# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\M12Neuron6Imaris.ims.swc.swc created with StdSwc version 1.31 on 12/11/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\M12Neuron6Imaris.ims.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  182.35  104.84  13.68
4.3  Radius of line 2 at 5.136 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  182.3  104.9  13.7
4.3  Radius of line 3 at 5.136 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  182.25  104.95  13.71
4.3  Radius of line 4 at 5.136 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  182.15  105.06  13.75
4.3  Radius of line 5 at 5.136 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  181.94  105.28  13.82
4.3  Radius of line 432 at 10.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  182.35  104.84  13.68
4.3  Radius of line 433 at 5.136 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  181.73  105.1  13.83
4.5  Radius of terminal line 676 at 0.22 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  160.12  86.81  13.01
4.5  Radius of terminal line 1410 at 0.266 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  154.73  36.61  16.49
4.3  Radius of line 1436 at 10.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  182.35  104.84  13.68
4.3  Radius of line 1437 at 5.136 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  182.77  105.25  13.82
4.3  Radius of line 2326 at 10.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  182.35  104.84  13.68
4.3  Radius of line 2327 at 5.147 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  181.93  105.22  13.82
4.3  Radius of line 3187 at 10.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  182.35  104.84  13.68
4.3  Radius of line 3188 at 5.185 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  182.22  105.3  13.8
2.5  Seg length ending at pt. 2 <= 0.1 at 0.0806.  (removed)
     A       X, Y, Z:  182.3  104.9  13.7
2.5  Seg length ending at pt. 103 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  178.86  120.67  16.52
2.5  Seg length ending at pt. 105 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  178.86  120.67  16.52
2.5  Seg length ending at pt. 107 <= 0.1 at 0.01.  (removed)
     A       X, Y, Z:  178.86  120.67  16.53
2.5  Seg length ending at pt. 109 <= 0.1 at 0.0374.  (removed)
     A       X, Y, Z:  178.85  120.64  16.58
2.5  Seg length ending at pt. 182 <= 0.1 at 0.0224.  (removed)
     A       X, Y, Z:  178.59  121.47  15.83
2.5  Seg length ending at pt. 184 <= 0.1 at 0.0424.  (removed)
     A       X, Y, Z:  178.57  121.49  15.78
2.5  Seg length ending at pt. 224 <= 0.1 at 0.0374.  (removed)
     A       X, Y, Z:  178.5  122.1  15.62
2.5  Seg length ending at pt. 226 <= 0.1 at 0.0819.  (removed)
     A       X, Y, Z:  178.46  122.05  15.52
2.5  Seg length ending at pt. 279 <= 0.1 at 0.0224.  (removed)
     A       X, Y, Z:  177.28  126.0  14.23
2.5  Seg length ending at pt. 281 <= 0.1 at 0.0424.  (removed)
     A       X, Y, Z:  177.22  125.98  14.21
2.5  Seg length ending at pt. 321 <= 0.1 at 0.0787.  (removed)
     A       X, Y, Z:  177.2  126.92  14.11
2.4  Seg length ending at pt. 433 >= 6.0 stdevs above mean at 0.6888.  (no action taken)
     B1      X, Y, Z:  181.73  105.1  13.83
2.5  Seg length ending at pt. 1133 <= 0.1 at 0.0806.  (removed)
     A       X, Y, Z:  154.04  50.35  16.04
2.5  Seg length ending at pt. 1210 <= 0.1 at 0.0762.  (removed)
     A       X, Y, Z:  154.3  46.34  16.76
2.5  Seg length ending at pt. 1266 <= 0.1 at 0.09.  (removed)
     A       X, Y, Z:  154.62  43.87  15.87
2.5  Seg length ending at pt. 1384 <= 0.1 at 0.0812.  (removed)
     A       X, Y, Z:  154.66  37.95  16.58
2.4  Seg length ending at pt. 1437 >= 6.0 stdevs above mean at 0.6034.  (no action taken)
     B1      X, Y, Z:  182.77  105.25  13.82
2.5  Seg length ending at pt. 1492 <= 0.1 at 0.051.  (removed)
     A       X, Y, Z:  188.86  102.88  13.94
2.5  Seg length ending at pt. 1494 <= 0.1 at 0.0883.  (removed)
     A       X, Y, Z:  188.75  102.8  13.96
2.5  Seg length ending at pt. 1686 <= 0.1 at 0.0574.  (removed)
     A       X, Y, Z:  200.17  106.6  14.82
2.5  Seg length ending at pt. 1733 <= 0.1 at 0.0707.  (removed)
     A       X, Y, Z:  201.17  107.2  15.09
2.5  Seg length ending at pt. 2174 <= 0.1 at 0.0938.  (removed)
     A       X, Y, Z:  223.43  118.44  11.35
2.5  Seg length ending at pt. 2326 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  182.35  104.84  13.68
2.4  Seg length ending at pt. 2327 >= 6.0 stdevs above mean at 0.5834.  (no action taken)
     B1      X, Y, Z:  181.93  105.22  13.82
2.5  Seg length ending at pt. 2489 <= 0.1 at 0.0787.  (removed)
     A       X, Y, Z:  170.12  107.25  16.73
2.5  Seg length ending at pt. 2557 <= 0.1 at 0.0714.  (removed)
     A       X, Y, Z:  166.48  112.07  17.07
2.5  Seg length ending at pt. 2593 <= 0.1 at 0.03.  (removed)
     A       X, Y, Z:  165.66  113.27  17.93
2.5  Seg length ending at pt. 2595 <= 0.1 at 0.0781.  (removed)
     A       X, Y, Z:  165.61  113.31  17.84
2.5  Seg length ending at pt. 2741 <= 0.1 at 0.0872.  (removed)
     A       X, Y, Z:  156.41  101.97  13.4
2.5  Seg length ending at pt. 2774 <= 0.1 at 0.0849.  (removed)
     A       X, Y, Z:  155.92  103.93  14.18
2.5  Seg length ending at pt. 3187 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  182.35  104.84  13.68
2.5  Seg length ending at pt. 104 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  178.86  120.67  16.52
2.5  Seg length ending at pt. 108 <= 0.1 at 0.0316.  (removed)
     A       X, Y, Z:  178.86  120.66  16.55
2.5  Seg length ending at pt. 183 <= 0.1 at 0.0374.  (removed)
     A       X, Y, Z:  178.58  121.48  15.82
2.5  Seg length ending at pt. 225 <= 0.1 at 0.0748.  (removed)
     A       X, Y, Z:  178.49  122.08  15.59
2.5  Seg length ending at pt. 280 <= 0.1 at 0.0458.  (removed)
     A       X, Y, Z:  177.26  125.99  14.22
2.5  Seg length ending at pt. 2594 <= 0.1 at 0.0616.  (removed)
     A       X, Y, Z:  165.65  113.28  17.9
2.5  Seg length ending at pt. 106 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  178.86  120.67  16.52
2.6  Line 1 and line 432 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  182.35  104.84  13.68
2.6  Line 1 and line 1436 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  182.35  104.84  13.68
2.6  Line 432 and line 1436 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  182.35  104.84  13.68
2.1  Line 1 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  182.35  104.84  13.68
2.1  Line 102 has 9 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  178.86  120.67  16.52
2.1  Line 181 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  178.6  121.47  15.85
2.1  Line 223 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  178.51  122.12  15.65
2.1  Line 278 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  177.3  126.0  14.24
2.1  Line 320 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  177.13  126.89  14.09
2.1  Line 1132 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  154.04  50.36  15.96
2.1  Line 1265 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  154.54  43.86  15.91
2.1  Line 1383 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  154.74  37.96  16.59
2.1  Line 1491 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  188.9  102.91  13.93
2.1  Line 1493 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  188.82  102.85  13.94
2.1  Line 1685 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  200.15  106.62  14.77
2.1  Line 1732 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  201.2  107.16  15.04
2.1  Line 2173 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  223.49  118.4  11.29
2.1  Line 2488 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  170.17  107.26  16.79
2.1  Line 2592 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  165.68  113.26  17.95
2.1  Line 2740 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  156.35  101.91  13.38
2.1  Line 2773 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  155.86  103.87  14.18
 
 


Number of type A irregularities = 36
Number of type B1 irregularities = 39
Number of type B2 irregularities = 0
Number of type C irregularities = 0
