# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\M10Neuron4Imaris.ims.swc.swc created with StdSwc version 1.31 on 12/11/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\M10Neuron4Imaris.ims.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  159.92  116.93  7.36
4.3  Radius of line 2 at 2.8 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  160.1  116.68  7.21
4.3  Radius of line 3 at 1.507 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  160.25  116.68  7.12
4.3  Radius of line 4 at 1.507 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  160.41  116.69  7.03
4.3  Radius of line 496 at 1.479 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  160.17  116.56  7.14
4.3  Radius of line 497 at 1.479 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  160.24  116.44  7.07
4.3  Radius of line 498 at 0.599 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  160.28  116.19  6.97
4.3  Radius of line 1449 at 0.529 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  49.14  29.02  13.91
4.3  Radius of line 1450 at 0.546 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  48.97  28.87  13.88
4.3  Radius of line 1451 at 0.567 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  48.81  28.71  13.86
4.3  Radius of line 1452 at 0.589 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  48.64  28.55  13.84
4.3  Radius of line 1453 at 0.595 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  48.56  28.47  13.82
4.3  Radius of line 1454 at 0.595 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  48.47  28.39  13.81
4.3  Radius of line 1455 at 0.593 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  48.3  28.22  13.78
4.3  Radius of line 1456 at 0.586 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  48.14  28.05  13.76
4.3  Radius of line 1457 at 0.588 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  48.06  27.97  13.75
4.3  Radius of line 1458 at 0.588 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  47.97  27.89  13.75
4.3  Radius of line 1459 at 0.587 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  47.81  27.73  13.73
4.3  Radius of line 1460 at 0.531 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  47.64  27.58  13.73
4.3  Radius of line 1504 at 0.607 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  40.06  22.02  13.94
4.3  Radius of line 1505 at 0.631 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  39.86  21.88  13.94
4.3  Radius of line 1506 at 0.608 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  39.67  21.74  13.94
4.3  Radius of line 1507 at 0.565 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  39.48  21.6  13.94
4.3  Radius of line 3286 at 0.566 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  132.91  23.41  16.66
4.3  Radius of line 3287 at 0.566 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  132.83  23.32  16.64
4.3  Radius of line 3288 at 0.565 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  132.75  23.23  16.64
4.3  Radius of line 3289 at 0.565 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  132.66  23.14  16.63
4.3  Radius of line 3290 at 0.52 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  132.59  23.06  16.64
4.3  Radius of line 3291 at 0.52 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  132.51  22.97  16.66
4.3  Radius of line 3339 at 0.52 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.9  15.69  18.18
4.3  Radius of line 3340 at 0.554 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.76  15.54  18.28
4.3  Radius of line 3341 at 0.592 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.62  15.39  18.4
4.3  Radius of line 3342 at 0.637 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.5  15.24  18.55
4.3  Radius of line 3343 at 0.678 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.38  15.08  18.7
4.3  Radius of line 3344 at 0.688 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.26  14.9  18.82
4.3  Radius of line 3345 at 0.697 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.16  14.69  18.89
4.3  Radius of line 3346 at 0.71 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.11  14.45  18.89
4.5  Radius of terminal line 3347 at 0.727 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.09  14.19  18.82
4.3  Radius of line 3348 at 0.547 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.21  15.09  18.66
4.5  Radius of terminal line 3350 at 0.373 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  124.83  15.47  18.6
4.5  Radius of terminal line 3352 at 0.326 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.87  14.87  18.13
4.3  Radius of line 4291 at 1.479 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  160.44  116.62  7.06
4.3  Radius of line 4292 at 0.599 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  160.74  116.69  6.98
4.3  Radius of line 5191 at 1.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  159.86  117.05  6.82
4.3  Radius of line 5192 at 0.565 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  159.65  117.29  6.57
4.3  Radius of line 5539 at 0.565 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  160.26  117.27  7.06
2.5  Seg length ending at pt. 271 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  161.98  136.76  8.19
2.5  Seg length ending at pt. 273 <= 0.1 at 0.01.  (removed)
     A       X, Y, Z:  161.97  136.77  8.18
2.5  Seg length ending at pt. 275 <= 0.1 at 0.0374.  (removed)
     A       X, Y, Z:  161.95  136.81  8.17
2.5  Seg length ending at pt. 964 <= 0.1 at 0.0592.  (removed)
     A       X, Y, Z:  76.39  61.68  13.36
2.5  Seg length ending at pt. 1038 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  65.15  50.06  13.31
2.5  Seg length ending at pt. 1348 <= 0.1 at 0.051.  (removed)
     A       X, Y, Z:  61.04  46.22  13.66
2.5  Seg length ending at pt. 1541 <= 0.1 at 0.01.  (removed)
     A       X, Y, Z:  33.83  17.82  12.76
2.5  Seg length ending at pt. 1543 <= 0.1 at 0.0245.  (removed)
     A       X, Y, Z:  33.82  17.8  12.74
2.5  Seg length ending at pt. 1545 <= 0.1 at 0.06.  (removed)
     A       X, Y, Z:  33.79  17.75  12.68
2.5  Seg length ending at pt. 2782 <= 0.1 at 0.0141.  (removed)
     A       X, Y, Z:  73.99  73.06  17.75
2.5  Seg length ending at pt. 2784 <= 0.1 at 0.0361.  (removed)
     A       X, Y, Z:  73.96  73.11  17.75
2.5  Seg length ending at pt. 3163 <= 0.1 at 0.0735.  (removed)
     A       X, Y, Z:  147.34  45.05  14.3
2.5  Seg length ending at pt. 3169 <= 0.1 at 0.0141.  (removed)
     A       X, Y, Z:  147.2  44.12  14.3
2.5  Seg length ending at pt. 3171 <= 0.1 at 0.0316.  (removed)
     A       X, Y, Z:  147.18  44.08  14.29
2.5  Seg length ending at pt. 3305 <= 0.1 at 0.0224.  (removed)
     A       X, Y, Z:  130.27  21.0  16.83
2.5  Seg length ending at pt. 3307 <= 0.1 at 0.0574.  (removed)
     A       X, Y, Z:  130.21  20.94  16.84
2.5  Seg length ending at pt. 3479 <= 0.1 at 0.0735.  (removed)
     A       X, Y, Z:  138.1  29.92  16.41
2.5  Seg length ending at pt. 3481 <= 0.1 at 0.0469.  (removed)
     A       X, Y, Z:  138.18  30.0  16.33
2.5  Seg length ending at pt. 3628 <= 0.1 at 0.0412.  (removed)
     A       X, Y, Z:  152.3  48.39  18.22
2.5  Seg length ending at pt. 3630 <= 0.1 at 0.0755.  (removed)
     A       X, Y, Z:  152.4  48.42  18.25
2.5  Seg length ending at pt. 3633 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  152.75  48.6  18.41
2.5  Seg length ending at pt. 3635 <= 0.1 at 0.0141.  (removed)
     A       X, Y, Z:  152.75  48.61  18.42
2.5  Seg length ending at pt. 3637 <= 0.1 at 0.0332.  (removed)
     A       X, Y, Z:  152.77  48.66  18.44
2.4  Seg length ending at pt. 3677 >= 6.0 stdevs above mean at 0.5711.  (no action taken)
     B1      X, Y, Z:  153.15  50.64  18.66
2.5  Seg length ending at pt. 3878 <= 0.1 at 0.0954.  (removed)
     A       X, Y, Z:  141.3  54.09  14.94
2.5  Seg length ending at pt. 4591 <= 0.1 at 0.064.  (removed)
     A       X, Y, Z:  198.01  66.34  10.17
2.4  Seg length ending at pt. 5191 >= 6.0 stdevs above mean at 0.5887.  (no action taken)
     B1      X, Y, Z:  159.86  117.05  6.82
2.5  Seg length ending at pt. 272 <= 0.1 at 0.0141.  (removed)
     A       X, Y, Z:  161.97  136.77  8.19
2.5  Seg length ending at pt. 276 <= 0.1 at 0.098.  (removed)
     A       X, Y, Z:  161.93  136.86  8.14
2.5  Seg length ending at pt. 1542 <= 0.1 at 0.0141.  (removed)
     A       X, Y, Z:  33.83  17.81  12.76
2.5  Seg length ending at pt. 2783 <= 0.1 at 0.0361.  (removed)
     A       X, Y, Z:  73.98  73.08  17.75
2.5  Seg length ending at pt. 3170 <= 0.1 at 0.03.  (removed)
     A       X, Y, Z:  147.19  44.11  14.29
2.5  Seg length ending at pt. 3306 <= 0.1 at 0.05.  (removed)
     A       X, Y, Z:  130.25  20.98  16.83
2.5  Seg length ending at pt. 3482 <= 0.1 at 0.09.  (removed)
     A       X, Y, Z:  138.12  30.05  16.35
2.5  Seg length ending at pt. 3629 <= 0.1 at 0.0735.  (removed)
     A       X, Y, Z:  152.33  48.4  18.23
2.5  Seg length ending at pt. 3634 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  152.75  48.6  18.41
2.5  Seg length ending at pt. 274 <= 0.1 at 0.0245.  (removed)
     A       X, Y, Z:  161.97  136.78  8.18
2.5  Seg length ending at pt. 1544 <= 0.1 at 0.0616.  (removed)
     A       X, Y, Z:  33.81  17.79  12.72
2.5  Seg length ending at pt. 3636 <= 0.1 at 0.0374.  (removed)
     A       X, Y, Z:  152.76  48.63  18.43
2.7  Line 488 of rad 0.125 is an included side branch.  (removed)
     A      X, Y, Z:  165.26  128.63  6.43
2.6  Line 364 and line 375 have the same coordinates.  (second line removed)
     A      X, Y, Z:  162.05  136.88  8.56
4.4  Line 2 of rad 2.8 links to 1 of rad 0.125.  (no action taken)
     B1      X, Y, Z:  160.1  116.68  7.21
2.1  Line 270 has 8 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  161.98  136.76  8.19
2.1  Line 963 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  76.44  61.71  13.35
2.1  Line 1347 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  61.08  46.25  13.67
2.1  Line 1540 has 7 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  33.83  17.82  12.77
2.1  Line 2781 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  74.0  73.05  17.75
2.1  Line 3162 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  147.36  45.12  14.29
2.1  Line 3168 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  147.21  44.13  14.3
2.1  Line 3304 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  130.29  21.01  16.83
2.1  Line 3627 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  152.26  48.39  18.21
2.1  Line 3632 has 7 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  152.75  48.6  18.41
2.1  Line 4590 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  197.97  66.37  10.13
 
 


Number of type A irregularities = 39
Number of type B1 irregularities = 60
Number of type B2 irregularities = 0
Number of type C irregularities = 0
