# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\M16Neuron5Imaris.ims.swc.swc created with StdSwc version 1.31 on 12/11/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\M16Neuron5Imaris.ims.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  73.54  74.34  4.5
4.5  Radius of terminal line 53 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  71.52  81.54  5.24
4.5  Radius of terminal line 72 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  71.29  82.51  5.23
4.5  Radius of terminal line 77 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  69.21  81.38  4.67
4.5  Radius of terminal line 101 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  70.11  83.6  5.43
4.5  Radius of terminal line 120 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  70.64  83.77  5.36
4.5  Radius of terminal line 131 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  68.84  83.25  5.52
4.5  Radius of terminal line 155 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  65.76  83.25  5.79
4.5  Radius of terminal line 163 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  65.92  83.63  5.9
4.5  Radius of terminal line 165 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  65.02  83.54  6.37
4.5  Radius of terminal line 238 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  64.37  87.69  5.09
4.5  Radius of terminal line 261 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  65.6  87.87  5.21
4.5  Radius of terminal line 281 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  64.08  87.79  5.08
4.5  Radius of terminal line 282 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  63.37  86.23  3.8
4.5  Radius of terminal line 342 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  78.19  84.87  4.73
4.3  Radius of line 343 at 9.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  73.54  74.34  4.5
4.3  Radius of line 344 at 6.519 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  73.83  74.77  4.51
4.3  Radius of line 345 at 4.516 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  74.05  75.05  4.5
4.5  Radius of terminal line 431 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  88.66  73.85  2.6
4.5  Radius of terminal line 437 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  79.51  79.64  3.44
4.5  Radius of terminal line 462 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  81.59  80.96  5.31
4.5  Radius of terminal line 516 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  81.41  91.7  1.81
4.3  Radius of line 517 at 9.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  73.54  74.34  4.5
4.5  Radius of terminal line 551 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  71.57  71.05  6.36
4.5  Radius of terminal line 589 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  66.67  67.14  1.81
4.5  Radius of terminal line 627 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  64.5  74.53  4.28
4.5  Radius of terminal line 647 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  61.12  72.56  4.63
4.5  Radius of terminal line 651 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  60.79  72.4  4.6
4.5  Radius of terminal line 660 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  59.77  72.52  4.63
4.5  Radius of terminal line 664 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  59.33  72.55  4.73
4.5  Radius of terminal line 671 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  58.47  72.19  4.83
4.5  Radius of terminal line 701 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  53.8  68.78  5.7
4.5  Radius of terminal line 704 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  53.77  68.03  5.45
4.5  Radius of terminal line 714 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  52.86  67.25  5.48
4.5  Radius of terminal line 720 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  52.58  67.2  5.51
4.5  Radius of terminal line 730 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  51.71  66.94  4.52
4.5  Radius of terminal line 755 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  48.81  68.22  5.78
4.5  Radius of terminal line 756 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  49.99  66.48  5.67
4.5  Radius of terminal line 794 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  66.15  78.16  4.25
4.5  Radius of terminal line 799 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  65.46  76.21  4.36
4.5  Radius of terminal line 831 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  59.52  75.98  3.65
4.5  Radius of terminal line 837 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  58.68  75.75  3.65
4.5  Radius of terminal line 846 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  58.44  76.23  4.84
4.5  Radius of terminal line 886 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  50.35  72.85  3.8
4.3  Radius of line 887 at 9.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  73.54  74.34  4.5
4.3  Radius of line 888 at 6.367 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  73.69  74.19  4.51
4.3  Radius of line 889 at 4.253 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  73.87  74.0  4.51
4.5  Radius of terminal line 942 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  77.0  66.36  4.85
4.5  Radius of terminal line 971 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  78.78  64.01  4.84
4.5  Radius of terminal line 976 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  80.65  63.96  4.85
4.5  Radius of terminal line 980 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  80.22  63.27  4.94
4.5  Radius of terminal line 996 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  82.39  61.73  5.55
4.5  Radius of terminal line 1002 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  82.94  62.16  5.47
4.5  Radius of terminal line 1008 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  83.41  62.42  5.51
4.5  Radius of terminal line 1030 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  84.78  63.43  5.37
4.5  Radius of terminal line 1031 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  86.03  63.86  5.43
4.5  Radius of terminal line 1044 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  79.98  61.68  5.68
4.5  Radius of terminal line 1052 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  82.31  60.69  4.94
4.5  Radius of terminal line 1070 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  85.43  59.73  4.82
4.5  Radius of terminal line 1093 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  86.66  61.49  4.84
4.5  Radius of terminal line 1108 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  86.67  60.15  4.75
4.5  Radius of terminal line 1113 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  86.25  58.95  4.75
4.5  Radius of terminal line 1129 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  87.66  56.17  4.97
4.5  Radius of terminal line 1155 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  88.12  53.59  5.2
4.5  Radius of terminal line 1196 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  91.29  50.21  7.66
4.5  Radius of terminal line 1223 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  91.58  50.35  7.66
4.5  Radius of terminal line 1247 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  91.67  50.03  7.66
4.5  Radius of terminal line 1255 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  93.04  50.03  5.28
4.5  Radius of terminal line 1259 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  92.52  49.71  5.34
4.5  Radius of terminal line 1267 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  92.57  48.52  5.12
4.5  Radius of terminal line 1283 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  92.51  46.65  5.21
4.5  Radius of terminal line 1302 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  92.91  45.77  5.21
4.5  Radius of terminal line 1323 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  92.25  44.72  5.3
4.5  Radius of terminal line 1346 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  92.93  44.23  5.22
4.5  Radius of terminal line 1356 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  95.21  46.46  5.28
4.5  Radius of terminal line 1363 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  96.09  45.58  5.2
4.5  Radius of terminal line 1383 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  94.07  51.48  5.67
4.5  Radius of terminal line 1389 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  94.27  51.79  5.75
4.5  Radius of terminal line 1397 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  94.54  52.11  5.78
4.5  Radius of terminal line 1409 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  94.9  52.31  5.78
4.5  Radius of terminal line 1434 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  98.9  48.75  5.32
4.5  Radius of terminal line 1457 at 0.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  78.96  61.14  5.63
2.5  Seg length ending at pt. 92 <= 0.1 at 0.0927.  (removed)
     A       X, Y, Z:  69.35  82.97  5.5
2.5  Seg length ending at pt. 94 <= 0.1 at 0.0995.  (removed)
     A       X, Y, Z:  69.47  83.12  5.53
2.5  Seg length ending at pt. 148 <= 0.1 at 0.07.  (removed)
     A       X, Y, Z:  65.31  83.38  6.42
2.5  Seg length ending at pt. 221 <= 0.1 at 0.086.  (removed)
     A       X, Y, Z:  64.01  86.12  3.91
2.5  Seg length ending at pt. 248 <= 0.1 at 0.0877.  (removed)
     A       X, Y, Z:  64.59  87.0  4.53
2.4  Seg length ending at pt. 344 >= 6.0 stdevs above mean at 0.5187.  (no action taken)
     B1      X, Y, Z:  73.83  74.77  4.51
2.5  Seg length ending at pt. 461 <= 0.1 at 0.099.  (removed)
     A       X, Y, Z:  81.52  80.93  5.26
2.4  Seg length ending at pt. 518 >= 6.0 stdevs above mean at 0.5883.  (no action taken)
     B1      X, Y, Z:  73.0  74.57  4.54
2.5  Seg length ending at pt. 657 <= 0.1 at 0.0911.  (removed)
     A       X, Y, Z:  59.61  72.14  4.59
2.5  Seg length ending at pt. 835 <= 0.1 at 0.0787.  (removed)
     A       X, Y, Z:  58.78  75.83  3.85
2.5  Seg length ending at pt. 887 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  73.54  74.34  4.5
2.5  Seg length ending at pt. 988 <= 0.1 at 0.0648.  (removed)
     A       X, Y, Z:  81.38  61.99  4.93
2.5  Seg length ending at pt. 1067 <= 0.1 at 0.0949.  (removed)
     A       X, Y, Z:  85.22  59.42  4.87
2.5  Seg length ending at pt. 1199 <= 0.1 at 0.0787.  (removed)
     A       X, Y, Z:  92.17  50.3  5.04
2.5  Seg length ending at pt. 1266 <= 0.1 at 0.0927.  (removed)
     A       X, Y, Z:  92.62  48.62  5.07
2.5  Seg length ending at pt. 1291 <= 0.1 at 0.05.  (removed)
     A       X, Y, Z:  93.62  46.74  5.13
2.5  Seg length ending at pt. 1293 <= 0.1 at 0.0922.  (removed)
     A       X, Y, Z:  93.51  46.65  5.13
2.5  Seg length ending at pt. 1303 <= 0.1 at 0.1.  (removed)
     A       X, Y, Z:  93.5  46.65  5.13
2.5  Seg length ending at pt. 1377 <= 0.1 at 0.0458.  (removed)
     A       X, Y, Z:  93.88  51.76  5.14
2.5  Seg length ending at pt. 1379 <= 0.1 at 0.099.  (removed)
     A       X, Y, Z:  93.81  51.81  5.27
2.5  Seg length ending at pt. 1292 <= 0.1 at 0.1.  (removed)
     A       X, Y, Z:  93.58  46.71  5.13
2.6  Line 1 and line 343 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  73.54  74.34  4.5
2.6  Line 1 and line 517 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  73.54  74.34  4.5
2.6  Line 343 and line 517 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  73.54  74.34  4.5
2.6  Line 1033 and line 1436 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  80.97  62.16  5.05
2.6  Line 1294 and line 1305 have the same coordinates.  (second line removed)
     A      X, Y, Z:  93.37  46.57  5.15
2.6  Line 1295 and line 1305 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  93.26  46.5  5.19
4.4  Line 15 of rad 1.02 links to 14 of rad 0.4.  (no action taken)
     B1      X, Y, Z:  71.29  76.49  4.64
4.4  Line 166 of rad 0.955 links to 14 of rad 0.4.  (no action taken)
     B1      X, Y, Z:  71.17  76.43  4.64
4.4  Line 343 of rad 9.0 links to 3 of rad 2.55.  (no action taken)
     B1      X, Y, Z:  73.54  74.34  4.5
4.4  Line 517 of rad 9.0 links to 2 of rad 2.55.  (no action taken)
     B1      X, Y, Z:  73.54  74.34  4.5
4.4  Line 532 of rad 0.454 links to 531 of rad 0.15.  (no action taken)
     B1      X, Y, Z:  71.74  72.09  4.39
4.4  Line 533 of rad 1.035 links to 532 of rad 0.454.  (no action taken)
     B1      X, Y, Z:  71.75  71.96  4.46
4.4  Line 601 of rad 0.878 links to 600 of rad 0.4.  (no action taken)
     B1      X, Y, Z:  69.98  74.74  4.5
4.4  Line 757 of rad 0.905 links to 600 of rad 0.4.  (no action taken)
     B1      X, Y, Z:  70.13  74.89  4.52
4.4  Line 987 of rad 0.4 links to 986 of rad 0.187.  (no action taken)
     B1      X, Y, Z:  81.34  62.04  4.92
2.1  Line 147 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  65.34  83.36  6.48
2.1  Line 220 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  64.06  86.05  3.91
2.1  Line 656 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  59.6  72.05  4.58
2.1  Line 834 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  58.8  75.86  3.92
2.1  Line 987 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  81.34  62.04  4.92
2.1  Line 1066 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  85.14  59.37  4.88
2.1  Line 1198 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  92.18  50.24  4.99
2.1  Line 1290 has 4 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  93.66  46.77  5.13
2.1  Line 1376 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  93.9  51.75  5.1
 
 


Number of type A irregularities = 20
Number of type B1 irregularities = 107
Number of type B2 irregularities = 0
Number of type C irregularities = 0
