# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\M5Neuron1Imaris.ims.swc.swc created with StdSwc version 1.31 on 12/11/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\M5Neuron1Imaris.ims.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  75.65  74.02  6.95
4.3  Radius of line 2 at 2.55 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  75.2  74.12  6.86
4.3  Radius of line 3 at 0.993 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  75.17  73.95  6.83
4.3  Radius of line 4 at 0.993 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  75.13  73.79  6.8
4.3  Radius of line 155 at 0.938 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  75.12  74.31  6.84
4.3  Radius of line 426 at 0.993 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  74.88  74.09  6.82
4.3  Radius of line 1646 at 1.927 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  75.65  74.02  6.95
4.3  Radius of line 1647 at 2.55 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  75.99  73.94  6.87
4.3  Radius of line 1648 at 0.993 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  75.98  74.01  6.86
4.3  Radius of line 1649 at 0.993 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  75.98  74.09  6.86
4.3  Radius of line 1650 at 0.993 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  75.97  74.24  6.86
4.3  Radius of line 1651 at 0.993 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  75.95  74.54  6.86
4.3  Radius of line 1896 at 0.993 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  75.68  74.47  6.86
4.3  Radius of line 2352 at 0.993 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  75.82  74.5  6.86
4.3  Radius of line 3593 at 0.993 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  76.19  74.3  6.85
4.5  Radius of terminal line 3988 at 0.514 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  122.98  87.56  7.07
4.3  Radius of line 3989 at 0.993 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  76.28  73.8  6.81
4.5  Radius of terminal line 5708 at 0.237 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  156.0  15.94  6.02
2.5  Seg length ending at pt. 316 <= 0.1 at 0.0985.  (removed)
     A       X, Y, Z:  57.75  76.69  8.85
2.5  Seg length ending at pt. 389 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  52.18  77.34  9.0
2.5  Seg length ending at pt. 503 <= 0.1 at 0.07.  (removed)
     A       X, Y, Z:  59.5  65.59  5.62
2.5  Seg length ending at pt. 572 <= 0.1 at 0.0707.  (removed)
     A       X, Y, Z:  55.54  61.9  7.83
2.5  Seg length ending at pt. 597 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  55.11  61.65  8.14
2.5  Seg length ending at pt. 599 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  55.11  61.65  8.14
2.5  Seg length ending at pt. 601 <= 0.1 at 0.01.  (removed)
     A       X, Y, Z:  55.11  61.66  8.14
2.5  Seg length ending at pt. 603 <= 0.1 at 0.0173.  (removed)
     A       X, Y, Z:  55.13  61.67  8.16
2.5  Seg length ending at pt. 605 <= 0.1 at 0.0812.  (removed)
     A       X, Y, Z:  55.21  61.73  8.23
2.5  Seg length ending at pt. 611 <= 0.1 at 0.0877.  (removed)
     A       X, Y, Z:  55.22  61.73  8.23
2.5  Seg length ending at pt. 751 <= 0.1 at 0.0854.  (removed)
     A       X, Y, Z:  54.56  60.59  7.95
2.5  Seg length ending at pt. 771 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  52.69  58.21  7.89
2.5  Seg length ending at pt. 1043 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  45.89  62.57  6.58
2.5  Seg length ending at pt. 1101 <= 0.1 at 0.0854.  (removed)
     A       X, Y, Z:  38.72  62.9  6.6
2.5  Seg length ending at pt. 1157 <= 0.1 at 0.0831.  (removed)
     A       X, Y, Z:  38.1  63.23  6.89
2.5  Seg length ending at pt. 1205 <= 0.1 at 0.0632.  (removed)
     A       X, Y, Z:  33.47  63.0  7.6
2.5  Seg length ending at pt. 1281 <= 0.1 at 0.0819.  (removed)
     A       X, Y, Z:  52.32  64.66  8.06
2.5  Seg length ending at pt. 1342 <= 0.1 at 0.098.  (removed)
     A       X, Y, Z:  50.14  67.19  8.94
2.5  Seg length ending at pt. 1419 <= 0.1 at 0.086.  (removed)
     A       X, Y, Z:  48.59  69.45  8.97
2.5  Seg length ending at pt. 1574 <= 0.1 at 0.0412.  (removed)
     A       X, Y, Z:  36.77  74.92  9.63
2.5  Seg length ending at pt. 1576 <= 0.1 at 0.0812.  (removed)
     A       X, Y, Z:  36.76  74.94  9.5
2.5  Seg length ending at pt. 1646 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  75.65  74.02  6.95
2.5  Seg length ending at pt. 1648 <= 0.1 at 0.0714.  (removed)
     A       X, Y, Z:  75.98  74.01  6.86
2.5  Seg length ending at pt. 2167 <= 0.1 at 0.064.  (removed)
     A       X, Y, Z:  60.67  87.76  7.51
2.5  Seg length ending at pt. 2175 <= 0.1 at 0.0866.  (removed)
     A       X, Y, Z:  60.75  87.86  7.58
2.5  Seg length ending at pt. 2206 <= 0.1 at 0.0539.  (removed)
     A       X, Y, Z:  60.08  87.77  7.29
2.5  Seg length ending at pt. 2469 <= 0.1 at 0.0671.  (removed)
     A       X, Y, Z:  84.01  93.6  9.16
2.5  Seg length ending at pt. 2640 <= 0.1 at 0.0906.  (removed)
     A       X, Y, Z:  82.98  93.09  7.59
2.5  Seg length ending at pt. 2661 <= 0.1 at 0.0949.  (removed)
     A       X, Y, Z:  84.63  93.98  7.47
2.5  Seg length ending at pt. 2677 <= 0.1 at 0.0721.  (removed)
     A       X, Y, Z:  85.36  94.44  7.46
2.5  Seg length ending at pt. 2697 <= 0.1 at 0.0849.  (removed)
     A       X, Y, Z:  86.78  95.17  7.4
2.5  Seg length ending at pt. 3032 <= 0.1 at 0.064.  (removed)
     A       X, Y, Z:  78.0  102.91  9.37
2.5  Seg length ending at pt. 3086 <= 0.1 at 0.0762.  (removed)
     A       X, Y, Z:  78.01  104.27  9.39
2.5  Seg length ending at pt. 3107 <= 0.1 at 0.0648.  (removed)
     A       X, Y, Z:  77.91  104.58  9.4
2.5  Seg length ending at pt. 3128 <= 0.1 at 0.1.  (removed)
     A       X, Y, Z:  78.07  104.7  9.4
2.5  Seg length ending at pt. 3197 <= 0.1 at 0.097.  (removed)
     A       X, Y, Z:  79.04  106.8  9.57
2.5  Seg length ending at pt. 3258 <= 0.1 at 0.097.  (removed)
     A       X, Y, Z:  81.89  110.67  9.47
2.5  Seg length ending at pt. 3260 <= 0.1 at 0.0787.  (removed)
     A       X, Y, Z:  81.79  110.74  9.41
2.5  Seg length ending at pt. 3733 <= 0.1 at 0.064.  (removed)
     A       X, Y, Z:  98.88  77.36  5.94
2.5  Seg length ending at pt. 4257 <= 0.1 at 0.0748.  (removed)
     A       X, Y, Z:  90.81  49.58  5.68
2.5  Seg length ending at pt. 4260 <= 0.1 at 0.0964.  (removed)
     A       X, Y, Z:  90.9  49.46  5.91
2.5  Seg length ending at pt. 4351 <= 0.1 at 0.0787.  (removed)
     A       X, Y, Z:  88.3  37.29  5.94
2.5  Seg length ending at pt. 4468 <= 0.1 at 0.0592.  (removed)
     A       X, Y, Z:  98.04  51.62  6.03
2.5  Seg length ending at pt. 4470 <= 0.1 at 0.0917.  (removed)
     A       X, Y, Z:  98.1  51.74  6.0
2.5  Seg length ending at pt. 4497 <= 0.1 at 0.086.  (removed)
     A       X, Y, Z:  99.71  50.51  6.15
2.5  Seg length ending at pt. 4645 <= 0.1 at 0.0592.  (removed)
     A       X, Y, Z:  99.6  50.6  6.15
2.5  Seg length ending at pt. 4752 <= 0.1 at 0.0949.  (removed)
     A       X, Y, Z:  109.51  56.02  4.06
2.5  Seg length ending at pt. 5250 <= 0.1 at 0.0964.  (removed)
     A       X, Y, Z:  122.91  36.1  6.12
2.5  Seg length ending at pt. 5286 <= 0.1 at 0.0663.  (removed)
     A       X, Y, Z:  127.4  32.98  6.16
2.5  Seg length ending at pt. 5444 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  142.69  27.19  6.25
2.5  Seg length ending at pt. 5491 <= 0.1 at 0.0927.  (removed)
     A       X, Y, Z:  145.06  26.12  6.17
2.5  Seg length ending at pt. 5639 <= 0.1 at 0.0671.  (removed)
     A       X, Y, Z:  153.37  18.83  6.19
2.5  Seg length ending at pt. 5655 <= 0.1 at 0.0854.  (removed)
     A       X, Y, Z:  154.44  17.88  6.25
2.5  Seg length ending at pt. 5671 <= 0.1 at 0.09.  (removed)
     A       X, Y, Z:  154.93  17.49  6.21
2.5  Seg length ending at pt. 5798 <= 0.1 at 0.09.  (removed)
     A       X, Y, Z:  129.46  35.57  7.13
2.5  Seg length ending at pt. 5802 <= 0.1 at 0.0995.  (removed)
     A       X, Y, Z:  129.14  35.9  7.18
2.5  Seg length ending at pt. 5804 <= 0.1 at 0.097.  (removed)
     A       X, Y, Z:  129.0  35.98  7.29
2.5  Seg length ending at pt. 5843 <= 0.1 at 0.086.  (removed)
     A       X, Y, Z:  131.09  38.75  6.87
2.5  Seg length ending at pt. 5917 <= 0.1 at 0.099.  (removed)
     A       X, Y, Z:  135.73  43.02  6.57
2.5  Seg length ending at pt. 5968 <= 0.1 at 0.0985.  (removed)
     A       X, Y, Z:  138.25  45.34  6.17
2.5  Seg length ending at pt. 6015 <= 0.1 at 0.0592.  (removed)
     A       X, Y, Z:  141.14  47.8  6.15
2.5  Seg length ending at pt. 6019 <= 0.1 at 0.0995.  (removed)
     A       X, Y, Z:  141.18  47.78  6.13
2.5  Seg length ending at pt. 6062 <= 0.1 at 0.0949.  (removed)
     A       X, Y, Z:  142.6  49.94  6.33
2.5  Seg length ending at pt. 6130 <= 0.1 at 0.0768.  (removed)
     A       X, Y, Z:  146.52  52.82  6.06
2.5  Seg length ending at pt. 6182 <= 0.1 at 0.01.  (removed)
     A       X, Y, Z:  147.15  53.52  6.12
2.5  Seg length ending at pt. 6184 <= 0.1 at 0.03.  (removed)
     A       X, Y, Z:  147.15  53.57  6.12
2.5  Seg length ending at pt. 6201 <= 0.1 at 0.0906.  (removed)
     A       X, Y, Z:  147.16  53.63  6.12
2.5  Seg length ending at pt. 598 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  55.11  61.65  8.14
2.5  Seg length ending at pt. 602 <= 0.1 at 0.0173.  (removed)
     A       X, Y, Z:  55.12  61.66  8.15
2.5  Seg length ending at pt. 1575 <= 0.1 at 0.0922.  (removed)
     A       X, Y, Z:  36.77  74.93  9.58
2.5  Seg length ending at pt. 6183 <= 0.1 at 0.03.  (removed)
     A       X, Y, Z:  147.15  53.54  6.12
2.5  Seg length ending at pt. 600 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  55.11  61.65  8.14
2.5  Seg length ending at pt. 604 <= 0.1 at 0.0755.  (removed)
     A       X, Y, Z:  55.16  61.69  8.18
2.7  Line 3988 of rad 0.514 is an included side branch.  (removed)
     A      X, Y, Z:  122.98  87.56  7.07
2.6  Line 643 and line 693 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  54.82  62.53  8.65
2.6  Line 2248 and line 2264 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  59.93  88.07  7.41
4.4  Line 12 of rad 0.4 links to 11 of rad 0.187.  (no action taken)
     B1      X, Y, Z:  73.8  72.36  6.66
4.4  Line 501 of rad 0.4 links to 500 of rad 0.187.  (no action taken)
     B1      X, Y, Z:  59.77  65.87  5.7
4.4  Line 540 of rad 0.4 links to 539 of rad 0.187.  (no action taken)
     B1      X, Y, Z:  57.57  64.52  5.26
4.4  Line 856 of rad 0.4 links to 855 of rad 0.187.  (no action taken)
     B1      X, Y, Z:  55.59  63.53  5.49
4.4  Line 1659 of rad 0.4 links to 1658 of rad 0.187.  (no action taken)
     B1      X, Y, Z:  77.32  76.08  6.86
4.4  Line 1905 of rad 0.4 links to 1904 of rad 0.187.  (no action taken)
     B1      X, Y, Z:  74.06  76.11  6.89
4.4  Line 2367 of rad 0.4 links to 2366 of rad 0.187.  (no action taken)
     B1      X, Y, Z:  75.65  78.18  6.94
4.4  Line 2415 of rad 0.4 links to 2414 of rad 0.187.  (no action taken)
     B1      X, Y, Z:  79.4  88.89  7.14
4.4  Line 2772 of rad 0.4 links to 2771 of rad 0.187.  (no action taken)
     B1      X, Y, Z:  75.75  80.04  6.96
4.4  Line 2797 of rad 0.4 links to 2796 of rad 0.187.  (no action taken)
     B1      X, Y, Z:  76.1  85.85  7.37
4.4  Line 2833 of rad 0.4 links to 2832 of rad 0.187.  (no action taken)
     B1      X, Y, Z:  75.38  93.71  8.32
4.4  Line 3977 of rad 0.332 links to 3959 of rad 0.144.  (no action taken)
     B1      X, Y, Z:  122.81  87.69  6.89
4.4  Line 4067 of rad 0.4 links to 4066 of rad 0.187.  (no action taken)
     B1      X, Y, Z:  88.48  60.39  6.12
4.4  Line 4217 of rad 0.4 links to 4216 of rad 0.187.  (no action taken)
     B1      X, Y, Z:  90.95  57.04  6.14
4.4  Line 4496 of rad 0.4 links to 4495 of rad 0.144.  (no action taken)
     B1      X, Y, Z:  99.64  50.56  6.15
4.4  Line 4699 of rad 0.4 links to 4698 of rad 0.187.  (no action taken)
     B1      X, Y, Z:  105.42  48.26  6.0
4.4  Line 4788 of rad 0.4 links to 4780 of rad 0.144.  (no action taken)
     B1      X, Y, Z:  106.43  47.69  5.89
4.4  Line 4883 of rad 0.4 links to 4882 of rad 0.187.  (no action taken)
     B1      X, Y, Z:  112.76  44.31  6.13
4.4  Line 4980 of rad 0.4 links to 4971 of rad 0.144.  (no action taken)
     B1      X, Y, Z:  119.81  53.36  5.67
4.4  Line 5262 of rad 0.4 links to 5261 of rad 0.187.  (no action taken)
     B1      X, Y, Z:  124.01  35.45  6.01
2.1  Line 502 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  59.5  65.66  5.62
2.1  Line 571 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  55.49  61.93  7.79
2.1  Line 596 has 10 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  55.11  61.65  8.14
2.1  Line 1042 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  45.91  62.5  6.64
2.1  Line 1100 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  38.72  62.98  6.63
2.1  Line 1156 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  38.08  63.16  6.93
2.1  Line 1204 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  33.49  63.0  7.66
2.1  Line 1280 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  52.29  64.69  7.99
2.1  Line 1341 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  50.06  67.15  8.98
2.1  Line 1418 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  48.56  69.38  9.01
2.1  Line 1573 has 4 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  36.77  74.91  9.67
2.1  Line 1647 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  75.99  73.94  6.87
2.1  Line 2166 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  60.63  87.72  7.48
2.1  Line 2205 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  60.06  87.73  7.26
2.1  Line 2639 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  83.01  93.12  7.67
2.1  Line 2660 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  84.63  94.01  7.56
2.1  Line 2676 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  85.36  94.4  7.52
2.1  Line 2696 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  86.8  95.15  7.48
2.1  Line 3031 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  77.94  102.9  9.39
2.1  Line 3085 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  77.94  104.3  9.39
2.1  Line 3106 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  77.96  104.54  9.39
2.1  Line 3127 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  78.01  104.78  9.4
2.1  Line 3196 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  79.11  106.83  9.63
2.1  Line 3732 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  98.84  77.36  5.99
2.1  Line 4256 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  90.77  49.6  5.62
2.1  Line 4350 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  88.29  37.24  5.88
2.1  Line 4467 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  98.01  51.57  6.04
2.1  Line 4496 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  99.64  50.56  6.15
2.1  Line 4751 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  109.56  55.94  4.07
2.1  Line 5285 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  127.42  33.04  6.14
2.1  Line 5638 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  153.39  18.87  6.24
2.1  Line 5654 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  154.43  17.94  6.31
2.1  Line 5670 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  154.9  17.43  6.27
2.1  Line 5842 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  131.06  38.82  6.91
2.1  Line 5916 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  135.68  43.05  6.65
2.1  Line 5967 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  138.31  45.29  6.11
2.1  Line 6014 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  141.11  47.85  6.14
2.1  Line 6129 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  146.55  52.83  5.99
2.1  Line 6181 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  147.15  53.51  6.12
 
 


Number of type A irregularities = 74
Number of type B1 irregularities = 79
Number of type B2 irregularities = 0
Number of type C irregularities = 0
