# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\M13Neuron6Imaris.ims.swc.swc created with StdSwc version 1.31 on 12/11/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\M13Neuron6Imaris.ims.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  85.4  105.26  5.32
4.3  Radius of line 2 at 2.55 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  85.33  104.99  5.26
4.3  Radius of line 3 at 2.55 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  85.26  104.73  5.2
4.3  Radius of line 368 at 9.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  85.4  105.26  5.32
4.3  Radius of line 369 at 2.55 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  85.26  105.61  5.25
4.3  Radius of line 1801 at 9.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  85.4  105.26  5.32
4.3  Radius of line 1802 at 3.54 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  85.15  105.41  5.26
4.5  Radius of terminal line 2386 at 0.362 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  33.17  90.68  3.72
2.5  Seg length ending at pt. 232 <= 0.1 at 0.0714.  (removed)
     A       X, Y, Z:  81.27  86.03  3.88
2.5  Seg length ending at pt. 362 <= 0.1 at 0.0949.  (removed)
     A       X, Y, Z:  84.23  73.41  4.16
2.5  Seg length ending at pt. 739 <= 0.1 at 0.0831.  (removed)
     A       X, Y, Z:  91.77  124.45  6.17
2.5  Seg length ending at pt. 850 <= 0.1 at 0.0922.  (removed)
     A       X, Y, Z:  93.59  129.42  8.75
2.5  Seg length ending at pt. 860 <= 0.1 at 0.0548.  (removed)
     A       X, Y, Z:  94.0  130.13  6.83
2.5  Seg length ending at pt. 929 <= 0.1 at 0.09.  (removed)
     A       X, Y, Z:  94.3  130.8  6.9
2.5  Seg length ending at pt. 962 <= 0.1 at 0.0911.  (removed)
     A       X, Y, Z:  94.45  131.05  7.01
2.5  Seg length ending at pt. 964 <= 0.1 at 0.0911.  (removed)
     A       X, Y, Z:  94.44  131.07  7.19
2.5  Seg length ending at pt. 966 <= 0.1 at 0.099.  (removed)
     A       X, Y, Z:  94.38  131.1  7.37
2.5  Seg length ending at pt. 987 <= 0.1 at 0.0714.  (removed)
     A       X, Y, Z:  94.98  132.31  6.65
2.5  Seg length ending at pt. 1188 <= 0.1 at 0.0949.  (removed)
     A       X, Y, Z:  101.36  142.86  6.8
2.5  Seg length ending at pt. 1229 <= 0.1 at 0.0374.  (removed)
     A       X, Y, Z:  103.2  143.72  6.85
2.5  Seg length ending at pt. 1231 <= 0.1 at 0.0735.  (removed)
     A       X, Y, Z:  103.25  143.63  6.8
2.5  Seg length ending at pt. 1304 <= 0.1 at 0.0831.  (removed)
     A       X, Y, Z:  107.57  145.17  6.41
2.5  Seg length ending at pt. 1333 <= 0.1 at 0.0819.  (removed)
     A       X, Y, Z:  107.9  145.44  6.56
2.5  Seg length ending at pt. 1409 <= 0.1 at 0.0812.  (removed)
     A       X, Y, Z:  111.02  146.8  6.03
2.5  Seg length ending at pt. 1440 <= 0.1 at 0.0224.  (removed)
     A       X, Y, Z:  111.51  146.97  5.75
2.5  Seg length ending at pt. 1442 <= 0.1 at 0.0424.  (removed)
     A       X, Y, Z:  111.51  147.01  5.8
2.5  Seg length ending at pt. 1560 <= 0.1 at 0.0714.  (removed)
     A       X, Y, Z:  121.9  150.79  4.65
2.5  Seg length ending at pt. 1562 <= 0.1 at 0.0781.  (removed)
     A       X, Y, Z:  122.02  150.87  4.66
2.5  Seg length ending at pt. 1801 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  85.4  105.26  5.32
2.5  Seg length ending at pt. 2032 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  68.87  83.05  4.59
2.5  Seg length ending at pt. 2322 <= 0.1 at 0.0837.  (removed)
     A       X, Y, Z:  41.02  97.1  3.99
2.5  Seg length ending at pt. 1230 <= 0.1 at 0.0781.  (removed)
     A       X, Y, Z:  103.22  143.69  6.83
2.5  Seg length ending at pt. 1441 <= 0.1 at 0.0447.  (removed)
     A       X, Y, Z:  111.51  146.98  5.77
2.6  Line 1 and line 368 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  85.4  105.26  5.32
2.6  Line 875 and line 894 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  93.93  130.1  6.97
4.4  Line 211 of rad 0.4 links to 210 of rad 0.187.  (no action taken)
     B1      X, Y, Z:  83.48  87.49  3.78
4.4  Line 368 of rad 9.0 links to 2 of rad 2.55.  (no action taken)
     B1      X, Y, Z:  85.4  105.26  5.32
4.4  Line 446 of rad 0.4 links to 445 of rad 0.187.  (no action taken)
     B1      X, Y, Z:  93.0  121.32  3.56
4.4  Line 1276 of rad 0.4 links to 1272 of rad 0.144.  (no action taken)
     B1      X, Y, Z:  106.28  144.73  6.25
4.4  Line 1821 of rad 0.4 links to 1820 of rad 0.187.  (no action taken)
     B1      X, Y, Z:  82.25  102.1  4.98
2.1  Line 231 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  81.32  85.98  3.89
2.1  Line 738 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  91.78  124.43  6.09
2.1  Line 859 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  94.02  130.14  6.78
2.1  Line 928 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  94.3  130.8  6.81
2.1  Line 986 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  95.03  132.3  6.7
2.1  Line 1187 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  101.28  142.91  6.81
2.1  Line 1228 has 4 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  103.19  143.75  6.87
2.1  Line 1303 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  107.59  145.21  6.34
2.1  Line 1332 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  107.93  145.47  6.49
2.1  Line 1408 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  111.01  146.87  5.99
2.1  Line 1439 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  111.51  146.96  5.73
 
 


Number of type A irregularities = 25
Number of type B1 irregularities = 26
Number of type B2 irregularities = 0
Number of type C irregularities = 0
