# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\M10Neuron5Imaris.ims.swc.swc created with StdSwc version 1.31 on 12/11/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\M10Neuron5Imaris.ims.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  96.65  176.37  14.15
4.3  Radius of line 2 at 4.992 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  96.48  176.43  14.01
4.3  Radius of line 3 at 4.992 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  96.31  176.49  13.87
4.3  Radius of line 4 at 2.13 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  96.03  176.6  13.75
4.3  Radius of line 134 at 9.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  96.65  176.37  14.15
4.3  Radius of line 135 at 4.992 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  96.55  176.86  13.94
4.3  Radius of line 136 at 2.13 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  96.36  177.13  13.85
4.5  Radius of terminal line 543 at 0.506 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  58.01  190.41  20.46
4.5  Radius of terminal line 1027 at 0.311 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  60.79  210.62  17.66
4.5  Radius of terminal line 1449 at 0.357 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  39.95  207.94  22.1
4.3  Radius of line 1457 at 9.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  96.65  176.37  14.15
4.3  Radius of line 1458 at 2.55 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  97.03  176.25  14.07
4.5  Radius of terminal line 2916 at 0.253 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  160.13  185.89  20.01
4.5  Radius of terminal line 2918 at 0.291 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  160.6  186.23  19.76
2.5  Seg length ending at pt. 265 <= 0.1 at 0.0548.  (removed)
     A       X, Y, Z:  77.13  180.41  17.33
2.5  Seg length ending at pt. 280 <= 0.1 at 0.0469.  (removed)
     A       X, Y, Z:  74.77  180.24  18.9
2.5  Seg length ending at pt. 373 <= 0.1 at 0.01.  (removed)
     A       X, Y, Z:  74.02  182.41  19.66
2.5  Seg length ending at pt. 375 <= 0.1 at 0.0141.  (removed)
     A       X, Y, Z:  74.0  182.42  19.66
2.5  Seg length ending at pt. 377 <= 0.1 at 0.0632.  (removed)
     A       X, Y, Z:  73.9  182.46  19.66
2.4  Seg length ending at pt. 554 >= 6.0 stdevs above mean at 0.788.  (no action taken)
     B1      X, Y, Z:  74.02  181.08  19.41
2.4  Seg length ending at pt. 555 >= 6.0 stdevs above mean at 0.7103.  (no action taken)
     B1      X, Y, Z:  73.52  180.69  19.73
2.5  Seg length ending at pt. 603 <= 0.1 at 0.0592.  (removed)
     A       X, Y, Z:  82.02  185.9  14.56
2.5  Seg length ending at pt. 868 <= 0.1 at 0.0574.  (removed)
     A       X, Y, Z:  68.0  198.51  15.46
2.5  Seg length ending at pt. 921 <= 0.1 at 0.086.  (removed)
     A       X, Y, Z:  67.69  199.69  15.64
2.5  Seg length ending at pt. 1457 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  96.65  176.37  14.15
2.5  Seg length ending at pt. 1601 <= 0.1 at 0.02.  (removed)
     A       X, Y, Z:  96.84  202.77  15.93
2.5  Seg length ending at pt. 1603 <= 0.1 at 0.051.  (removed)
     A       X, Y, Z:  96.85  202.79  16.0
2.5  Seg length ending at pt. 1647 <= 0.1 at 0.04.  (removed)
     A       X, Y, Z:  96.76  203.02  16.1
2.5  Seg length ending at pt. 1649 <= 0.1 at 0.0707.  (removed)
     A       X, Y, Z:  96.66  203.02  16.09
2.5  Seg length ending at pt. 1679 <= 0.1 at 0.0332.  (removed)
     A       X, Y, Z:  96.77  203.32  16.22
2.5  Seg length ending at pt. 1681 <= 0.1 at 0.0755.  (removed)
     A       X, Y, Z:  96.8  203.29  16.32
2.5  Seg length ending at pt. 2195 <= 0.1 at 0.0922.  (removed)
     A       X, Y, Z:  115.98  207.45  10.65
2.5  Seg length ending at pt. 2434 <= 0.1 at 0.0707.  (removed)
     A       X, Y, Z:  115.17  187.17  14.86
2.5  Seg length ending at pt. 2436 <= 0.1 at 0.0346.  (removed)
     A       X, Y, Z:  115.22  187.22  14.78
2.5  Seg length ending at pt. 2438 <= 0.1 at 0.0927.  (removed)
     A       X, Y, Z:  115.25  187.24  14.92
2.5  Seg length ending at pt. 2467 <= 0.1 at 0.086.  (removed)
     A       X, Y, Z:  115.91  187.19  14.88
2.5  Seg length ending at pt. 2660 <= 0.1 at 0.051.  (removed)
     A       X, Y, Z:  143.58  186.57  18.14
2.5  Seg length ending at pt. 2716 <= 0.1 at 0.0592.  (removed)
     A       X, Y, Z:  147.42  186.61  18.31
2.5  Seg length ending at pt. 2800 <= 0.1 at 0.0316.  (removed)
     A       X, Y, Z:  156.46  187.92  18.29
2.5  Seg length ending at pt. 2802 <= 0.1 at 0.0728.  (removed)
     A       X, Y, Z:  156.47  187.96  18.18
2.5  Seg length ending at pt. 2831 <= 0.1 at 0.0412.  (removed)
     A       X, Y, Z:  156.73  187.81  18.33
2.5  Seg length ending at pt. 2833 <= 0.1 at 0.0831.  (removed)
     A       X, Y, Z:  156.75  187.84  18.2
2.5  Seg length ending at pt. 3159 <= 0.1 at 0.0877.  (removed)
     A       X, Y, Z:  146.59  204.54  14.05
2.5  Seg length ending at pt. 3497 <= 0.1 at 0.0361.  (removed)
     A       X, Y, Z:  104.61  168.03  12.7
2.5  Seg length ending at pt. 3499 <= 0.1 at 0.0728.  (removed)
     A       X, Y, Z:  104.53  168.02  12.76
2.5  Seg length ending at pt. 3796 <= 0.1 at 0.0735.  (removed)
     A       X, Y, Z:  117.53  156.82  21.03
2.5  Seg length ending at pt. 3840 <= 0.1 at 0.0224.  (removed)
     A       X, Y, Z:  116.26  152.05  21.55
2.5  Seg length ending at pt. 3842 <= 0.1 at 0.0245.  (removed)
     A       X, Y, Z:  116.28  152.06  21.58
2.5  Seg length ending at pt. 3844 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  116.32  152.12  21.7
2.5  Seg length ending at pt. 3920 <= 0.1 at 0.0458.  (removed)
     A       X, Y, Z:  115.3  147.89  20.28
2.5  Seg length ending at pt. 3922 <= 0.1 at 0.0787.  (removed)
     A       X, Y, Z:  115.26  147.85  20.17
2.5  Seg length ending at pt. 4096 <= 0.1 at 0.0949.  (removed)
     A       X, Y, Z:  92.08  167.77  16.58
2.5  Seg length ending at pt. 4254 <= 0.1 at 0.09.  (removed)
     A       X, Y, Z:  90.09  167.85  17.59
2.5  Seg length ending at pt. 4279 <= 0.1 at 0.0922.  (removed)
     A       X, Y, Z:  86.78  167.78  17.86
2.5  Seg length ending at pt. 4323 <= 0.1 at 0.0436.  (removed)
     A       X, Y, Z:  81.59  171.33  18.79
2.5  Seg length ending at pt. 4325 <= 0.1 at 0.0854.  (removed)
     A       X, Y, Z:  81.5  171.42  18.8
2.5  Seg length ending at pt. 4625 <= 0.1 at 0.0995.  (removed)
     A       X, Y, Z:  74.38  147.32  17.32
2.5  Seg length ending at pt. 4705 <= 0.1 at 0.0866.  (removed)
     A       X, Y, Z:  70.95  138.69  17.34
2.5  Seg length ending at pt. 5031 <= 0.1 at 0.0245.  (removed)
     A       X, Y, Z:  97.0  163.9  18.75
2.5  Seg length ending at pt. 5033 <= 0.1 at 0.0458.  (removed)
     A       X, Y, Z:  96.97  163.91  18.82
2.5  Seg length ending at pt. 5598 <= 0.1 at 0.0548.  (removed)
     A       X, Y, Z:  114.93  119.75  16.45
2.5  Seg length ending at pt. 374 <= 0.1 at 0.02.  (removed)
     A       X, Y, Z:  74.01  182.41  19.66
2.5  Seg length ending at pt. 1602 <= 0.1 at 0.0424.  (removed)
     A       X, Y, Z:  96.85  202.78  15.95
2.5  Seg length ending at pt. 1648 <= 0.1 at 0.07.  (removed)
     A       X, Y, Z:  96.73  203.02  16.1
2.5  Seg length ending at pt. 1680 <= 0.1 at 0.0663.  (removed)
     A       X, Y, Z:  96.78  203.31  16.25
2.5  Seg length ending at pt. 2437 <= 0.1 at 0.052.  (removed)
     A       X, Y, Z:  115.23  187.23  14.83
2.5  Seg length ending at pt. 2801 <= 0.1 at 0.0768.  (removed)
     A       X, Y, Z:  156.47  187.94  18.25
2.5  Seg length ending at pt. 2832 <= 0.1 at 0.0927.  (removed)
     A       X, Y, Z:  156.74  187.82  18.28
2.5  Seg length ending at pt. 3498 <= 0.1 at 0.064.  (removed)
     A       X, Y, Z:  104.59  168.03  12.72
2.5  Seg length ending at pt. 3841 <= 0.1 at 0.0332.  (removed)
     A       X, Y, Z:  116.27  152.05  21.56
2.5  Seg length ending at pt. 3921 <= 0.1 at 0.0906.  (removed)
     A       X, Y, Z:  115.28  147.88  20.24
2.5  Seg length ending at pt. 4324 <= 0.1 at 0.0854.  (removed)
     A       X, Y, Z:  81.56  171.36  18.79
2.5  Seg length ending at pt. 5032 <= 0.1 at 0.0548.  (removed)
     A       X, Y, Z:  96.99  163.9  18.78
2.5  Seg length ending at pt. 376 <= 0.1 at 0.0762.  (removed)
     A       X, Y, Z:  73.96  182.44  19.66
2.7  Line 543 of rad 0.506 is an included side branch.  (removed)
     A      X, Y, Z:  58.01  190.41  20.46
2.7  Line 1027 of rad 0.311 is an included side branch.  (removed)
     A      X, Y, Z:  60.79  210.62  17.66
2.7  Line 1449 of rad 0.357 is an included side branch.  (removed)
     A      X, Y, Z:  39.95  207.94  22.1
2.6  Line 1 and line 134 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  96.65  176.37  14.15
2.6  Line 283 and line 291 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  74.53  180.09  18.67
4.4  Line 993 of rad 0.4 links to 988 of rad 0.188.  (no action taken)
     B1      X, Y, Z:  64.99  208.19  16.38
4.4  Line 3574 of rad 0.4 links to 3570 of rad 0.188.  (no action taken)
     B1      X, Y, Z:  111.61  161.23  14.49
2.1  Line 279 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  74.8  180.26  18.93
2.1  Line 372 has 6 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  74.03  182.41  19.66
2.1  Line 602 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  82.07  185.87  14.57
2.1  Line 867 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  68.04  198.52  15.5
2.1  Line 920 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  67.62  199.66  15.6
2.1  Line 1600 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  96.84  202.77  15.91
2.1  Line 1646 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  96.8  203.02  16.1
2.1  Line 1678 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  96.76  203.33  16.19
2.1  Line 2433 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  115.14  187.13  14.91
2.1  Line 2466 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  115.94  187.23  14.81
2.1  Line 2659 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  143.53  186.57  18.13
2.1  Line 2715 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  147.41  186.56  18.28
2.1  Line 2799 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  156.46  187.91  18.32
2.1  Line 2830 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  156.73  187.8  18.37
2.1  Line 3158 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  146.63  204.48  14.1
2.1  Line 3496 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  104.64  168.03  12.68
2.1  Line 3795 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  117.48  156.8  20.98
2.1  Line 3839 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  116.26  152.04  21.53
2.1  Line 3843 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  116.29  152.08  21.62
2.1  Line 3919 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  115.31  147.91  20.32
2.1  Line 4095 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  92.0  167.78  16.63
2.1  Line 4253 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  90.03  167.79  17.62
2.1  Line 4278 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  86.85  167.78  17.8
2.1  Line 4322 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  81.62  171.3  18.78
2.1  Line 5030 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  97.01  163.89  18.73
2.1  Line 5597 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  114.92  119.7  16.43
 
 


Number of type A irregularities = 61
Number of type B1 irregularities = 46
Number of type B2 irregularities = 0
Number of type C irregularities = 0
