# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\M4Neuron1Imaris.ims.swc.swc created with StdSwc version 1.31 on 12/11/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\M4Neuron1Imaris.ims.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  86.64  94.17  3.91
4.3  Radius of line 2 at 2.55 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  86.56  94.37  3.79
4.5  Radius of terminal line 2022 at 0.22 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  60.38  182.18  5.55
4.5  Radius of terminal line 2196 at 0.152 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  59.14  184.01  5.55
4.3  Radius of line 5015 at 1.324 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  86.74  93.78  3.61
4.3  Radius of line 6872 at 1.324 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  86.17  94.18  3.69
4.3  Radius of line 7051 at 1.324 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  86.98  94.39  3.62
2.5  Seg length ending at pt. 3 <= 0.1 at 0.0616.  (removed)
     A       X, Y, Z:  86.53  94.42  3.77
2.5  Seg length ending at pt. 81 <= 0.1 at 0.0671.  (removed)
     A       X, Y, Z:  93.19  110.09  4.67
2.5  Seg length ending at pt. 214 <= 0.1 at 0.08.  (removed)
     A       X, Y, Z:  91.69  138.11  5.57
2.5  Seg length ending at pt. 251 <= 0.1 at 0.0539.  (removed)
     A       X, Y, Z:  92.72  141.27  4.76
2.5  Seg length ending at pt. 256 <= 0.1 at 0.0911.  (removed)
     A       X, Y, Z:  93.05  141.8  4.45
2.5  Seg length ending at pt. 549 <= 0.1 at 0.07.  (removed)
     A       X, Y, Z:  119.06  197.38  2.82
2.5  Seg length ending at pt. 979 <= 0.1 at 0.0949.  (removed)
     A       X, Y, Z:  119.18  196.95  2.53
2.5  Seg length ending at pt. 1183 <= 0.1 at 0.09.  (removed)
     A       X, Y, Z:  113.42  188.46  2.83
2.5  Seg length ending at pt. 1262 <= 0.1 at 0.0985.  (removed)
     A       X, Y, Z:  113.46  183.68  2.52
2.5  Seg length ending at pt. 2000 <= 0.1 at 0.0424.  (removed)
     A       X, Y, Z:  58.74  184.04  5.6
2.5  Seg length ending at pt. 2002 <= 0.1 at 0.0707.  (removed)
     A       X, Y, Z:  58.82  183.97  5.59
2.5  Seg length ending at pt. 2027 <= 0.1 at 0.0583.  (removed)
     A       X, Y, Z:  58.24  184.64  5.59
2.5  Seg length ending at pt. 2100 <= 0.1 at 0.0316.  (removed)
     A       X, Y, Z:  55.2  199.27  5.59
2.5  Seg length ending at pt. 2122 <= 0.1 at 0.0927.  (removed)
     A       X, Y, Z:  55.19  199.21  5.58
2.5  Seg length ending at pt. 2275 <= 0.1 at 0.0806.  (removed)
     A       X, Y, Z:  45.72  176.72  5.56
2.5  Seg length ending at pt. 2346 <= 0.1 at 0.0632.  (removed)
     A       X, Y, Z:  62.59  171.69  5.48
2.5  Seg length ending at pt. 2649 <= 0.1 at 0.052.  (removed)
     A       X, Y, Z:  80.23  177.94  5.55
2.5  Seg length ending at pt. 2689 <= 0.1 at 0.0224.  (removed)
     A       X, Y, Z:  83.91  184.8  4.9
2.5  Seg length ending at pt. 2691 <= 0.1 at 0.064.  (removed)
     A       X, Y, Z:  83.94  184.89  4.88
2.5  Seg length ending at pt. 2798 <= 0.1 at 0.0316.  (removed)
     A       X, Y, Z:  82.55  192.53  4.0
2.5  Seg length ending at pt. 2800 <= 0.1 at 0.0592.  (removed)
     A       X, Y, Z:  82.47  192.57  3.99
2.5  Seg length ending at pt. 3409 <= 0.1 at 0.0592.  (removed)
     A       X, Y, Z:  87.11  156.31  5.56
2.5  Seg length ending at pt. 3481 <= 0.1 at 0.051.  (removed)
     A       X, Y, Z:  101.31  132.12  5.59
2.5  Seg length ending at pt. 3483 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  101.22  132.02  5.56
2.5  Seg length ending at pt. 3646 <= 0.1 at 0.0735.  (removed)
     A       X, Y, Z:  90.65  106.36  4.41
2.5  Seg length ending at pt. 3648 <= 0.1 at 0.0954.  (removed)
     A       X, Y, Z:  90.6  106.41  4.24
2.5  Seg length ending at pt. 3650 <= 0.1 at 0.0964.  (removed)
     A       X, Y, Z:  90.64  106.51  4.07
2.5  Seg length ending at pt. 3739 <= 0.1 at 0.0574.  (removed)
     A       X, Y, Z:  85.15  106.79  2.46
2.5  Seg length ending at pt. 3774 <= 0.1 at 0.0592.  (removed)
     A       X, Y, Z:  84.77  113.69  2.09
2.5  Seg length ending at pt. 3785 <= 0.1 at 0.0616.  (removed)
     A       X, Y, Z:  85.62  115.66  1.72
2.5  Seg length ending at pt. 4338 <= 0.1 at 0.0707.  (removed)
     A       X, Y, Z:  53.04  83.4  3.48
2.5  Seg length ending at pt. 4878 <= 0.1 at 0.0985.  (removed)
     A       X, Y, Z:  70.31  92.0  3.16
2.4  Seg length ending at pt. 5015 >= 6.0 stdevs above mean at 0.75.  (no action taken)
     B1      X, Y, Z:  86.74  93.78  3.61
2.5  Seg length ending at pt. 5330 <= 0.1 at 0.097.  (removed)
     A       X, Y, Z:  107.75  26.03  4.7
2.5  Seg length ending at pt. 6984 <= 0.1 at 0.0954.  (removed)
     A       X, Y, Z:  73.02  82.32  2.26
2.5  Seg length ending at pt. 2001 <= 0.1 at 0.0787.  (removed)
     A       X, Y, Z:  58.77  184.02  5.59
2.5  Seg length ending at pt. 2101 <= 0.1 at 0.0583.  (removed)
     A       X, Y, Z:  55.2  199.25  5.57
2.5  Seg length ending at pt. 2690 <= 0.1 at 0.0548.  (removed)
     A       X, Y, Z:  83.92  184.83  4.89
2.5  Seg length ending at pt. 2799 <= 0.1 at 0.0632.  (removed)
     A       X, Y, Z:  82.52  192.54  4.0
2.5  Seg length ending at pt. 3482 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  101.28  132.09  5.58
2.6  Line 2276 and line 2293 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  45.79  176.72  5.56
2.6  Line 3531 and line 3546 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  100.46  127.56  5.53
2.6  Line 3532 and line 3547 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  100.59  127.64  5.55
2.6  Line 3533 and line 3548 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  100.71  127.74  5.59
2.6  Line 4629 and line 4637 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  64.15  92.48  3.2
4.4  Line 2 of rad 2.55 links to 1 of rad 0.125.  (no action taken)
     B1      X, Y, Z:  86.56  94.37  3.79
4.4  Line 548 of rad 0.4 links to 547 of rad 0.187.  (no action taken)
     B1      X, Y, Z:  119.12  197.36  2.79
4.4  Line 5015 of rad 1.324 links to 4 of rad 0.4.  (no action taken)
     B1      X, Y, Z:  86.74  93.78  3.61
4.4  Line 5329 of rad 0.4 links to 5328 of rad 0.144.  (no action taken)
     B1      X, Y, Z:  107.81  26.06  4.77
2.1  Line 2 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  86.56  94.37  3.79
2.1  Line 80 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  93.16  110.03  4.67
2.1  Line 213 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  91.69  138.19  5.57
2.1  Line 250 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  92.69  141.23  4.78
2.1  Line 255 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  93.02  141.73  4.5
2.1  Line 548 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  119.12  197.36  2.79
2.1  Line 1999 has 4 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  58.71  184.07  5.6
2.1  Line 2026 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  58.27  184.59  5.59
2.1  Line 2099 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  55.2  199.3  5.6
2.1  Line 2274 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  45.64  176.71  5.56
2.1  Line 2345 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  62.65  171.71  5.48
2.1  Line 2648 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  80.22  177.89  5.56
2.1  Line 2688 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  83.9  184.78  4.9
2.1  Line 2797 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  82.58  192.52  4.0
2.1  Line 3408 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  87.16  156.34  5.55
2.1  Line 3480 has 4 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  101.34  132.16  5.6
2.1  Line 3738 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  85.17  106.74  2.48
2.1  Line 3773 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  84.74  113.64  2.1
2.1  Line 3784 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  85.61  115.6  1.71
2.1  Line 4337 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  53.09  83.43  3.52
2.1  Line 5329 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  107.81  26.06  4.77
 
 


Number of type A irregularities = 39
Number of type B1 irregularities = 38
Number of type B2 irregularities = 0
Number of type C irregularities = 0
