# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\M14Neuron9Imaris.ims.swc.swc created with StdSwc version 1.31 on 12/11/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\M14Neuron9Imaris.ims.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  92.5  89.99  15.08
4.3  Radius of line 2 at 2.925 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  92.57  89.52  14.77
4.3  Radius of line 3 at 1.389 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  92.68  89.44  14.71
4.3  Radius of line 147 at 1.394 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  92.57  89.15  14.65
4.3  Radius of line 683 at 2.574 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  92.5  89.99  15.08
4.3  Radius of line 684 at 2.925 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  92.54  90.2  14.9
4.3  Radius of line 685 at 1.394 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  92.63  90.09  14.87
4.3  Radius of line 686 at 1.394 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  92.72  89.98  14.84
4.3  Radius of line 687 at 1.394 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  92.9  89.76  14.77
4.5  Radius of terminal line 1094 at 0.274 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  113.31  63.95  23.5
4.5  Radius of terminal line 1408 at 0.278 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  102.91  46.93  22.31
4.5  Radius of terminal line 1417 at 0.339 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  102.6  47.41  21.88
4.5  Radius of terminal line 1665 at 0.356 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  115.8  35.9  17.32
4.3  Radius of line 1670 at 1.389 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  92.41  89.97  14.8
4.3  Radius of line 1671 at 1.389 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  92.27  89.74  14.7
4.3  Radius of line 1754 at 1.389 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  92.6  90.61  14.79
4.3  Radius of line 1880 at 1.389 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  92.17  90.35  14.73
4.5  Radius of terminal line 2460 at 0.275 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  67.53  113.42  21.4
4.5  Radius of terminal line 3070 at 0.458 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  73.42  152.37  18.82
4.3  Radius of line 3789 at 0.655 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  65.54  184.55  11.09
4.3  Radius of line 3790 at 0.697 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  65.56  184.78  11.11
4.3  Radius of line 3791 at 0.709 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  65.56  185.02  11.13
4.3  Radius of line 3792 at 0.715 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  65.56  185.24  11.15
4.3  Radius of line 3793 at 0.722 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  65.54  185.47  11.16
4.3  Radius of line 3810 at 0.71 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  65.52  185.7  11.16
4.3  Radius of line 3811 at 0.687 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  65.49  185.93  11.15
4.3  Radius of line 3823 at 0.616 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  65.45  186.16  11.15
2.4  Seg length ending at pt. 2 >= 6.0 stdevs above mean at 0.5674.  (no action taken)
     B1      X, Y, Z:  92.57  89.52  14.77
2.5  Seg length ending at pt. 683 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  92.5  89.99  15.08
2.5  Seg length ending at pt. 898 <= 0.1 at 0.0574.  (removed)
     A       X, Y, Z:  100.41  79.81  18.43
2.5  Seg length ending at pt. 900 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  100.5  79.91  18.46
2.4  Seg length ending at pt. 1004 >= 6.0 stdevs above mean at 0.5385.  (no action taken)
     B1      X, Y, Z:  107.06  72.89  19.95
2.4  Seg length ending at pt. 1005 >= 6.0 stdevs above mean at 0.5394.  (no action taken)
     B1      X, Y, Z:  107.38  73.32  19.89
2.4  Seg length ending at pt. 1006 >= 6.0 stdevs above mean at 0.5414.  (no action taken)
     B1      X, Y, Z:  107.69  73.75  19.78
2.5  Seg length ending at pt. 1133 <= 0.1 at 0.064.  (removed)
     A       X, Y, Z:  109.99  64.5  15.97
2.5  Seg length ending at pt. 1495 <= 0.1 at 0.0922.  (removed)
     A       X, Y, Z:  110.57  55.28  15.57
2.5  Seg length ending at pt. 1645 <= 0.1 at 0.0648.  (removed)
     A       X, Y, Z:  115.3  36.12  17.33
2.4  Seg length ending at pt. 1754 >= 6.0 stdevs above mean at 0.6677.  (no action taken)
     B1      X, Y, Z:  92.6  90.61  14.79
2.4  Seg length ending at pt. 1880 >= 6.0 stdevs above mean at 0.5466.  (no action taken)
     B1      X, Y, Z:  92.17  90.35  14.73
2.5  Seg length ending at pt. 3072 <= 0.1 at 0.01.  (removed)
     A       X, Y, Z:  73.71  152.22  18.71
2.5  Seg length ending at pt. 3074 <= 0.1 at 0.01.  (removed)
     A       X, Y, Z:  73.7  152.23  18.71
2.5  Seg length ending at pt. 3076 <= 0.1 at 0.03.  (removed)
     A       X, Y, Z:  73.67  152.26  18.72
2.5  Seg length ending at pt. 4041 <= 0.1 at 0.0849.  (removed)
     A       X, Y, Z:  61.32  197.15  10.13
2.5  Seg length ending at pt. 4745 <= 0.1 at 0.0671.  (removed)
     A       X, Y, Z:  91.96  151.7  15.27
2.5  Seg length ending at pt. 5155 <= 0.1 at 0.0781.  (removed)
     A       X, Y, Z:  113.46  181.03  19.39
2.5  Seg length ending at pt. 5199 <= 0.1 at 0.0995.  (removed)
     A       X, Y, Z:  115.52  185.86  20.32
2.5  Seg length ending at pt. 5259 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  119.38  192.09  21.39
2.5  Seg length ending at pt. 5261 <= 0.1 at 0.0141.  (removed)
     A       X, Y, Z:  119.39  192.1  21.39
2.5  Seg length ending at pt. 5263 <= 0.1 at 0.0412.  (removed)
     A       X, Y, Z:  119.43  192.13  21.42
2.4  Seg length ending at pt. 5358 >= 6.0 stdevs above mean at 0.5507.  (no action taken)
     B1      X, Y, Z:  109.54  174.1  18.01
2.5  Seg length ending at pt. 5412 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  117.71  173.16  15.83
2.5  Seg length ending at pt. 5414 <= 0.1 at 0.01.  (removed)
     A       X, Y, Z:  117.71  173.17  15.83
2.5  Seg length ending at pt. 5416 <= 0.1 at 0.0173.  (removed)
     A       X, Y, Z:  117.72  173.19  15.81
2.5  Seg length ending at pt. 5418 <= 0.1 at 0.0831.  (removed)
     A       X, Y, Z:  117.75  173.29  15.75
2.5  Seg length ending at pt. 5504 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  120.31  174.92  15.86
2.5  Seg length ending at pt. 5506 <= 0.1 at 0.01.  (removed)
     A       X, Y, Z:  120.31  174.91  15.86
2.5  Seg length ending at pt. 5508 <= 0.1 at 0.0141.  (removed)
     A       X, Y, Z:  120.33  174.9  15.87
2.5  Seg length ending at pt. 5510 <= 0.1 at 0.0458.  (removed)
     A       X, Y, Z:  120.38  174.87  15.88
2.5  Seg length ending at pt. 6386 <= 0.1 at 0.0539.  (removed)
     A       X, Y, Z:  125.0  193.4  14.29
2.5  Seg length ending at pt. 6388 <= 0.1 at 0.0995.  (removed)
     A       X, Y, Z:  125.1  193.33  14.37
2.5  Seg length ending at pt. 6481 <= 0.1 at 0.0245.  (removed)
     A       X, Y, Z:  127.1  197.06  14.54
2.5  Seg length ending at pt. 6483 <= 0.1 at 0.051.  (removed)
     A       X, Y, Z:  127.12  197.1  14.6
2.5  Seg length ending at pt. 6587 <= 0.1 at 0.0812.  (removed)
     A       X, Y, Z:  127.97  198.94  14.7
2.5  Seg length ending at pt. 6643 <= 0.1 at 0.099.  (removed)
     A       X, Y, Z:  128.79  200.2  14.51
2.5  Seg length ending at pt. 6803 <= 0.1 at 0.097.  (removed)
     A       X, Y, Z:  131.64  205.32  14.56
2.5  Seg length ending at pt. 1134 <= 0.1 at 0.0224.  (removed)
     A       X, Y, Z:  109.99  64.56  15.99
2.5  Seg length ending at pt. 3073 <= 0.1 at 0.0141.  (removed)
     A       X, Y, Z:  73.7  152.22  18.71
2.5  Seg length ending at pt. 3077 <= 0.1 at 0.0837.  (removed)
     A       X, Y, Z:  73.64  152.3  18.74
2.5  Seg length ending at pt. 5260 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  119.38  192.09  21.39
2.5  Seg length ending at pt. 5413 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  117.71  173.16  15.83
2.5  Seg length ending at pt. 5417 <= 0.1 at 0.0539.  (removed)
     A       X, Y, Z:  117.73  173.22  15.79
2.5  Seg length ending at pt. 5505 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  120.31  174.92  15.86
2.5  Seg length ending at pt. 5509 <= 0.1 at 0.0283.  (removed)
     A       X, Y, Z:  120.34  174.89  15.87
2.5  Seg length ending at pt. 6387 <= 0.1 at 0.0995.  (removed)
     A       X, Y, Z:  125.03  193.38  14.32
2.5  Seg length ending at pt. 6482 <= 0.1 at 0.049.  (removed)
     A       X, Y, Z:  127.11  197.07  14.56
2.5  Seg length ending at pt. 3075 <= 0.1 at 0.03.  (removed)
     A       X, Y, Z:  73.69  152.24  18.71
2.5  Seg length ending at pt. 5262 <= 0.1 at 0.03.  (removed)
     A       X, Y, Z:  119.4  192.11  21.4
2.5  Seg length ending at pt. 5415 <= 0.1 at 0.0224.  (removed)
     A       X, Y, Z:  117.71  173.18  15.82
2.5  Seg length ending at pt. 5507 <= 0.1 at 0.0173.  (removed)
     A       X, Y, Z:  120.32  174.91  15.87
2.7  Line 1665 of rad 0.356 is an included side branch.  (removed)
     A      X, Y, Z:  115.8  35.9  17.32
2.7  Line 2460 of rad 0.275 is an included side branch.  (removed)
     A      X, Y, Z:  67.53  113.42  21.4
2.7  Line 3070 of rad 0.458 is an included side branch.  (removed)
     A      X, Y, Z:  73.42  152.37  18.82
2.6  Line 3068 and line 3071 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  73.71  152.22  18.7
2.6  Line 3085 and line 3107 have the same coordinates.  (second line removed)
     A      X, Y, Z:  73.59  152.63  18.76
2.6  Line 3086 and line 3107 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  73.57  152.89  18.78
2.6  Line 3087 and line 3108 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  73.57  153.11  18.8
2.6  Line 3088 and line 3109 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  73.58  153.33  18.83
2.6  Line 5428 and line 5475 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  117.7  172.78  15.58
2.6  Line 5430 and line 5477 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  117.47  172.3  15.56
2.6  Line 5431 and line 5478 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  117.37  172.07  15.52
2.6  Line 5514 and line 5539 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  120.51  174.65  15.87
2.6  Line 5529 and line 5552 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  120.62  174.37  15.86
2.6  Line 5535 and line 5602 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  120.75  172.79  16.04
2.6  Line 5545 and line 5557 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  120.77  173.15  15.98
4.4  Line 5033 of rad 0.4 links to 5032 of rad 0.188.  (no action taken)
     B1      X, Y, Z:  109.14  173.73  17.93
2.1  Line 897 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  100.37  79.77  18.42
2.1  Line 899 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  100.44  79.84  18.44
2.1  Line 1494 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  110.64  55.34  15.57
2.1  Line 1644 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  115.25  36.16  17.32
2.1  Line 3071 has 7 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  73.71  152.22  18.7
2.1  Line 4040 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  61.32  197.09  10.07
2.1  Line 4744 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  92.0  151.65  15.25
2.1  Line 5258 has 7 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  119.38  192.09  21.39
2.1  Line 5411 has 9 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  117.71  173.16  15.83
2.1  Line 5503 has 9 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  120.31  174.92  15.86
2.1  Line 6385 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  124.96  193.43  14.27
2.1  Line 6480 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  127.09  197.05  14.52
2.1  Line 6586 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  128.04  198.95  14.66
2.1  Line 6642 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  128.72  200.2  14.58
2.1  Line 6802 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  131.66  205.23  14.59
 
 


Number of type A irregularities = 49
Number of type B1 irregularities = 61
Number of type B2 irregularities = 0
Number of type C irregularities = 0
