# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\M14Neuron7Imaris.ims.swc.swc created with StdSwc version 1.31 on 12/11/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\M14Neuron7Imaris.ims.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  180.05  210.12  23.15
4.3  Radius of line 2 at 5.565 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  179.98  210.24  23.27
4.3  Radius of line 3 at 5.565 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  179.92  210.36  23.39
4.3  Radius of line 4 at 5.565 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  179.78  210.6  23.62
4.3  Radius of line 5 at 5.565 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  179.5  211.09  24.08
4.3  Radius of line 189 at 12.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  180.05  210.12  23.15
4.3  Radius of line 190 at 3.3 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  180.98  209.84  23.23
4.3  Radius of line 537 at 12.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  180.05  210.12  23.15
4.3  Radius of line 538 at 5.454 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  179.87  211.06  24.04
4.5  Radius of terminal line 1775 at 1.007 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  144.39  246.84  33.07
4.5  Radius of terminal line 1892 at 0.751 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  135.08  253.91  36.72
4.5  Radius of terminal line 2004 at 1.004 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  126.64  263.76  39.57
4.5  Radius of terminal line 2028 at 0.79 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.08  266.73  39.7
4.5  Radius of terminal line 2114 at 0.7 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  118.68  271.97  43.78
4.5  Radius of terminal line 2152 at 0.846 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  117.07  271.7  43.31
4.3  Radius of line 2803 at 12.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  180.05  210.12  23.15
4.3  Radius of line 2804 at 5.568 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  178.91  209.99  22.89
4.3  Radius of line 3160 at 12.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  180.05  210.12  23.15
4.3  Radius of line 3161 at 3.3 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  180.13  210.66  23.81
2.5  Seg length ending at pt. 152 <= 0.1 at 0.0283.  (removed)
     A       X, Y, Z:  145.38  200.55  43.86
2.5  Seg length ending at pt. 154 <= 0.1 at 0.0361.  (removed)
     A       X, Y, Z:  145.41  200.55  43.82
2.4  Seg length ending at pt. 538 >= 6.0 stdevs above mean at 1.3069.  (no action taken)
     B1      X, Y, Z:  179.87  211.06  24.04
2.5  Seg length ending at pt. 638 <= 0.1 at 0.0548.  (removed)
     A       X, Y, Z:  184.94  212.95  41.48
2.5  Seg length ending at pt. 856 <= 0.1 at 0.0374.  (removed)
     A       X, Y, Z:  217.7  232.11  40.26
2.5  Seg length ending at pt. 858 <= 0.1 at 0.0949.  (removed)
     A       X, Y, Z:  217.82  232.13  40.34
2.5  Seg length ending at pt. 1366 <= 0.1 at 0.0374.  (removed)
     A       X, Y, Z:  147.51  214.71  24.1
2.5  Seg length ending at pt. 1805 <= 0.1 at 0.0592.  (removed)
     A       X, Y, Z:  138.74  250.35  35.58
2.5  Seg length ending at pt. 1905 <= 0.1 at 0.0436.  (removed)
     A       X, Y, Z:  135.17  255.86  37.61
2.5  Seg length ending at pt. 1907 <= 0.1 at 0.0938.  (removed)
     A       X, Y, Z:  135.11  255.78  37.52
2.5  Seg length ending at pt. 1916 <= 0.1 at 0.0927.  (removed)
     A       X, Y, Z:  134.97  255.75  37.4
2.4  Seg length ending at pt. 1921 >= 6.0 stdevs above mean at 3.5178.  (no action taken)
     B1      X, Y, Z:  134.95  255.81  37.46
2.5  Seg length ending at pt. 2400 <= 0.1 at 0.0755.  (removed)
     A       X, Y, Z:  95.23  281.05  42.64
2.5  Seg length ending at pt. 2615 <= 0.1 at 0.0806.  (removed)
     A       X, Y, Z:  147.66  274.38  29.92
2.4  Seg length ending at pt. 2804 >= 6.0 stdevs above mean at 1.1765.  (no action taken)
     B1      X, Y, Z:  178.91  209.99  22.89
2.5  Seg length ending at pt. 3160 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  180.05  210.12  23.15
2.5  Seg length ending at pt. 3199 <= 0.1 at 0.0985.  (removed)
     A       X, Y, Z:  194.37  203.16  20.91
2.4  Seg length ending at pt. 4391 >= 6.0 stdevs above mean at 1.2141.  (no action taken)
     B1      X, Y, Z:  179.78  211.56  23.29
2.5  Seg length ending at pt. 153 <= 0.1 at 0.0424.  (removed)
     A       X, Y, Z:  145.39  200.55  43.85
2.5  Seg length ending at pt. 857 <= 0.1 at 0.0883.  (removed)
     A       X, Y, Z:  217.74  232.12  40.29
2.5  Seg length ending at pt. 1367 <= 0.1 at 0.0671.  (removed)
     A       X, Y, Z:  147.53  214.7  24.12
2.5  Seg length ending at pt. 1906 <= 0.1 at 0.0837.  (removed)
     A       X, Y, Z:  135.15  255.84  37.58
2.6  Line 1 and line 189 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  180.05  210.12  23.15
2.6  Line 1 and line 537 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  180.05  210.12  23.15
2.6  Line 1 and line 2803 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  180.05  210.12  23.15
2.6  Line 189 and line 537 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  180.05  210.12  23.15
2.6  Line 189 and line 2803 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  180.05  210.12  23.15
2.6  Line 537 and line 2803 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  180.05  210.12  23.15
2.6  Line 4376 and line 4381 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  239.71  163.38  37.72
4.4  Line 189 of rad 12.0 links to 4 of rad 5.565.  (no action taken)
     B1      X, Y, Z:  180.05  210.12  23.15
4.4  Line 537 of rad 12.0 links to 3 of rad 5.565.  (no action taken)
     B1      X, Y, Z:  180.05  210.12  23.15
4.4  Line 1834 of rad 1.119 links to 1833 of rad 0.4.  (no action taken)
     B1      X, Y, Z:  136.5  254.06  36.88
4.4  Line 1888 of rad 0.953 links to 1833 of rad 0.4.  (no action taken)
     B1      X, Y, Z:  136.47  254.11  36.85
4.4  Line 1921 of rad 0.751 links to 1915 of rad 0.234.  (no action taken)
     B1      X, Y, Z:  134.95  255.81  37.46
4.4  Line 2522 of rad 0.949 links to 1794 of rad 0.4.  (no action taken)
     B1      X, Y, Z:  140.81  249.07  34.81
4.4  Line 2803 of rad 12.0 links to 2 of rad 5.565.  (no action taken)
     B1      X, Y, Z:  180.05  210.12  23.15
2.1  Line 151 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  145.36  200.55  43.88
2.1  Line 637 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  184.89  212.96  41.5
2.1  Line 855 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  217.67  232.1  40.24
2.1  Line 1365 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  147.49  214.72  24.07
2.1  Line 1804 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  138.77  250.3  35.57
2.1  Line 1904 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  135.18  255.89  37.64
2.1  Line 2399 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  95.28  281.09  42.6
 
 


Number of type A irregularities = 18
Number of type B1 irregularities = 44
Number of type B2 irregularities = 0
Number of type C irregularities = 0
