# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\M6Neuron1Imaris.ims.swc.swc created with StdSwc version 1.31 on 12/11/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\M6Neuron1Imaris.ims.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  97.46  99.82  11.11
4.3  Radius of line 2 at 3.689 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  97.27  99.57  11.08
4.3  Radius of line 3 at 3.689 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  97.09  99.32  11.06
4.3  Radius of line 4 at 1.102 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  96.81  99.04  11.09
4.3  Radius of line 606 at 8.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  97.46  99.82  11.11
4.3  Radius of line 607 at 2.3 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  97.55  100.36  11.12
4.3  Radius of line 608 at 1.106 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  97.29  100.53  11.1
4.3  Radius of line 680 at 1.106 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  97.43  100.7  11.15
4.3  Radius of line 2033 at 8.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  97.46  99.82  11.11
4.3  Radius of line 2034 at 2.3 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  97.69  99.86  11.06
4.3  Radius of line 2035 at 1.196 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  97.82  99.89  11.04
4.3  Radius of line 2036 at 1.196 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  97.95  99.92  11.03
4.5  Radius of terminal line 5228 at 0.365 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  134.89  99.23  15.83
4.3  Radius of line 6904 at 1.111 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  98.01  99.46  10.85
4.3  Radius of line 7082 at 1.106 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  97.91  99.41  10.88
2.5  Seg length ending at pt. 138 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  88.86  95.89  17.13
2.5  Seg length ending at pt. 140 <= 0.1 at 0.0141.  (removed)
     A       X, Y, Z:  88.85  95.9  17.13
2.5  Seg length ending at pt. 142 <= 0.1 at 0.03.  (removed)
     A       X, Y, Z:  88.83  95.92  17.11
2.5  Seg length ending at pt. 378 <= 0.1 at 0.0787.  (removed)
     A       X, Y, Z:  78.54  96.61  19.35
2.5  Seg length ending at pt. 454 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  71.02  93.77  18.14
2.5  Seg length ending at pt. 500 <= 0.1 at 0.0374.  (removed)
     A       X, Y, Z:  67.92  92.52  18.73
2.5  Seg length ending at pt. 502 <= 0.1 at 0.0735.  (removed)
     A       X, Y, Z:  67.87  92.61  18.78
2.5  Seg length ending at pt. 541 <= 0.1 at 0.0173.  (removed)
     A       X, Y, Z:  66.27  91.49  18.63
2.5  Seg length ending at pt. 543 <= 0.1 at 0.0424.  (removed)
     A       X, Y, Z:  66.22  91.54  18.63
2.5  Seg length ending at pt. 582 <= 0.1 at 0.0964.  (removed)
     A       X, Y, Z:  66.06  91.34  18.51
2.5  Seg length ending at pt. 750 <= 0.1 at 0.0735.  (removed)
     A       X, Y, Z:  90.88  105.35  13.37
2.5  Seg length ending at pt. 755 <= 0.1 at 0.0721.  (removed)
     A       X, Y, Z:  90.87  105.27  13.31
2.5  Seg length ending at pt. 1020 <= 0.1 at 0.0964.  (removed)
     A       X, Y, Z:  70.02  124.94  15.38
2.5  Seg length ending at pt. 1152 <= 0.1 at 0.0927.  (removed)
     A       X, Y, Z:  57.83  131.78  16.88
2.5  Seg length ending at pt. 1284 <= 0.1 at 0.0436.  (removed)
     A       X, Y, Z:  52.26  134.15  16.75
2.5  Seg length ending at pt. 1286 <= 0.1 at 0.0883.  (removed)
     A       X, Y, Z:  52.19  134.11  16.64
2.5  Seg length ending at pt. 1314 <= 0.1 at 0.07.  (removed)
     A       X, Y, Z:  51.88  134.35  16.7
2.5  Seg length ending at pt. 1369 <= 0.1 at 0.0866.  (removed)
     A       X, Y, Z:  50.4  135.97  16.66
2.5  Seg length ending at pt. 1410 <= 0.1 at 0.0748.  (removed)
     A       X, Y, Z:  50.14  136.56  16.55
2.5  Seg length ending at pt. 1423 <= 0.1 at 0.0938.  (removed)
     A       X, Y, Z:  50.21  136.72  16.67
2.5  Seg length ending at pt. 1473 <= 0.1 at 0.0592.  (removed)
     A       X, Y, Z:  48.7  139.52  17.09
2.5  Seg length ending at pt. 1607 <= 0.1 at 0.0539.  (removed)
     A       X, Y, Z:  48.12  140.21  17.25
2.5  Seg length ending at pt. 1681 <= 0.1 at 0.0592.  (removed)
     A       X, Y, Z:  60.5  131.18  16.48
2.5  Seg length ending at pt. 2033 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  97.46  99.82  11.11
2.5  Seg length ending at pt. 2299 <= 0.1 at 0.0447.  (removed)
     A       X, Y, Z:  119.43  111.19  14.4
2.5  Seg length ending at pt. 2301 <= 0.1 at 0.0866.  (removed)
     A       X, Y, Z:  119.44  111.3  14.32
2.5  Seg length ending at pt. 3132 <= 0.1 at 0.0831.  (removed)
     A       X, Y, Z:  108.45  100.25  16.55
2.5  Seg length ending at pt. 3242 <= 0.1 at 0.0707.  (removed)
     A       X, Y, Z:  115.33  97.28  18.12
2.5  Seg length ending at pt. 3256 <= 0.1 at 0.064.  (removed)
     A       X, Y, Z:  115.57  97.17  17.96
2.5  Seg length ending at pt. 3336 <= 0.1 at 0.0141.  (removed)
     A       X, Y, Z:  119.61  99.54  13.68
2.5  Seg length ending at pt. 3338 <= 0.1 at 0.0447.  (removed)
     A       X, Y, Z:  119.67  99.53  13.66
2.5  Seg length ending at pt. 4650 <= 0.1 at 0.086.  (removed)
     A       X, Y, Z:  119.12  62.94  12.73
2.5  Seg length ending at pt. 4747 <= 0.1 at 0.0787.  (removed)
     A       X, Y, Z:  118.55  57.65  12.92
2.5  Seg length ending at pt. 4955 <= 0.1 at 0.0735.  (removed)
     A       X, Y, Z:  127.36  91.88  12.62
2.5  Seg length ending at pt. 5035 <= 0.1 at 0.0735.  (removed)
     A       X, Y, Z:  137.08  96.2  15.97
2.4  Seg length ending at pt. 5734 >= 6.0 stdevs above mean at 0.7856.  (no action taken)
     B1      X, Y, Z:  148.25  116.18  15.13
2.4  Seg length ending at pt. 5735 >= 6.0 stdevs above mean at 0.7861.  (no action taken)
     B1      X, Y, Z:  147.88  116.81  14.84
2.4  Seg length ending at pt. 5736 >= 6.0 stdevs above mean at 0.7946.  (no action taken)
     B1      X, Y, Z:  147.56  117.5  14.61
2.5  Seg length ending at pt. 5738 <= 0.1 at 0.0412.  (removed)
     A       X, Y, Z:  148.87  115.61  15.29
2.5  Seg length ending at pt. 5740 <= 0.1 at 0.0949.  (removed)
     A       X, Y, Z:  148.79  115.72  15.23
2.5  Seg length ending at pt. 5758 <= 0.1 at 0.098.  (removed)
     A       X, Y, Z:  148.88  115.8  15.22
2.5  Seg length ending at pt. 5800 <= 0.1 at 0.0224.  (removed)
     A       X, Y, Z:  152.04  115.63  15.06
2.5  Seg length ending at pt. 5802 <= 0.1 at 0.0424.  (removed)
     A       X, Y, Z:  152.04  115.58  15.1
2.5  Seg length ending at pt. 5988 <= 0.1 at 0.05.  (removed)
     A       X, Y, Z:  155.61  108.42  18.49
2.5  Seg length ending at pt. 6131 <= 0.1 at 0.0592.  (removed)
     A       X, Y, Z:  159.68  114.79  17.26
2.5  Seg length ending at pt. 6133 <= 0.1 at 0.0608.  (removed)
     A       X, Y, Z:  159.78  114.75  17.26
2.5  Seg length ending at pt. 6135 <= 0.1 at 0.0877.  (removed)
     A       X, Y, Z:  159.85  114.77  17.4
2.5  Seg length ending at pt. 6157 <= 0.1 at 0.0922.  (removed)
     A       X, Y, Z:  160.75  115.53  17.11
2.5  Seg length ending at pt. 6252 <= 0.1 at 0.0424.  (removed)
     A       X, Y, Z:  163.29  118.29  15.31
2.5  Seg length ending at pt. 6254 <= 0.1 at 0.097.  (removed)
     A       X, Y, Z:  163.32  118.34  15.45
2.5  Seg length ending at pt. 6282 <= 0.1 at 0.051.  (removed)
     A       X, Y, Z:  163.82  118.66  14.88
2.5  Seg length ending at pt. 6284 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  163.93  118.76  14.85
2.4  Seg length ending at pt. 6310 >= 6.0 stdevs above mean at 0.8008.  (no action taken)
     B1      X, Y, Z:  164.08  119.3  15.21
2.4  Seg length ending at pt. 6311 >= 6.0 stdevs above mean at 0.7772.  (no action taken)
     B1      X, Y, Z:  164.31  119.96  15.55
2.4  Seg length ending at pt. 6312 >= 6.0 stdevs above mean at 0.7889.  (no action taken)
     B1      X, Y, Z:  164.47  120.68  15.83
2.4  Seg length ending at pt. 6313 >= 6.0 stdevs above mean at 0.8019.  (no action taken)
     B1      X, Y, Z:  164.58  121.46  15.98
2.5  Seg length ending at pt. 6389 <= 0.1 at 0.099.  (removed)
     A       X, Y, Z:  176.75  119.43  10.43
2.5  Seg length ending at pt. 6526 <= 0.1 at 0.0906.  (removed)
     A       X, Y, Z:  191.6  135.85  9.45
2.5  Seg length ending at pt. 6803 <= 0.1 at 0.097.  (removed)
     A       X, Y, Z:  223.28  150.54  11.13
2.5  Seg length ending at pt. 7155 <= 0.1 at 0.0949.  (removed)
     A       X, Y, Z:  94.54  88.95  13.63
2.5  Seg length ending at pt. 7184 <= 0.1 at 0.0806.  (removed)
     A       X, Y, Z:  94.43  88.56  13.61
2.5  Seg length ending at pt. 7278 <= 0.1 at 0.0424.  (removed)
     A       X, Y, Z:  89.21  82.4  15.3
2.5  Seg length ending at pt. 7280 <= 0.1 at 0.086.  (removed)
     A       X, Y, Z:  89.21  82.47  15.4
2.5  Seg length ending at pt. 7390 <= 0.1 at 0.05.  (removed)
     A       X, Y, Z:  82.88  73.02  15.66
2.5  Seg length ending at pt. 139 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  88.86  95.89  17.13
2.5  Seg length ending at pt. 143 <= 0.1 at 0.0837.  (removed)
     A       X, Y, Z:  88.79  95.95  17.09
2.5  Seg length ending at pt. 501 <= 0.1 at 0.0781.  (removed)
     A       X, Y, Z:  67.9  92.55  18.75
2.5  Seg length ending at pt. 542 <= 0.1 at 0.0436.  (removed)
     A       X, Y, Z:  66.25  91.51  18.63
2.5  Seg length ending at pt. 1285 <= 0.1 at 0.0911.  (removed)
     A       X, Y, Z:  52.24  134.13  16.71
2.5  Seg length ending at pt. 2300 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  119.43  111.23  14.37
2.5  Seg length ending at pt. 3337 <= 0.1 at 0.0332.  (removed)
     A       X, Y, Z:  119.63  99.53  13.68
2.5  Seg length ending at pt. 5739 <= 0.1 at 0.0949.  (removed)
     A       X, Y, Z:  148.84  115.65  15.27
2.5  Seg length ending at pt. 5801 <= 0.1 at 0.0424.  (removed)
     A       X, Y, Z:  152.04  115.61  15.07
2.5  Seg length ending at pt. 5989 <= 0.1 at 0.099.  (removed)
     A       X, Y, Z:  155.64  108.38  18.49
2.5  Seg length ending at pt. 6253 <= 0.1 at 0.097.  (removed)
     A       X, Y, Z:  163.3  118.31  15.36
2.5  Seg length ending at pt. 7279 <= 0.1 at 0.0781.  (removed)
     A       X, Y, Z:  89.21  82.42  15.33
2.5  Seg length ending at pt. 7391 <= 0.1 at 0.0735.  (removed)
     A       X, Y, Z:  82.85  72.97  15.71
2.5  Seg length ending at pt. 141 <= 0.1 at 0.0173.  (removed)
     A       X, Y, Z:  88.85  95.9  17.12
2.6  Line 1 and line 606 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  97.46  99.82  11.11
2.6  Line 588 and line 594 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  65.92  91.55  18.58
2.6  Line 5813 and line 5830 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  152.11  115.21  15.5
2.6  Line 6805 and line 6823 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  223.48  150.43  10.9
4.4  Line 606 of rad 8.0 links to 2 of rad 3.689.  (no action taken)
     B1      X, Y, Z:  97.46  99.82  11.11
2.1  Line 137 has 8 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  88.86  95.89  17.13
2.1  Line 377 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  78.53  96.55  19.4
2.1  Line 453 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  71.05  93.73  18.06
2.1  Line 499 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  67.93  92.49  18.71
2.1  Line 540 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  66.28  91.48  18.62
2.1  Line 581 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  66.11  91.26  18.49
2.1  Line 749 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  90.93  105.37  13.42
2.1  Line 1019 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  70.0  124.86  15.33
2.1  Line 1151 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  57.81  131.87  16.87
2.1  Line 1283 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  52.29  134.16  16.78
2.1  Line 1313 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  51.9  134.38  16.76
2.1  Line 1368 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  50.47  136.02  16.67
2.1  Line 1422 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  50.15  136.66  16.63
2.1  Line 1472 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  48.73  139.47  17.08
2.1  Line 1606 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  48.07  140.21  17.23
2.1  Line 2298 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  119.43  111.15  14.42
2.1  Line 3131 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  108.44  100.17  16.53
2.1  Line 3241 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  115.3  97.24  18.07
2.1  Line 3255 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  115.56  97.15  17.9
2.1  Line 3335 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  119.6  99.54  13.69
2.1  Line 4746 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  118.56  57.71  12.87
2.1  Line 5034 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  137.03  96.25  15.95
2.1  Line 5737 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  148.89  115.58  15.31
2.1  Line 5799 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  152.04  115.64  15.04
2.1  Line 5987 has 4 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  155.57  108.45  18.49
2.1  Line 6130 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  159.65  114.84  17.27
2.1  Line 6251 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  163.28  118.28  15.27
2.1  Line 6281 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  163.78  118.63  14.89
2.1  Line 6283 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  163.86  118.7  14.87
2.1  Line 6388 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  176.8  119.51  10.46
2.1  Line 6802 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  223.22  150.57  11.2
2.1  Line 7154 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  94.5  89.02  13.58
2.1  Line 7183 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  94.37  88.58  13.56
2.1  Line 7277 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  89.21  82.37  15.27
 
 


Number of type A irregularities = 71
Number of type B1 irregularities = 61
Number of type B2 irregularities = 0
Number of type C irregularities = 0
