# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\M10Neuron3Imaris.ims.swc.swc created with StdSwc version 1.31 on 12/11/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\M10Neuron3Imaris.ims.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  104.01  154.09  8.07
4.3  Radius of line 2 at 4.142 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  103.74  154.28  8.08
4.3  Radius of line 3 at 4.142 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  103.47  154.47  8.1
4.3  Radius of line 301 at 9.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  104.01  154.09  8.07
4.3  Radius of line 302 at 2.55 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  103.68  154.4  8.06
4.3  Radius of line 2394 at 9.0 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  104.01  154.09  8.07
4.3  Radius of line 2395 at 2.55 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  103.69  153.91  7.98
4.5  Radius of terminal line 4178 at 0.22 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  100.72  35.16  21.17
4.5  Radius of terminal line 4184 at 0.22 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  100.05  35.56  21.17
4.5  Radius of terminal line 4661 at 0.22 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  101.65  36.99  21.17
4.5  Radius of terminal line 5604 at 0.334 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  114.21  62.72  17.57
4.5  Radius of terminal line 5617 at 0.301 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  111.98  64.87  17.0
2.5  Seg length ending at pt. 261 <= 0.1 at 0.0768.  (removed)
     A       X, Y, Z:  67.78  160.47  16.51
2.5  Seg length ending at pt. 1136 <= 0.1 at 0.051.  (removed)
     A       X, Y, Z:  28.42  217.83  12.78
2.5  Seg length ending at pt. 1528 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  128.76  185.07  7.91
2.5  Seg length ending at pt. 2394 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  104.01  154.09  8.07
2.4  Seg length ending at pt. 2396 >= 6.0 stdevs above mean at 0.5832.  (no action taken)
     B1      X, Y, Z:  104.11  153.65  7.67
2.5  Seg length ending at pt. 3266 <= 0.1 at 0.0768.  (removed)
     A       X, Y, Z:  130.62  94.48  11.56
2.5  Seg length ending at pt. 3286 <= 0.1 at 0.0787.  (removed)
     A       X, Y, Z:  131.83  95.25  11.85
2.5  Seg length ending at pt. 3522 <= 0.1 at 0.064.  (removed)
     A       X, Y, Z:  115.39  71.48  15.99
2.5  Seg length ending at pt. 3542 <= 0.1 at 0.0141.  (removed)
     A       X, Y, Z:  113.65  69.77  15.77
2.5  Seg length ending at pt. 3544 <= 0.1 at 0.051.  (removed)
     A       X, Y, Z:  113.6  69.78  15.83
2.5  Seg length ending at pt. 3683 <= 0.1 at 0.07.  (removed)
     A       X, Y, Z:  111.18  57.07  13.54
2.5  Seg length ending at pt. 3764 <= 0.1 at 0.0316.  (removed)
     A       X, Y, Z:  113.94  61.5  17.47
2.5  Seg length ending at pt. 3766 <= 0.1 at 0.0632.  (removed)
     A       X, Y, Z:  113.97  61.42  17.47
2.5  Seg length ending at pt. 3780 <= 0.1 at 0.0583.  (removed)
     A       X, Y, Z:  114.14  61.04  17.43
2.5  Seg length ending at pt. 3986 <= 0.1 at 0.0141.  (removed)
     A       X, Y, Z:  106.88  43.36  19.43
2.5  Seg length ending at pt. 3988 <= 0.1 at 0.03.  (removed)
     A       X, Y, Z:  106.85  43.33  19.44
2.5  Seg length ending at pt. 4172 <= 0.1 at 0.0616.  (removed)
     A       X, Y, Z:  99.98  34.34  21.27
2.5  Seg length ending at pt. 4246 <= 0.1 at 0.0806.  (removed)
     A       X, Y, Z:  102.92  27.15  17.9
2.5  Seg length ending at pt. 4281 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  102.86  26.48  17.5
2.5  Seg length ending at pt. 4283 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  102.87  26.48  17.49
2.5  Seg length ending at pt. 4285 <= 0.1 at 0.0245.  (removed)
     A       X, Y, Z:  102.89  26.5  17.46
2.5  Seg length ending at pt. 4577 <= 0.1 at 0.0424.  (removed)
     A       X, Y, Z:  97.12  14.76  12.96
2.5  Seg length ending at pt. 4579 <= 0.1 at 0.097.  (removed)
     A       X, Y, Z:  97.25  14.81  12.99
2.5  Seg length ending at pt. 4654 <= 0.1 at 0.0283.  (removed)
     A       X, Y, Z:  101.92  38.26  21.27
2.5  Seg length ending at pt. 4656 <= 0.1 at 0.0806.  (removed)
     A       X, Y, Z:  101.83  38.18  21.24
2.5  Seg length ending at pt. 4771 <= 0.1 at 0.0922.  (removed)
     A       X, Y, Z:  117.09  52.54  13.86
2.4  Seg length ending at pt. 5113 >= 6.0 stdevs above mean at 0.613.  (no action taken)
     B1      X, Y, Z:  128.87  44.95  20.75
2.4  Seg length ending at pt. 5120 >= 6.0 stdevs above mean at 0.642.  (no action taken)
     B1      X, Y, Z:  128.91  44.8  20.82
2.5  Seg length ending at pt. 5194 <= 0.1 at 0.0224.  (removed)
     A       X, Y, Z:  132.28  39.17  19.52
2.5  Seg length ending at pt. 5196 <= 0.1 at 0.0412.  (removed)
     A       X, Y, Z:  132.34  39.16  19.54
2.5  Seg length ending at pt. 5272 <= 0.1 at 0.0173.  (removed)
     A       X, Y, Z:  132.73  34.55  19.23
2.5  Seg length ending at pt. 5274 <= 0.1 at 0.0374.  (removed)
     A       X, Y, Z:  132.74  34.59  19.26
2.5  Seg length ending at pt. 5312 <= 0.1 at 0.0548.  (removed)
     A       X, Y, Z:  132.63  33.88  19.31
2.5  Seg length ending at pt. 5379 <= 0.1 at 0.0781.  (removed)
     A       X, Y, Z:  135.54  30.89  19.49
2.5  Seg length ending at pt. 5449 <= 0.1 at 0.0141.  (removed)
     A       X, Y, Z:  135.49  27.51  19.49
2.5  Seg length ending at pt. 5451 <= 0.1 at 0.0173.  (removed)
     A       X, Y, Z:  135.47  27.5  19.5
2.5  Seg length ending at pt. 5453 <= 0.1 at 0.0648.  (removed)
     A       X, Y, Z:  135.4  27.49  19.56
2.5  Seg length ending at pt. 5482 <= 0.1 at 0.05.  (removed)
     A       X, Y, Z:  135.55  27.29  19.36
2.5  Seg length ending at pt. 5484 <= 0.1 at 0.0995.  (removed)
     A       X, Y, Z:  135.66  27.31  19.25
2.5  Seg length ending at pt. 3543 <= 0.1 at 0.0424.  (removed)
     A       X, Y, Z:  113.63  69.77  15.79
2.5  Seg length ending at pt. 3765 <= 0.1 at 0.0539.  (removed)
     A       X, Y, Z:  113.95  61.48  17.47
2.5  Seg length ending at pt. 3987 <= 0.1 at 0.0283.  (removed)
     A       X, Y, Z:  106.87  43.35  19.43
2.5  Seg length ending at pt. 4282 <= 0.1 at 0.0141.  (removed)
     A       X, Y, Z:  102.87  26.48  17.49
2.5  Seg length ending at pt. 4286 <= 0.1 at 0.0768.  (removed)
     A       X, Y, Z:  102.93  26.52  17.43
2.5  Seg length ending at pt. 4578 <= 0.1 at 0.0877.  (removed)
     A       X, Y, Z:  97.16  14.78  12.97
2.5  Seg length ending at pt. 4655 <= 0.1 at 0.0714.  (removed)
     A       X, Y, Z:  101.89  38.23  21.26
2.5  Seg length ending at pt. 5195 <= 0.1 at 0.0458.  (removed)
     A       X, Y, Z:  132.3  39.16  19.53
2.5  Seg length ending at pt. 5273 <= 0.1 at 0.03.  (removed)
     A       X, Y, Z:  132.73  34.56  19.24
2.5  Seg length ending at pt. 5450 <= 0.1 at 0.0224.  (removed)
     A       X, Y, Z:  135.48  27.51  19.49
2.5  Seg length ending at pt. 4284 <= 0.1 at 0.03.  (removed)
     A       X, Y, Z:  102.88  26.49  17.48
2.5  Seg length ending at pt. 5452 <= 0.1 at 0.0648.  (removed)
     A       X, Y, Z:  135.45  27.5  19.52
2.6  Line 1 and line 301 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  104.01  154.09  8.07
2.6  Line 3688 and line 3698 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  111.51  57.03  13.35
2.6  Line 4257 and line 4267 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  103.08  27.23  17.72
2.6  Line 4258 and line 4268 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  103.29  27.3  17.5
4.4  Line 301 of rad 9.0 links to 2 of rad 4.142.  (no action taken)
     B1      X, Y, Z:  104.01  154.09  8.07
4.4  Line 3985 of rad 0.4 links to 3984 of rad 0.188.  (no action taken)
     B1      X, Y, Z:  106.89  43.37  19.43
4.4  Line 4397 of rad 0.283 links to 4393 of rad 0.125.  (no action taken)
     B1      X, Y, Z:  102.33  25.08  16.61
2.1  Line 260 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  67.77  160.44  16.58
2.1  Line 1135 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  28.41  217.78  12.78
2.1  Line 3265 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  130.59  94.49  11.49
2.1  Line 3285 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  131.78  95.24  11.91
2.1  Line 3521 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  115.44  71.52  15.99
2.1  Line 3541 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  113.66  69.77  15.76
2.1  Line 3682 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  111.24  57.04  13.52
2.1  Line 3763 has 4 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  113.93  61.53  17.47
2.1  Line 3779 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  114.11  61.09  17.43
2.1  Line 3985 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  106.89  43.37  19.43
2.1  Line 4171 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  99.97  34.28  21.28
2.1  Line 4245 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  102.87  27.13  17.96
2.1  Line 4280 has 8 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  102.86  26.48  17.5
2.1  Line 4576 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  97.08  14.75  12.95
2.1  Line 4653 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  101.94  38.28  21.27
2.1  Line 4770 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  117.18  52.52  13.86
2.1  Line 5193 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  132.26  39.17  19.51
2.1  Line 5271 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  132.72  34.54  19.22
2.1  Line 5311 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  132.68  33.86  19.3
2.1  Line 5378 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  135.48  30.86  19.53
2.1  Line 5448 has 7 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  135.5  27.51  19.48
2.1  Line 5481 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  135.52  27.29  19.4
2.1  Line 5483 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  135.59  27.3  19.32
 
 


Number of type A irregularities = 48
Number of type B1 irregularities = 45
Number of type B2 irregularities = 0
Number of type C irregularities = 0
