# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\M2Neuron1Imaris.ims.swc.swc created with StdSwc version 1.31 on 12/11/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\M2Neuron1Imaris.ims.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  106.27  218.91  4.03
4.3  Radius of line 2 at 5.107 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  106.48  219.11  4.03
4.3  Radius of line 3 at 5.107 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  106.68  219.32  4.03
4.3  Radius of line 4 at 1.845 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  106.9  219.62  4.04
4.3  Radius of line 119 at 10.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  106.27  218.91  4.03
4.3  Radius of line 120 at 5.107 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  106.64  219.28  4.03
4.3  Radius of line 121 at 1.845 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  106.8  219.59  4.03
4.3  Radius of line 785 at 10.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  106.27  218.91  4.03
4.3  Radius of line 786 at 2.8 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  106.51  218.72  4.02
4.3  Radius of line 7002 at 1.612 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  54.09  22.92  2.45
4.3  Radius of line 7003 at 1.63 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  54.03  22.69  2.42
4.3  Radius of line 7004 at 1.652 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  53.96  22.46  2.39
4.3  Radius of line 7005 at 1.676 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  53.88  22.23  2.38
4.3  Radius of line 7006 at 1.7 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  53.8  22.0  2.39
4.3  Radius of line 7007 at 1.722 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  53.7  21.78  2.39
4.3  Radius of line 7025 at 1.721 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  53.59  21.57  2.38
4.3  Radius of line 7026 at 1.716 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  53.47  21.36  2.38
4.3  Radius of line 7027 at 1.712 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  53.34  21.15  2.38
4.3  Radius of line 7028 at 1.724 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  53.19  20.95  2.38
4.3  Radius of line 7029 at 1.747 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  53.01  20.77  2.39
4.3  Radius of line 7030 at 1.768 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  52.81  20.62  2.39
4.5  Radius of terminal line 7031 at 1.78 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  52.58  20.5  2.39
2.5  Seg length ending at pt. 94 <= 0.1 at 0.0748.  (removed)
     A       X, Y, Z:  114.37  234.97  5.9
2.4  Seg length ending at pt. 120 >= 6.0 stdevs above mean at 0.5233.  (no action taken)
     B1      X, Y, Z:  106.64  219.28  4.03
2.5  Seg length ending at pt. 210 <= 0.1 at 0.0781.  (removed)
     A       X, Y, Z:  103.34  232.37  4.09
2.5  Seg length ending at pt. 359 <= 0.1 at 0.0787.  (removed)
     A       X, Y, Z:  106.97  244.24  3.47
2.5  Seg length ending at pt. 625 <= 0.1 at 0.098.  (removed)
     A       X, Y, Z:  96.51  245.2  4.39
2.5  Seg length ending at pt. 764 <= 0.1 at 0.0806.  (removed)
     A       X, Y, Z:  96.78  261.72  4.81
2.5  Seg length ending at pt. 785 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  106.27  218.91  4.03
2.5  Seg length ending at pt. 964 <= 0.1 at 0.0436.  (removed)
     A       X, Y, Z:  125.97  229.66  3.47
2.5  Seg length ending at pt. 966 <= 0.1 at 0.0872.  (removed)
     A       X, Y, Z:  125.99  229.56  3.55
2.5  Seg length ending at pt. 1653 <= 0.1 at 0.0781.  (removed)
     A       X, Y, Z:  138.55  195.36  3.25
2.5  Seg length ending at pt. 1988 <= 0.1 at 0.0927.  (removed)
     A       X, Y, Z:  147.19  191.87  4.04
2.5  Seg length ending at pt. 1994 <= 0.1 at 0.07.  (removed)
     A       X, Y, Z:  148.17  192.02  4.23
2.5  Seg length ending at pt. 2029 <= 0.1 at 0.0608.  (removed)
     A       X, Y, Z:  149.14  192.57  4.27
2.5  Seg length ending at pt. 2146 <= 0.1 at 0.0927.  (removed)
     A       X, Y, Z:  159.06  197.72  4.93
2.5  Seg length ending at pt. 2208 <= 0.1 at 0.0458.  (removed)
     A       X, Y, Z:  166.5  198.76  4.66
2.5  Seg length ending at pt. 2210 <= 0.1 at 0.0949.  (removed)
     A       X, Y, Z:  166.44  198.76  4.54
2.4  Seg length ending at pt. 2262 >= 6.0 stdevs above mean at 0.6451.  (no action taken)
     B1      X, Y, Z:  106.19  218.31  3.99
2.5  Seg length ending at pt. 2334 <= 0.1 at 0.0762.  (removed)
     A       X, Y, Z:  92.98  216.61  3.56
2.5  Seg length ending at pt. 2382 <= 0.1 at 0.086.  (removed)
     A       X, Y, Z:  89.68  219.46  4.21
2.5  Seg length ending at pt. 2527 <= 0.1 at 0.052.  (removed)
     A       X, Y, Z:  83.89  226.3  3.66
2.5  Seg length ending at pt. 2648 <= 0.1 at 0.09.  (removed)
     A       X, Y, Z:  72.26  227.99  3.97
2.5  Seg length ending at pt. 2684 <= 0.1 at 0.07.  (removed)
     A       X, Y, Z:  76.75  231.59  3.96
2.5  Seg length ending at pt. 2747 <= 0.1 at 0.0735.  (removed)
     A       X, Y, Z:  74.95  232.9  3.47
2.5  Seg length ending at pt. 2805 <= 0.1 at 0.086.  (removed)
     A       X, Y, Z:  72.57  233.48  3.82
2.5  Seg length ending at pt. 2977 <= 0.1 at 0.0728.  (removed)
     A       X, Y, Z:  52.82  242.72  4.66
2.5  Seg length ending at pt. 3175 <= 0.1 at 0.09.  (removed)
     A       X, Y, Z:  82.9  211.12  2.98
2.5  Seg length ending at pt. 3279 <= 0.1 at 0.0735.  (removed)
     A       X, Y, Z:  73.35  216.81  4.08
2.5  Seg length ending at pt. 3289 <= 0.1 at 0.1.  (removed)
     A       X, Y, Z:  73.15  216.53  5.26
2.5  Seg length ending at pt. 3334 <= 0.1 at 0.0707.  (removed)
     A       X, Y, Z:  72.15  217.74  4.07
2.5  Seg length ending at pt. 3388 <= 0.1 at 0.0707.  (removed)
     A       X, Y, Z:  68.77  219.22  4.08
2.5  Seg length ending at pt. 3553 <= 0.1 at 0.064.  (removed)
     A       X, Y, Z:  50.35  225.07  4.13
2.5  Seg length ending at pt. 3558 <= 0.1 at 0.0917.  (removed)
     A       X, Y, Z:  50.34  225.09  4.15
2.5  Seg length ending at pt. 3661 <= 0.1 at 0.09.  (removed)
     A       X, Y, Z:  36.14  224.42  4.63
2.5  Seg length ending at pt. 3848 <= 0.1 at 0.0812.  (removed)
     A       X, Y, Z:  107.28  208.2  4.96
2.5  Seg length ending at pt. 3888 <= 0.1 at 0.0755.  (removed)
     A       X, Y, Z:  109.42  206.53  5.51
2.5  Seg length ending at pt. 4053 <= 0.1 at 0.0648.  (removed)
     A       X, Y, Z:  109.36  195.47  3.25
2.5  Seg length ending at pt. 4055 <= 0.1 at 0.0616.  (removed)
     A       X, Y, Z:  109.26  195.51  3.32
2.5  Seg length ending at pt. 4057 <= 0.1 at 0.0728.  (removed)
     A       X, Y, Z:  109.24  195.42  3.41
2.5  Seg length ending at pt. 4064 <= 0.1 at 0.086.  (removed)
     A       X, Y, Z:  110.49  194.48  3.26
2.5  Seg length ending at pt. 4143 <= 0.1 at 0.097.  (removed)
     A       X, Y, Z:  114.95  194.19  3.52
2.5  Seg length ending at pt. 4216 <= 0.1 at 0.0762.  (removed)
     A       X, Y, Z:  117.63  193.75  3.15
2.5  Seg length ending at pt. 4270 <= 0.1 at 0.0866.  (removed)
     A       X, Y, Z:  111.08  192.07  3.34
2.5  Seg length ending at pt. 4432 <= 0.1 at 0.086.  (removed)
     A       X, Y, Z:  117.91  185.38  4.18
2.5  Seg length ending at pt. 4495 <= 0.1 at 0.0906.  (removed)
     A       X, Y, Z:  120.0  180.93  4.5
2.5  Seg length ending at pt. 6039 <= 0.1 at 0.0877.  (removed)
     A       X, Y, Z:  83.94  81.53  2.49
2.5  Seg length ending at pt. 6052 <= 0.1 at 0.099.  (removed)
     A       X, Y, Z:  83.93  81.52  2.48
2.5  Seg length ending at pt. 6139 <= 0.1 at 0.0616.  (removed)
     A       X, Y, Z:  81.62  74.66  2.31
2.5  Seg length ending at pt. 6210 <= 0.1 at 0.0917.  (removed)
     A       X, Y, Z:  81.06  72.58  2.23
2.5  Seg length ending at pt. 6669 <= 0.1 at 0.0995.  (removed)
     A       X, Y, Z:  60.8  44.37  2.46
2.5  Seg length ending at pt. 7066 <= 0.1 at 0.0938.  (removed)
     A       X, Y, Z:  65.21  50.76  2.73
2.5  Seg length ending at pt. 965 <= 0.1 at 0.0866.  (removed)
     A       X, Y, Z:  125.97  229.62  3.49
2.5  Seg length ending at pt. 2209 <= 0.1 at 0.0877.  (removed)
     A       X, Y, Z:  166.49  198.77  4.62
2.6  Line 1 and line 119 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  106.27  218.91  4.03
4.4  Line 1345 of rad 0.4 links to 1344 of rad 0.192.  (no action taken)
     B1      X, Y, Z:  126.29  197.65  3.92
4.4  Line 6958 of rad 1.111 links to 6957 of rad 0.482.  (no action taken)
     B1      X, Y, Z:  54.02  23.48  2.46
4.4  Line 7010 of rad 0.465 links to 7009 of rad 0.15.  (no action taken)
     B1      X, Y, Z:  54.07  21.68  2.37
4.4  Line 7011 of rad 1.066 links to 7010 of rad 0.465.  (no action taken)
     B1      X, Y, Z:  54.14  21.58  2.36
2.1  Line 93 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  114.35  235.01  5.96
2.1  Line 209 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  103.34  232.32  4.03
2.1  Line 358 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  106.98  244.3  3.42
2.1  Line 624 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  96.59  245.24  4.43
2.1  Line 763 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  96.78  261.73  4.89
2.1  Line 963 has 4 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  125.96  229.69  3.44
2.1  Line 1652 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  138.59  195.33  3.19
2.1  Line 1993 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  148.15  192.05  4.29
2.1  Line 2028 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  149.14  192.63  4.28
2.1  Line 2145 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  159.05  197.7  5.02
2.1  Line 2207 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  166.52  198.75  4.7
2.1  Line 2333 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  92.98  216.54  3.53
2.1  Line 2381 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  89.67  219.49  4.13
2.1  Line 2526 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  83.86  226.27  3.63
2.1  Line 2683 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  76.81  231.57  3.93
2.1  Line 2804 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  72.53  233.41  3.85
2.1  Line 3278 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  73.4  216.83  4.03
2.1  Line 3333 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  72.1  217.71  4.11
2.1  Line 3387 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  68.73  219.19  4.13
2.1  Line 3552 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  50.36  225.01  4.11
2.1  Line 3847 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  107.36  208.19  4.97
2.1  Line 3887 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  109.38  206.48  5.55
2.1  Line 4063 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  110.46  194.44  3.19
2.1  Line 4142 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  114.92  194.21  3.61
2.1  Line 4215 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  117.6  193.68  3.15
2.1  Line 4269 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  111.15  192.06  3.29
2.1  Line 4431 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  117.91  185.31  4.13
2.1  Line 6209 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  80.98  72.62  2.21
 
 


Number of type A irregularities = 50
Number of type B1 irregularities = 57
Number of type B2 irregularities = 0
Number of type C irregularities = 0
