# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\M4Neuron3Imaris.ims.swc.swc created with StdSwc version 1.31 on 12/11/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\M4Neuron3Imaris.ims.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  87.83  147.12  11.57
4.3  Radius of line 2 at 4.142 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  87.87  147.18  11.59
4.3  Radius of line 3 at 4.142 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  87.9  147.25  11.6
4.3  Radius of line 4 at 4.142 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  87.96  147.38  11.64
4.3  Radius of line 5 at 4.142 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  88.1  147.65  11.7
4.3  Radius of line 257 at 9.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  87.83  147.12  11.57
4.3  Radius of line 258 at 4.142 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  87.39  147.18  11.59
4.3  Radius of line 565 at 9.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  87.83  147.12  11.57
4.3  Radius of line 566 at 4.142 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  87.62  146.59  11.53
4.3  Radius of line 1044 at 9.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  87.83  147.12  11.57
4.3  Radius of line 1045 at 4.142 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  88.33  147.43  11.68
4.3  Radius of line 2209 at 9.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  87.83  147.12  11.57
4.3  Radius of line 2210 at 2.55 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  88.2  147.15  11.63
4.5  Radius of terminal line 7670 at 0.955 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  139.33  18.83  20.7
4.5  Radius of terminal line 7681 at 0.477 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  138.58  19.53  20.53
2.5  Seg length ending at pt. 2 <= 0.1 at 0.0748.  (removed)
     A       X, Y, Z:  87.87  147.18  11.59
2.5  Seg length ending at pt. 502 <= 0.1 at 0.0762.  (removed)
     A       X, Y, Z:  62.77  149.11  7.75
2.4  Seg length ending at pt. 566 >= 6.0 stdevs above mean at 0.5715.  (no action taken)
     B1      X, Y, Z:  87.62  146.59  11.53
2.5  Seg length ending at pt. 1044 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  87.83  147.12  11.57
2.4  Seg length ending at pt. 1045 >= 6.0 stdevs above mean at 0.5985.  (no action taken)
     B1      X, Y, Z:  88.33  147.43  11.68
2.5  Seg length ending at pt. 1324 <= 0.1 at 0.0877.  (removed)
     A       X, Y, Z:  87.8  176.6  6.96
2.5  Seg length ending at pt. 1652 <= 0.1 at 0.099.  (removed)
     A       X, Y, Z:  84.74  199.68  7.4
2.5  Seg length ending at pt. 2209 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  87.83  147.12  11.57
2.5  Seg length ending at pt. 2397 <= 0.1 at 0.0995.  (removed)
     A       X, Y, Z:  113.68  152.1  9.53
2.5  Seg length ending at pt. 2407 <= 0.1 at 0.0283.  (removed)
     A       X, Y, Z:  114.87  154.09  10.11
2.5  Seg length ending at pt. 2409 <= 0.1 at 0.0436.  (removed)
     A       X, Y, Z:  114.86  154.14  10.06
2.4  Seg length ending at pt. 2742 >= 6.0 stdevs above mean at 0.5577.  (no action taken)
     B1      X, Y, Z:  88.41  146.71  11.56
2.5  Seg length ending at pt. 2871 <= 0.1 at 0.064.  (removed)
     A       X, Y, Z:  87.46  127.37  12.65
2.5  Seg length ending at pt. 3060 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  96.1  118.88  11.72
2.4  Seg length ending at pt. 3110 >= 6.0 stdevs above mean at 0.5561.  (no action taken)
     B1      X, Y, Z:  88.06  147.71  11.72
2.5  Seg length ending at pt. 3291 <= 0.1 at 0.1.  (removed)
     A       X, Y, Z:  75.15  152.92  11.91
2.5  Seg length ending at pt. 3843 <= 0.1 at 0.0224.  (removed)
     A       X, Y, Z:  28.87  169.99  7.13
2.5  Seg length ending at pt. 4067 <= 0.1 at 0.097.  (removed)
     A       X, Y, Z:  104.88  131.56  10.22
2.5  Seg length ending at pt. 4506 <= 0.1 at 0.0707.  (removed)
     A       X, Y, Z:  123.23  108.75  9.99
2.5  Seg length ending at pt. 5008 <= 0.1 at 0.0678.  (removed)
     A       X, Y, Z:  118.09  96.22  14.37
2.5  Seg length ending at pt. 5053 <= 0.1 at 0.0728.  (removed)
     A       X, Y, Z:  117.51  93.85  15.12
2.5  Seg length ending at pt. 5374 <= 0.1 at 0.0583.  (removed)
     A       X, Y, Z:  143.43  75.59  12.07
2.5  Seg length ending at pt. 5710 <= 0.1 at 0.0714.  (removed)
     A       X, Y, Z:  168.04  57.88  12.51
2.5  Seg length ending at pt. 5784 <= 0.1 at 0.09.  (removed)
     A       X, Y, Z:  174.08  49.68  13.52
2.5  Seg length ending at pt. 5856 <= 0.1 at 0.0866.  (removed)
     A       X, Y, Z:  176.23  47.6  13.63
2.5  Seg length ending at pt. 5880 <= 0.1 at 0.0911.  (removed)
     A       X, Y, Z:  177.0  46.95  13.61
2.5  Seg length ending at pt. 6015 <= 0.1 at 0.0735.  (removed)
     A       X, Y, Z:  179.65  42.78  14.13
2.5  Seg length ending at pt. 6094 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  187.74  31.73  14.37
2.5  Seg length ending at pt. 6300 <= 0.1 at 0.0316.  (removed)
     A       X, Y, Z:  176.24  33.54  14.44
2.5  Seg length ending at pt. 6302 <= 0.1 at 0.0707.  (removed)
     A       X, Y, Z:  176.24  33.53  14.55
2.5  Seg length ending at pt. 6352 <= 0.1 at 0.064.  (removed)
     A       X, Y, Z:  175.59  32.65  13.86
2.5  Seg length ending at pt. 6415 <= 0.1 at 0.0825.  (removed)
     A       X, Y, Z:  169.18  57.98  12.27
2.5  Seg length ending at pt. 6509 <= 0.1 at 0.0927.  (removed)
     A       X, Y, Z:  175.27  60.73  11.43
2.5  Seg length ending at pt. 6525 <= 0.1 at 0.0883.  (removed)
     A       X, Y, Z:  176.19  61.44  11.52
2.5  Seg length ending at pt. 6594 <= 0.1 at 0.0707.  (removed)
     A       X, Y, Z:  180.46  63.99  10.7
2.5  Seg length ending at pt. 6672 <= 0.1 at 0.03.  (removed)
     A       X, Y, Z:  186.3  66.56  9.86
2.5  Seg length ending at pt. 6674 <= 0.1 at 0.07.  (removed)
     A       X, Y, Z:  186.31  66.56  9.76
2.5  Seg length ending at pt. 6833 <= 0.1 at 0.0245.  (removed)
     A       X, Y, Z:  157.89  64.93  12.8
2.5  Seg length ending at pt. 6836 <= 0.1 at 0.051.  (removed)
     A       X, Y, Z:  157.72  65.09  12.82
2.5  Seg length ending at pt. 6906 <= 0.1 at 0.0648.  (removed)
     A       X, Y, Z:  135.79  75.74  14.76
2.5  Seg length ending at pt. 7004 <= 0.1 at 0.0748.  (removed)
     A       X, Y, Z:  133.64  70.42  15.32
2.5  Seg length ending at pt. 7083 <= 0.1 at 0.0849.  (removed)
     A       X, Y, Z:  133.37  64.93  15.75
2.5  Seg length ending at pt. 7092 <= 0.1 at 0.064.  (removed)
     A       X, Y, Z:  133.39  65.06  15.79
2.5  Seg length ending at pt. 7104 <= 0.1 at 0.099.  (removed)
     A       X, Y, Z:  133.24  64.49  15.64
2.5  Seg length ending at pt. 7176 <= 0.1 at 0.0574.  (removed)
     A       X, Y, Z:  133.81  59.33  15.98
2.5  Seg length ending at pt. 7297 <= 0.1 at 0.0927.  (removed)
     A       X, Y, Z:  137.91  49.04  16.87
2.5  Seg length ending at pt. 7471 <= 0.1 at 0.0424.  (removed)
     A       X, Y, Z:  141.01  33.45  18.46
2.5  Seg length ending at pt. 7473 <= 0.1 at 0.0866.  (removed)
     A       X, Y, Z:  140.91  33.52  18.48
2.5  Seg length ending at pt. 7475 <= 0.1 at 0.0812.  (removed)
     A       X, Y, Z:  140.83  33.5  18.56
2.5  Seg length ending at pt. 7672 <= 0.1 at 0.0819.  (removed)
     A       X, Y, Z:  139.2  18.99  20.71
2.5  Seg length ending at pt. 7722 <= 0.1 at 0.0283.  (removed)
     A       X, Y, Z:  143.03  25.78  19.44
2.5  Seg length ending at pt. 7730 <= 0.1 at 0.051.  (removed)
     A       X, Y, Z:  143.08  26.01  19.39
2.5  Seg length ending at pt. 7824 <= 0.1 at 0.0648.  (removed)
     A       X, Y, Z:  133.22  60.5  16.11
2.5  Seg length ending at pt. 2408 <= 0.1 at 0.0566.  (removed)
     A       X, Y, Z:  114.87  154.11  10.09
2.5  Seg length ending at pt. 5375 <= 0.1 at 0.0995.  (removed)
     A       X, Y, Z:  143.46  75.61  12.09
2.5  Seg length ending at pt. 6301 <= 0.1 at 0.0707.  (removed)
     A       X, Y, Z:  176.24  33.54  14.48
2.5  Seg length ending at pt. 6673 <= 0.1 at 0.0608.  (removed)
     A       X, Y, Z:  186.31  66.56  9.83
2.5  Seg length ending at pt. 7472 <= 0.1 at 0.0787.  (removed)
     A       X, Y, Z:  140.98  33.47  18.47
2.7  Line 7670 of rad 0.955 is an included side branch.  (removed)
     A      X, Y, Z:  139.33  18.83  20.7
2.6  Line 1 and line 257 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  87.83  147.12  11.57
2.6  Line 1 and line 565 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  87.83  147.12  11.57
2.6  Line 257 and line 565 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  87.83  147.12  11.57
2.6  Line 1327 and line 1332 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  88.35  176.44  6.87
2.6  Line 7298 and line 7312 have the same coordinates.  (second line removed)
     A      X, Y, Z:  138.03  49.2  16.9
4.4  Line 257 of rad 9.0 links to 4 of rad 4.142.  (no action taken)
     B1      X, Y, Z:  87.83  147.12  11.57
4.4  Line 565 of rad 9.0 links to 3 of rad 4.142.  (no action taken)
     B1      X, Y, Z:  87.83  147.12  11.57
4.4  Line 5709 of rad 0.4 links to 5708 of rad 0.188.  (no action taken)
     B1      X, Y, Z:  167.97  57.89  12.5
2.1  Line 1 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  87.83  147.12  11.57
2.1  Line 501 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  62.77  149.18  7.78
2.1  Line 1323 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  87.72  176.62  6.99
2.1  Line 1651 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  84.82  199.71  7.35
2.1  Line 2406 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  114.87  154.07  10.13
2.1  Line 3290 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  75.15  152.84  11.97
2.1  Line 4505 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  123.26  108.71  10.04
2.1  Line 5007 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  118.06  96.21  14.31
2.1  Line 5052 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  117.47  93.86  15.06
2.1  Line 5373 has 4 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  143.39  75.56  12.04
2.1  Line 5709 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  167.97  57.89  12.5
2.1  Line 5783 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  174.11  49.74  13.58
2.1  Line 5855 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  176.3  47.65  13.62
2.1  Line 5879 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  176.95  47.02  13.64
2.1  Line 6093 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  187.68  31.71  14.3
2.1  Line 6299 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  176.24  33.55  14.41
2.1  Line 6351 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  175.59  32.61  13.81
2.1  Line 6414 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  169.14  58.02  12.33
2.1  Line 6508 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  175.21  60.8  11.42
2.1  Line 6524 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  176.14  61.51  11.54
2.1  Line 6593 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  180.47  63.99  10.63
2.1  Line 6671 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  186.3  66.56  9.89
2.1  Line 6905 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  135.84  75.78  14.77
2.1  Line 7003 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  133.7  70.44  15.28
2.1  Line 7082 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  133.39  65.01  15.77
2.1  Line 7103 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  133.31  64.42  15.64
2.1  Line 7175 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  133.79  59.38  16.0
2.1  Line 7296 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  137.85  48.97  16.86
2.1  Line 7470 has 4 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  141.04  33.42  18.46
2.1  Line 7671 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  139.27  19.02  20.74
 
 


Number of type A irregularities = 56
Number of type B1 irregularities = 56
Number of type B2 irregularities = 0
Number of type C irregularities = 0
