  9.22
2.5  Seg length ending at pt. 2487 <= 0.1 at 0.0361.  (removed)
     A       X, Y, Z:  128.51  123.64  7.13
2.5  Seg length ending at pt. 4740 <= 0.1 at 0.0141.  (removed)
     A       X, Y, Z:  30.74  44.15  5.5
2.5  Seg length ending at pt. 5135 <= 0.1 at 0.0671.  (removed)
     A       X, Y, Z:  65.03  38.44  8.74
2.5  Seg length ending at pt. 4742 <= 0.1 at 0.064.  (removed)
     A       X, Y, Z:  30.7  44.12  5.5
2.6  Line 2736 and line 2751 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  110.94  119.67  7.77
2.6  Line 4822 and line 4899 have the same coordinates.  (second line removed)
     A      X, Y, Z:  30.68  44.13  5.68
2.6  Line 4883 and line 4913 have the same coordinates.  (second line removed)
     A      X, Y, Z:  30.68  44.13  5.67
2.6  Line 4884 and line 4913 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  30.65  44.12  5.81
2.6  Line 4953 and line 4975 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  32.51  45.62  5.61
2.6  Line 4954 and line 4976 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  32.52  45.56  5.78
2.6  Line 5267 and line 5278 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  65.37  38.07  8.54
2.6  Line 5344 and line 5359 have the same coordinates.  (second line removed)
     A      X, Y, Z:  64.98  38.36  8.64
4.4  Line 2 of rad 2.55 links to 1 of rad 0.125.  (no action taken)
     B1      X, Y, Z:  56.34  57.54  5.17
4.4  Line 70 of rad 0.4 links to 69 of rad 0.187.  (no action taken)
     B1      X, Y, Z:  67.21  69.2  4.95
4.4  Line 90 of rad 0.4 links to 89 of rad 0.187.  (no action taken)
     B1      X, Y, Z:  70.9  72.15  5.05
4.4  Line 104 of rad 0.4 links to 103 of rad 0.187.  (no action taken)
     B1      X, Y, Z:  72.75  74.8  5.44
4.4  Line 194 of rad 0.4 links to 193 of rad 0.187.  (no action taken)
     B1      X, Y, Z:  86.53  90.38  4.57
4.4  Line 215 of rad 0.4 links to 214 of rad 0.187.  (no action taken)
     B1      X, Y, Z:  88.81  94.58  4.86
4.4  Line 338 of rad 0.4 links to 337 of rad 0.187.  (no action taken)
     B1      X, Y, Z:  104.86  117.31  6.79
4.4  Line 480 of rad 0.4 links to 479 of rad 0.187.  (no action taken)
     B1      X, Y, Z:  117.42  143.27  7.43
4.4  Line 4012 of rad 0.4 links to 4011 of rad 0.187.  (no action taken)
     B1      X, Y, Z:  53.61  55.23  5.05
4.4  Line 4049 of rad 0.4 links to 4048 of rad 0.187.  (no action taken)
     B1      X, Y, Z:  48.54  49.02  3.6
4.4  Line 4356 of rad 0.4 links to 4355 of rad 0.187.  (no action taken)
     B1      X, Y, Z:  53.64  56.97  5.22
4.4  Line 4667 of rad 0.4 links to 4666 of rad 0.187.  (no action taken)
     B1      X, Y, Z:  44.53  52.14  4.84
4.4  Line 5030 of rad 0.4 links to 5029 of rad 0.187.  (no action taken)
     B1      X, Y, Z:  55.9  55.89  4.95
2.1  Line 401 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  112.83  128.45  6.91
2.1  Line 404 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  112.96  128.63  6.91
2.1  Line 465 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  116.5  140.97  7.09
2.1  Line 679 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  155.65  159.15  9.22
2.1  Line 758 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  171.99  162.18  9.67
2.1  Line 1427 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  117.71  144.6  7.73
2.1  Line 1431 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  117.96  144.93  7.82
2.1  Line 2177 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  106.4  117.74  6.94
2.1  Line 2226 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  115.25  122.37  7.4
2.1  Line 2284 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  126.49  122.33  6.54
2.1  Line 2300 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  128.79  124.01  7.21
2.1  Line 3319 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  87.27  96.95  6.84
2.1  Line 3333 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  85.96  99.09  7.77
2.1  Line 4738 has 7 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  30.75  44.16  5.5
2.1  Line 5133 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  64.98  38.48  8.76
2.1  Line 5137 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  65.18  38.34  8.68
 
 


Number of type A irregularities = 44
Number of type B1 irregularities = 87
Number of type B2 irregularities = 0
Number of type C irregularities = 0
