# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\M3Neuron3Imaris.ims.swc.swc created with StdSwc version 1.31 on 12/11/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\M3Neuron3Imaris.ims.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  91.54  142.3  12.74
4.3  Radius of line 2 at 3.05 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  91.88  142.65  12.72
4.3  Radius of line 3 at 1.656 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  91.99  142.77  12.71
4.3  Radius of line 4 at 1.656 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  92.09  142.89  12.71
4.3  Radius of line 5 at 0.776 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  92.23  143.09  12.72
4.3  Radius of line 4006 at 0.579 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  171.65  125.53  12.53
4.3  Radius of line 4156 at 1.606 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  91.82  143.13  12.74
4.3  Radius of line 4157 at 0.644 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  91.72  143.54  12.76
4.3  Radius of line 4206 at 1.606 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  91.32  142.89  12.66
4.3  Radius of line 4207 at 0.644 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  90.91  143.0  12.62
4.3  Radius of line 5555 at 1.606 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  91.54  142.3  12.74
4.3  Radius of line 5556 at 0.644 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  91.92  142.22  12.66
4.3  Radius of line 5935 at 0.638 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  103.49  80.88  11.42
4.3  Radius of line 5936 at 0.728 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  103.45  80.65  11.39
4.3  Radius of line 5937 at 0.822 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  103.4  80.41  11.35
4.3  Radius of line 5938 at 0.574 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  103.74  80.25  11.2
4.3  Radius of line 5942 at 0.79 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  103.36  80.18  11.31
4.3  Radius of line 5943 at 0.65 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  103.34  79.94  11.25
4.3  Radius of line 5945 at 0.808 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  103.14  79.44  11.11
4.3  Radius of line 5946 at 1.107 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  102.9  79.25  11.03
4.3  Radius of line 5947 at 1.298 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  102.65  79.11  10.96
4.3  Radius of line 5948 at 0.925 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  102.64  79.52  11.06
4.3  Radius of line 5949 at 0.714 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  102.52  79.83  11.14
4.3  Radius of line 5955 at 1.017 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  102.39  78.99  10.9
4.3  Radius of line 5956 at 0.676 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  102.15  78.89  10.85
4.5  Radius of terminal line 6223 at 0.391 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  77.73  57.34  8.07
4.3  Radius of line 6251 at 0.686 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  103.36  79.48  11.14
4.3  Radius of line 6252 at 0.876 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  103.37  79.25  11.07
4.3  Radius of line 6253 at 0.956 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  103.38  79.01  11.01
4.3  Radius of line 6254 at 0.959 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  103.41  78.78  10.97
4.3  Radius of line 6255 at 0.91 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  103.47  78.54  10.93
4.3  Radius of line 6256 at 0.836 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  103.54  78.31  10.9
4.3  Radius of line 6257 at 0.762 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  103.62  78.08  10.87
4.3  Radius of line 6258 at 0.703 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  103.69  77.85  10.85
4.3  Radius of line 6259 at 0.652 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  103.76  77.62  10.84
4.3  Radius of line 6260 at 0.6 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  103.83  77.39  10.83
4.3  Radius of line 6315 at 0.624 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  105.4  66.48  11.45
4.3  Radius of line 6325 at 0.706 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  105.41  66.26  11.42
4.3  Radius of line 6326 at 0.79 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  105.4  66.03  11.39
4.3  Radius of line 6327 at 0.869 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  105.38  65.79  11.36
4.3  Radius of line 6328 at 0.932 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  105.35  65.56  11.32
4.3  Radius of line 6329 at 0.985 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  105.31  65.32  11.28
4.3  Radius of line 6330 at 1.035 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  105.28  65.09  11.24
4.3  Radius of line 6331 at 1.072 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  105.25  64.86  11.19
4.3  Radius of line 6332 at 1.086 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  105.23  64.64  11.13
4.3  Radius of line 6333 at 1.079 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  105.21  64.42  11.06
4.3  Radius of line 6334 at 1.053 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  105.21  64.19  11.01
4.3  Radius of line 6335 at 1.01 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  105.24  63.96  10.96
4.3  Radius of line 6336 at 0.954 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  105.27  63.73  10.92
4.3  Radius of line 6337 at 0.885 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  105.3  63.5  10.89
4.3  Radius of line 6338 at 0.809 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  105.34  63.27  10.87
4.3  Radius of line 6339 at 0.726 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  105.37  63.04  10.85
4.3  Radius of line 6340 at 0.639 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  105.41  62.81  10.84
4.3  Radius of line 6393 at 0.595 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  106.53  54.7  11.35
4.3  Radius of line 6394 at 0.631 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  106.58  54.47  11.34
4.3  Radius of line 6402 at 0.654 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  106.63  54.23  11.32
4.3  Radius of line 6409 at 0.668 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  106.68  53.99  11.29
4.3  Radius of line 6410 at 0.676 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  106.73  53.75  11.27
4.3  Radius of line 6411 at 0.676 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  106.76  53.5  11.26
4.3  Radius of line 6412 at 0.67 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  106.78  53.24  11.25
4.3  Radius of line 6413 at 0.651 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  106.78  52.97  11.23
4.3  Radius of line 6414 at 0.605 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  106.78  52.69  11.2
2.4  Seg length ending at pt. 1852 >= 6.0 stdevs above mean at 0.8501.  (no action taken)
     B1      X, Y, Z:  109.11  153.41  12.56
2.4  Seg length ending at pt. 1853 >= 6.0 stdevs above mean at 0.8682.  (no action taken)
     B1      X, Y, Z:  109.8  152.97  12.27
2.4  Seg length ending at pt. 1854 >= 6.0 stdevs above mean at 0.8993.  (no action taken)
     B1      X, Y, Z:  110.5  152.45  12.05
2.5  Seg length ending at pt. 2227 <= 0.1 at 0.0539.  (removed)
     A       X, Y, Z:  123.27  136.41  13.33
2.5  Seg length ending at pt. 2301 <= 0.1 at 0.0735.  (removed)
     A       X, Y, Z:  125.73  132.03  12.98
2.5  Seg length ending at pt. 2373 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  126.66  128.72  12.91
2.5  Seg length ending at pt. 2423 <= 0.1 at 0.0458.  (removed)
     A       X, Y, Z:  129.94  122.71  13.1
2.5  Seg length ending at pt. 2425 <= 0.1 at 0.0755.  (removed)
     A       X, Y, Z:  130.0  122.65  13.02
2.5  Seg length ending at pt. 2484 <= 0.1 at 0.0436.  (removed)
     A       X, Y, Z:  130.88  120.67  13.11
2.5  Seg length ending at pt. 2486 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  130.77  120.58  13.14
2.5  Seg length ending at pt. 2710 <= 0.1 at 0.0574.  (removed)
     A       X, Y, Z:  136.88  104.5  13.71
2.5  Seg length ending at pt. 2723 <= 0.1 at 0.0728.  (removed)
     A       X, Y, Z:  136.75  104.68  13.88
2.5  Seg length ending at pt. 3413 <= 0.1 at 0.0938.  (removed)
     A       X, Y, Z:  159.62  110.73  9.1
2.5  Seg length ending at pt. 3500 <= 0.1 at 0.0656.  (removed)
     A       X, Y, Z:  167.55  109.87  8.49
2.5  Seg length ending at pt. 3763 <= 0.1 at 0.0831.  (removed)
     A       X, Y, Z:  151.94  121.06  11.05
2.5  Seg length ending at pt. 3853 <= 0.1 at 0.0412.  (removed)
     A       X, Y, Z:  160.29  119.92  12.01
2.5  Seg length ending at pt. 3855 <= 0.1 at 0.0831.  (removed)
     A       X, Y, Z:  160.26  119.8  11.99
2.5  Seg length ending at pt. 4034 <= 0.1 at 0.049.  (removed)
     A       X, Y, Z:  174.02  127.59  13.26
2.5  Seg length ending at pt. 4056 <= 0.1 at 0.0141.  (removed)
     A       X, Y, Z:  174.26  127.69  13.25
2.5  Seg length ending at pt. 4058 <= 0.1 at 0.0224.  (removed)
     A       X, Y, Z:  174.24  127.71  13.24
2.5  Seg length ending at pt. 4060 <= 0.1 at 0.0787.  (removed)
     A       X, Y, Z:  174.14  127.79  13.22
2.5  Seg length ending at pt. 4108 <= 0.1 at 0.0707.  (removed)
     A       X, Y, Z:  159.62  119.98  11.78
2.4  Seg length ending at pt. 4206 >= 6.0 stdevs above mean at 0.6122.  (no action taken)
     B1      X, Y, Z:  91.32  142.89  12.66
2.5  Seg length ending at pt. 4946 <= 0.1 at 0.0883.  (removed)
     A       X, Y, Z:  58.23  164.99  13.41
2.5  Seg length ending at pt. 5170 <= 0.1 at 0.0837.  (removed)
     A       X, Y, Z:  47.42  181.66  13.7
2.5  Seg length ending at pt. 5404 <= 0.1 at 0.0787.  (removed)
     A       X, Y, Z:  33.32  204.75  14.93
2.5  Seg length ending at pt. 5461 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  30.77  208.03  15.54
2.5  Seg length ending at pt. 5555 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  91.54  142.3  12.74
2.5  Seg length ending at pt. 6037 <= 0.1 at 0.0995.  (removed)
     A       X, Y, Z:  95.17  72.95  9.96
2.4  Seg length ending at pt. 6958 >= 6.0 stdevs above mean at 0.5757.  (no action taken)
     B1      X, Y, Z:  104.07  45.57  9.92
2.5  Seg length ending at pt. 7051 <= 0.1 at 0.0678.  (removed)
     A       X, Y, Z:  102.09  37.55  10.24
2.5  Seg length ending at pt. 7079 <= 0.1 at 0.064.  (removed)
     A       X, Y, Z:  102.05  37.15  10.18
2.5  Seg length ending at pt. 7397 <= 0.1 at 0.0608.  (removed)
     A       X, Y, Z:  103.81  83.22  11.47
2.5  Seg length ending at pt. 7399 <= 0.1 at 0.0877.  (removed)
     A       X, Y, Z:  103.95  83.28  11.35
2.5  Seg length ending at pt. 7596 <= 0.1 at 0.051.  (removed)
     A       X, Y, Z:  118.05  87.8  8.85
2.5  Seg length ending at pt. 8094 <= 0.1 at 0.0831.  (removed)
     A       X, Y, Z:  127.6  94.43  9.63
2.5  Seg length ending at pt. 8137 <= 0.1 at 0.0714.  (removed)
     A       X, Y, Z:  130.63  94.42  9.41
2.5  Seg length ending at pt. 8177 <= 0.1 at 0.086.  (removed)
     A       X, Y, Z:  134.91  93.5  9.14
2.5  Seg length ending at pt. 8621 <= 0.1 at 0.0831.  (removed)
     A       X, Y, Z:  121.34  101.13  10.31
2.5  Seg length ending at pt. 2424 <= 0.1 at 0.0917.  (removed)
     A       X, Y, Z:  129.95  122.69  13.06
2.5  Seg length ending at pt. 2485 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  130.84  120.64  13.12
2.5  Seg length ending at pt. 3854 <= 0.1 at 0.0831.  (removed)
     A       X, Y, Z:  160.28  119.88  12.0
2.5  Seg length ending at pt. 4057 <= 0.1 at 0.0245.  (removed)
     A       X, Y, Z:  174.26  127.7  13.24
2.5  Seg length ending at pt. 4059 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  174.2  127.74  13.23
4.4  Line 5945 of rad 0.808 links to 5944 of rad 0.4.  (no action taken)
     B1      X, Y, Z:  103.14  79.44  11.11
2.1  Line 2226 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  123.29  136.41  13.38
2.1  Line 2300 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  125.74  132.01  12.91
2.1  Line 2422 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  129.93  122.73  13.14
2.1  Line 2483 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  130.91  120.7  13.1
2.1  Line 2709 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  136.86  104.55  13.73
2.1  Line 2722 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  136.79  104.67  13.82
2.1  Line 3412 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  159.68  110.77  9.16
2.1  Line 3499 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  167.52  109.82  8.52
2.1  Line 3762 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  151.95  121.14  11.03
2.1  Line 3852 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  160.3  119.96  12.01
2.1  Line 4033 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  174.06  127.57  13.28
2.1  Line 4055 has 6 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  174.27  127.68  13.25
2.1  Line 4107 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  159.65  119.93  11.74
2.1  Line 5169 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  47.48  181.71  13.67
2.1  Line 5403 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  33.38  204.8  14.94
2.1  Line 5460 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  30.75  207.97  15.61
2.1  Line 6036 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  95.1  72.96  9.89
2.1  Line 7050 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  102.03  37.56  10.21
2.1  Line 7078 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  102.09  37.11  10.15
2.1  Line 8093 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  127.67  94.47  9.65
2.1  Line 8136 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  130.64  94.35  9.4
2.1  Line 8176 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  134.88  93.54  9.21
2.1  Line 8620 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  121.38  101.06  10.33
 
 


Number of type A irregularities = 39
Number of type B1 irregularities = 91
Number of type B2 irregularities = 0
Number of type C irregularities = 0
