# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\M12Neuron4Imaris.ims.swc.swc created with StdSwc version 1.31 on 12/11/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\M12Neuron4Imaris.ims.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  101.01  103.87  4.85
4.3  Radius of line 2 at 4.599 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  101.01  103.84  4.85
4.3  Radius of line 3 at 4.599 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  101.0  103.81  4.86
4.3  Radius of line 4 at 4.599 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  100.98  103.76  4.87
4.3  Radius of line 5 at 4.599 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  100.94  103.66  4.9
4.3  Radius of line 6 at 4.599 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  100.87  103.45  4.94
4.3  Radius of line 255 at 9.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  101.01  103.87  4.85
4.3  Radius of line 256 at 4.599 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  101.51  103.74  4.98
4.3  Radius of line 475 at 9.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  101.01  103.87  4.85
4.3  Radius of line 476 at 4.599 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  100.49  104.11  4.95
4.3  Radius of line 787 at 9.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  101.01  103.87  4.85
4.3  Radius of line 788 at 4.599 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  101.4  104.08  4.99
4.3  Radius of line 1575 at 9.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  101.01  103.87  4.85
4.3  Radius of line 1576 at 2.55 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  100.75  103.38  4.94
4.3  Radius of line 3537 at 9.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  101.01  103.87  4.85
4.3  Radius of line 3538 at 4.599 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  101.0  104.1  4.95
4.5  Radius of terminal line 5424 at 0.22 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  100.0  117.06  5.89
4.5  Radius of terminal line 5448 at 0.22 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  100.18  118.76  6.13
2.5  Seg length ending at pt. 2 <= 0.1 at 0.03.  (removed)
     A       X, Y, Z:  101.01  103.84  4.85
2.5  Seg length ending at pt. 4 <= 0.1 at 0.0548.  (removed)
     A       X, Y, Z:  100.98  103.76  4.87
2.5  Seg length ending at pt. 38 <= 0.1 at 0.052.  (removed)
     A       X, Y, Z:  99.0  96.5  4.87
2.5  Seg length ending at pt. 45 <= 0.1 at 0.086.  (removed)
     A       X, Y, Z:  99.77  96.33  4.93
2.5  Seg length ending at pt. 85 <= 0.1 at 0.0985.  (removed)
     A       X, Y, Z:  99.73  96.35  4.92
2.5  Seg length ending at pt. 87 <= 0.1 at 0.0927.  (removed)
     A       X, Y, Z:  99.9  96.3  4.94
2.5  Seg length ending at pt. 187 <= 0.1 at 0.0728.  (removed)
     A       X, Y, Z:  98.13  89.96  5.37
2.4  Seg length ending at pt. 256 >= 6.0 stdevs above mean at 0.5327.  (no action taken)
     B1      X, Y, Z:  101.51  103.74  4.98
2.5  Seg length ending at pt. 475 <= 0.1 at 0.0616.  (removed)
     A       X, Y, Z:  101.01  103.87  4.85
2.4  Seg length ending at pt. 476 >= 6.0 stdevs above mean at 0.5985.  (no action taken)
     B1      X, Y, Z:  100.49  104.11  4.95
2.5  Seg length ending at pt. 502 <= 0.1 at 0.099.  (removed)
     A       X, Y, Z:  96.46  108.38  4.82
2.5  Seg length ending at pt. 583 <= 0.1 at 0.0964.  (removed)
     A       X, Y, Z:  96.35  110.7  6.02
2.5  Seg length ending at pt. 659 <= 0.1 at 0.049.  (removed)
     A       X, Y, Z:  89.74  116.45  4.72
2.5  Seg length ending at pt. 661 <= 0.1 at 0.0964.  (removed)
     A       X, Y, Z:  89.82  116.48  4.6
2.5  Seg length ending at pt. 717 <= 0.1 at 0.0911.  (removed)
     A       X, Y, Z:  87.86  117.39  3.98
2.5  Seg length ending at pt. 787 <= 0.1 at 0.0616.  (removed)
     A       X, Y, Z:  101.01  103.87  4.85
2.4  Seg length ending at pt. 788 >= 6.0 stdevs above mean at 0.4998.  (no action taken)
     B1      X, Y, Z:  101.4  104.08  4.99
2.5  Seg length ending at pt. 951 <= 0.1 at 0.099.  (removed)
     A       X, Y, Z:  109.87  111.47  4.95
2.5  Seg length ending at pt. 960 <= 0.1 at 0.0917.  (removed)
     A       X, Y, Z:  110.34  111.87  4.91
2.5  Seg length ending at pt. 963 <= 0.1 at 0.09.  (removed)
     A       X, Y, Z:  110.35  111.87  4.85
2.5  Seg length ending at pt. 1001 <= 0.1 at 0.086.  (removed)
     A       X, Y, Z:  113.95  112.54  5.03
2.5  Seg length ending at pt. 1141 <= 0.1 at 0.052.  (removed)
     A       X, Y, Z:  124.51  115.55  4.62
2.5  Seg length ending at pt. 1152 <= 0.1 at 0.0922.  (removed)
     A       X, Y, Z:  124.5  115.58  4.47
2.5  Seg length ending at pt. 1198 <= 0.1 at 0.0949.  (removed)
     A       X, Y, Z:  126.64  116.57  3.99
2.5  Seg length ending at pt. 1575 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  101.01  103.87  4.85
2.4  Seg length ending at pt. 1576 >= 6.0 stdevs above mean at 0.562.  (no action taken)
     B1      X, Y, Z:  100.75  103.38  4.94
2.5  Seg length ending at pt. 2001 <= 0.1 at 0.0927.  (removed)
     A       X, Y, Z:  89.75  97.74  4.28
2.5  Seg length ending at pt. 2050 <= 0.1 at 0.099.  (removed)
     A       X, Y, Z:  87.82  96.79  4.17
2.5  Seg length ending at pt. 2074 <= 0.1 at 0.0458.  (removed)
     A       X, Y, Z:  83.67  96.78  3.91
2.5  Seg length ending at pt. 2076 <= 0.1 at 0.097.  (removed)
     A       X, Y, Z:  83.64  96.83  4.04
2.5  Seg length ending at pt. 2164 <= 0.1 at 0.0762.  (removed)
     A       X, Y, Z:  75.9  94.98  3.74
2.5  Seg length ending at pt. 2265 <= 0.1 at 0.0995.  (removed)
     A       X, Y, Z:  67.69  99.71  3.93
2.5  Seg length ending at pt. 2377 <= 0.1 at 0.0854.  (removed)
     A       X, Y, Z:  65.91  107.23  4.34
2.5  Seg length ending at pt. 3026 <= 0.1 at 0.0141.  (removed)
     A       X, Y, Z:  47.56  65.42  3.8
2.5  Seg length ending at pt. 3028 <= 0.1 at 0.0224.  (removed)
     A       X, Y, Z:  47.55  65.44  3.83
2.5  Seg length ending at pt. 3030 <= 0.1 at 0.0964.  (removed)
     A       X, Y, Z:  47.52  65.52  3.94
2.5  Seg length ending at pt. 3043 <= 0.1 at 0.0938.  (removed)
     A       X, Y, Z:  47.48  65.51  3.92
2.5  Seg length ending at pt. 3389 <= 0.1 at 0.097.  (removed)
     A       X, Y, Z:  62.29  55.56  5.11
2.5  Seg length ending at pt. 3406 <= 0.1 at 0.0458.  (removed)
     A       X, Y, Z:  62.35  53.74  5.95
2.5  Seg length ending at pt. 3408 <= 0.1 at 0.0877.  (removed)
     A       X, Y, Z:  62.23  53.69  5.92
2.5  Seg length ending at pt. 3419 <= 0.1 at 0.0592.  (removed)
     A       X, Y, Z:  62.26  53.71  5.91
2.5  Seg length ending at pt. 3537 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  101.01  103.87  4.85
2.5  Seg length ending at pt. 3586 <= 0.1 at 0.0995.  (removed)
     A       X, Y, Z:  100.35  110.14  5.77
2.5  Seg length ending at pt. 3615 <= 0.1 at 0.0245.  (removed)
     A       X, Y, Z:  100.94  113.95  6.13
2.5  Seg length ending at pt. 3617 <= 0.1 at 0.0424.  (removed)
     A       X, Y, Z:  100.95  113.96  6.08
2.5  Seg length ending at pt. 3683 <= 0.1 at 0.0866.  (removed)
     A       X, Y, Z:  100.44  114.63  5.87
2.5  Seg length ending at pt. 3708 <= 0.1 at 0.0877.  (removed)
     A       X, Y, Z:  99.65  115.91  6.17
2.5  Seg length ending at pt. 3904 <= 0.1 at 0.06.  (removed)
     A       X, Y, Z:  97.96  150.37  4.39
2.5  Seg length ending at pt. 3919 <= 0.1 at 0.0938.  (removed)
     A       X, Y, Z:  97.88  150.28  4.48
2.5  Seg length ending at pt. 3996 <= 0.1 at 0.05.  (removed)
     A       X, Y, Z:  99.38  154.48  4.49
2.5  Seg length ending at pt. 4006 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  99.31  154.44  4.62
2.5  Seg length ending at pt. 4049 <= 0.1 at 0.0583.  (removed)
     A       X, Y, Z:  99.68  154.77  4.5
2.5  Seg length ending at pt. 4091 <= 0.1 at 0.0539.  (removed)
     A       X, Y, Z:  100.77  156.23  4.47
2.5  Seg length ending at pt. 4131 <= 0.1 at 0.0583.  (removed)
     A       X, Y, Z:  101.0  156.55  4.5
2.5  Seg length ending at pt. 4219 <= 0.1 at 0.0762.  (removed)
     A       X, Y, Z:  102.87  161.24  4.81
2.5  Seg length ending at pt. 4261 <= 0.1 at 0.0787.  (removed)
     A       X, Y, Z:  103.49  162.86  4.37
2.5  Seg length ending at pt. 4285 <= 0.1 at 0.0245.  (removed)
     A       X, Y, Z:  103.63  164.14  4.3
2.5  Seg length ending at pt. 4287 <= 0.1 at 0.0412.  (removed)
     A       X, Y, Z:  103.61  164.19  4.28
2.5  Seg length ending at pt. 4377 <= 0.1 at 0.099.  (removed)
     A       X, Y, Z:  106.27  165.13  4.11
2.5  Seg length ending at pt. 4396 <= 0.1 at 0.0224.  (removed)
     A       X, Y, Z:  106.0  166.89  4.79
2.5  Seg length ending at pt. 4398 <= 0.1 at 0.0332.  (removed)
     A       X, Y, Z:  106.05  166.9  4.81
2.5  Seg length ending at pt. 4422 <= 0.1 at 0.0954.  (removed)
     A       X, Y, Z:  107.35  166.86  4.51
2.5  Seg length ending at pt. 4440 <= 0.1 at 0.097.  (removed)
     A       X, Y, Z:  107.34  166.86  4.52
2.5  Seg length ending at pt. 4442 <= 0.1 at 0.0949.  (removed)
     A       X, Y, Z:  107.52  166.85  4.46
2.5  Seg length ending at pt. 4461 <= 0.1 at 0.0954.  (removed)
     A       X, Y, Z:  107.39  166.86  4.5
2.5  Seg length ending at pt. 4504 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  108.72  171.53  3.87
2.5  Seg length ending at pt. 4607 <= 0.1 at 0.0663.  (removed)
     A       X, Y, Z:  94.48  133.73  3.99
2.5  Seg length ending at pt. 4655 <= 0.1 at 0.0173.  (removed)
     A       X, Y, Z:  89.68  136.41  4.47
2.5  Seg length ending at pt. 4657 <= 0.1 at 0.0346.  (removed)
     A       X, Y, Z:  89.64  136.38  4.44
2.5  Seg length ending at pt. 4825 <= 0.1 at 0.0735.  (removed)
     A       X, Y, Z:  81.65  145.69  4.19
2.5  Seg length ending at pt. 4893 <= 0.1 at 0.0608.  (removed)
     A       X, Y, Z:  78.23  154.09  4.71
2.5  Seg length ending at pt. 4932 <= 0.1 at 0.052.  (removed)
     A       X, Y, Z:  78.12  154.31  4.71
2.5  Seg length ending at pt. 4945 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  78.13  154.3  4.75
2.5  Seg length ending at pt. 5106 <= 0.1 at 0.0964.  (removed)
     A       X, Y, Z:  73.01  169.6  4.68
2.5  Seg length ending at pt. 5155 <= 0.1 at 0.0877.  (removed)
     A       X, Y, Z:  72.59  171.68  4.59
2.5  Seg length ending at pt. 5208 <= 0.1 at 0.02.  (removed)
     A       X, Y, Z:  70.82  173.86  4.59
2.5  Seg length ending at pt. 5210 <= 0.1 at 0.0424.  (removed)
     A       X, Y, Z:  70.81  173.85  4.65
2.5  Seg length ending at pt. 5264 <= 0.1 at 0.0224.  (removed)
     A       X, Y, Z:  70.54  174.25  4.59
2.5  Seg length ending at pt. 5266 <= 0.1 at 0.0458.  (removed)
     A       X, Y, Z:  70.55  174.22  4.65
2.5  Seg length ending at pt. 5321 <= 0.1 at 0.0224.  (removed)
     A       X, Y, Z:  70.25  174.9  4.52
2.5  Seg length ending at pt. 5323 <= 0.1 at 0.0374.  (removed)
     A       X, Y, Z:  70.22  174.88  4.57
2.5  Seg length ending at pt. 5335 <= 0.1 at 0.097.  (removed)
     A       X, Y, Z:  70.18  174.86  4.61
2.5  Seg length ending at pt. 5415 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  99.14  116.78  6.04
2.5  Seg length ending at pt. 3 <= 0.1 at 0.0616.  (removed)
     A       X, Y, Z:  101.0  103.81  4.86
2.5  Seg length ending at pt. 660 <= 0.1 at 0.099.  (removed)
     A       X, Y, Z:  89.77  116.46  4.68
2.5  Seg length ending at pt. 2075 <= 0.1 at 0.0917.  (removed)
     A       X, Y, Z:  83.66  96.8  3.95
2.5  Seg length ending at pt. 3027 <= 0.1 at 0.03.  (removed)
     A       X, Y, Z:  47.55  65.43  3.81
2.5  Seg length ending at pt. 3407 <= 0.1 at 0.0917.  (removed)
     A       X, Y, Z:  62.31  53.72  5.94
2.5  Seg length ending at pt. 3616 <= 0.1 at 0.0332.  (removed)
     A       X, Y, Z:  100.94  113.95  6.12
2.5  Seg length ending at pt. 4092 <= 0.1 at 0.0985.  (removed)
     A       X, Y, Z:  100.81  156.25  4.47
2.5  Seg length ending at pt. 4286 <= 0.1 at 0.0424.  (removed)
     A       X, Y, Z:  103.63  164.16  4.3
2.5  Seg length ending at pt. 4397 <= 0.1 at 0.0424.  (removed)
     A       X, Y, Z:  106.02  166.89  4.8
2.5  Seg length ending at pt. 4656 <= 0.1 at 0.0412.  (removed)
     A       X, Y, Z:  89.66  136.4  4.46
2.5  Seg length ending at pt. 5209 <= 0.1 at 0.04.  (removed)
     A       X, Y, Z:  70.82  173.86  4.61
2.5  Seg length ending at pt. 5265 <= 0.1 at 0.0447.  (removed)
     A       X, Y, Z:  70.54  174.24  4.61
2.5  Seg length ending at pt. 5322 <= 0.1 at 0.0458.  (removed)
     A       X, Y, Z:  70.24  174.89  4.54
2.5  Seg length ending at pt. 3029 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  47.54  65.47  3.86
2.6  Line 1 and line 255 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  101.01  103.87  4.85
2.6  Line 3044 and line 3076 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  47.46  65.62  4.03
2.6  Line 4057 and line 4065 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  99.64  154.74  4.64
2.6  Line 4151 and line 4167 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  101.56  156.04  5.1
2.6  Line 4153 and line 4169 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  101.79  155.93  5.2
2.6  Line 4399 and line 4431 have the same coordinates.  (second line removed)
     A      X, Y, Z:  106.13  166.92  4.83
2.6  Line 4400 and line 4431 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  106.27  166.97  4.87
2.6  Line 4826 and line 4829 have the same coordinates.  (second line removed)
     A      X, Y, Z:  81.6  145.64  4.21
2.6  Line 5219 and line 5243 have the same coordinates.  (second line removed)
     A      X, Y, Z:  70.81  173.85  4.75
2.6  Line 5267 and line 5287 have the same coordinates.  (second line removed)
     A      X, Y, Z:  70.56  174.18  4.72
2.1  Line 1 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  101.01  103.87  4.85
2.1  Line 37 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  98.95  96.49  4.86
2.1  Line 186 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  98.2  89.98  5.37
2.1  Line 501 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  96.46  108.45  4.89
2.1  Line 658 has 4 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  89.72  116.43  4.76
2.1  Line 716 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  87.93  117.42  3.93
2.1  Line 1000 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  113.98  112.62  5.02
2.1  Line 1140 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  124.52  115.54  4.67
2.1  Line 1197 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  126.59  116.56  3.91
2.1  Line 2000 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  89.66  97.76  4.29
2.1  Line 2073 has 4 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  83.68  96.76  3.87
2.1  Line 3025 has 6 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  47.56  65.41  3.79
2.1  Line 3405 has 4 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  62.39  53.76  5.96
2.1  Line 3585 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  100.42  110.09  5.82
2.1  Line 3614 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  100.93  113.94  6.15
2.1  Line 3682 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  100.39  114.64  5.94
2.1  Line 3707 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  99.67  115.83  6.14
2.1  Line 3903 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  98.0  150.39  4.35
2.1  Line 3995 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  99.41  154.48  4.45
2.1  Line 4048 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  99.68  154.82  4.47
2.1  Line 4090 has 4 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  100.72  156.21  4.47
2.1  Line 4130 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  100.95  156.58  4.5
2.1  Line 4218 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  102.87  161.21  4.88
2.1  Line 4284 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  103.64  164.12  4.31
2.1  Line 4395 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  105.98  166.88  4.79
2.1  Line 4503 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  108.7  171.47  3.8
2.1  Line 4606 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  94.5  133.79  3.97
2.1  Line 4654 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  89.69  136.42  4.48
2.1  Line 4824 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  81.7  145.74  4.17
2.1  Line 4892 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  78.22  154.09  4.65
2.1  Line 4931 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  78.11  154.32  4.66
2.1  Line 5105 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  73.09  169.65  4.7
2.1  Line 5154 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  72.51  171.65  4.61
2.1  Line 5207 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  70.82  173.86  4.57
2.1  Line 5263 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  70.54  174.26  4.57
2.1  Line 5320 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  70.26  174.9  4.5
2.1  Line 5414 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  99.21  116.8  6.1
 
 


Number of type A irregularities = 97
Number of type B1 irregularities = 65
Number of type B2 irregularities = 0
Number of type C irregularities = 0
