# Standardization file for C:\Users\Carolina\Desktop\gaa2ct\data_autoproc\Temp_LMeasure\SLC25A1_Cortex_WT3-1.swc.swc created with StdSwc version 1.31 on 4/22/22.
# Edited SWC file saved as C:\Users\Carolina\Desktop\gaa2ct\data_autoproc\Temp_LMeasure\SLC25A1_Cortex_WT3-1.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  -4882.85  908.96  2583.07
2.5  Seg length ending at pt. 2 <= 0.1 at 0.0141.  (removed)
     A       X, Y, Z:  -4882.84  908.95  2583.07
2.5  Seg length ending at pt. 4 <= 0.1 at 0.0316.  (removed)
     A       X, Y, Z:  -4882.8  908.94  2583.08
2.5  Seg length ending at pt. 230 <= 0.1 at 0.0906.  (removed)
     A       X, Y, Z:  -4817.52  859.33  2583.03
2.5  Seg length ending at pt. 1291 <= 0.1 at 0.051.  (removed)
     A       X, Y, Z:  -4906.43  867.14  2583.14
2.5  Seg length ending at pt. 1293 <= 0.1 at 0.0954.  (removed)
     A       X, Y, Z:  -4906.48  867.0  2583.12
2.5  Seg length ending at pt. 1304 <= 0.1 at 0.0141.  (removed)
     A       X, Y, Z:  -4908.05  863.69  2583.13
2.5  Seg length ending at pt. 1306 <= 0.1 at 0.0245.  (removed)
     A       X, Y, Z:  -4908.06  863.7  2583.1
2.5  Seg length ending at pt. 1308 <= 0.1 at 0.0831.  (removed)
     A       X, Y, Z:  -4908.12  863.73  2582.99
2.5  Seg length ending at pt. 1818 <= 0.1 at 0.0768.  (removed)
     A       X, Y, Z:  -4894.53  842.94  2583.05
2.5  Seg length ending at pt. 1989 <= 0.1 at 0.0361.  (removed)
     A       X, Y, Z:  -4899.62  847.03  2583.12
2.5  Seg length ending at pt. 1991 <= 0.1 at 0.0806.  (removed)
     A       X, Y, Z:  -4899.62  847.14  2583.05
2.5  Seg length ending at pt. 2497 <= 0.1 at 0.086.  (removed)
     A       X, Y, Z:  -4897.46  896.44  2583.13
2.5  Seg length ending at pt. 2588 <= 0.1 at 0.0927.  (removed)
     A       X, Y, Z:  -4917.07  869.95  2583.12
2.5  Seg length ending at pt. 2838 <= 0.1 at 0.0906.  (removed)
     A       X, Y, Z:  -4931.2  871.7  2583.1
2.5  Seg length ending at pt. 3137 <= 0.1 at 0.051.  (removed)
     A       X, Y, Z:  -4915.72  856.13  2583.12
2.5  Seg length ending at pt. 3299 <= 0.1 at 0.0548.  (removed)
     A       X, Y, Z:  -4922.5  880.07  2583.07
2.5  Seg length ending at pt. 3748 <= 0.1 at 0.0224.  (removed)
     A       X, Y, Z:  -4916.35  898.77  2582.93
2.4  Seg length ending at pt. 3762 >= 6.0 stdevs above mean at 1.8162.  (no action taken)
     B1      X, Y, Z:  -4916.72  898.94  2583.05
2.5  Seg length ending at pt. 4160 <= 0.1 at 0.0316.  (removed)
     A       X, Y, Z:  -4872.54  961.56  2583.14
2.5  Seg length ending at pt. 4162 <= 0.1 at 0.0548.  (removed)
     A       X, Y, Z:  -4872.57  961.63  2583.13
2.5  Seg length ending at pt. 4379 <= 0.1 at 0.0927.  (removed)
     A       X, Y, Z:  -4890.65  969.19  2583.1
2.5  Seg length ending at pt. 4877 <= 0.1 at 0.0911.  (removed)
     A       X, Y, Z:  -4871.71  981.92  2583.14
2.5  Seg length ending at pt. 4919 <= 0.1 at 0.0436.  (removed)
     A       X, Y, Z:  -4868.94  996.39  2583.15
2.5  Seg length ending at pt. 4921 <= 0.1 at 0.0995.  (removed)
     A       X, Y, Z:  -4868.84  996.49  2583.16
2.5  Seg length ending at pt. 4987 <= 0.1 at 0.0283.  (removed)
     A       X, Y, Z:  -4869.26  1020.39  2583.13
2.5  Seg length ending at pt. 4989 <= 0.1 at 0.0566.  (removed)
     A       X, Y, Z:  -4869.32  1020.45  2583.13
2.5  Seg length ending at pt. 5132 <= 0.1 at 0.0412.  (removed)
     A       X, Y, Z:  -4862.95  1007.3  2583.03
2.5  Seg length ending at pt. 5134 <= 0.1 at 0.0995.  (removed)
     A       X, Y, Z:  -4862.84  1007.38  2582.96
2.5  Seg length ending at pt. 6284 <= 0.1 at 0.0245.  (removed)
     A       X, Y, Z:  -4882.85  908.96  2583.07
2.4  Seg length ending at pt. 6285 >= 6.0 stdevs above mean at 0.9029.  (no action taken)
     B1      X, Y, Z:  -4883.54  909.49  2583.22
2.5  Seg length ending at pt. 6348 <= 0.1 at 0.0954.  (removed)
     A       X, Y, Z:  -4903.12  922.09  2583.14
2.5  Seg length ending at pt. 6916 <= 0.1 at 0.0964.  (removed)
     A       X, Y, Z:  -4938.51  946.65  2583.09
2.5  Seg length ending at pt. 7272 <= 0.1 at 0.0245.  (removed)
     A       X, Y, Z:  -4882.85  908.96  2583.07
2.5  Seg length ending at pt. 7378 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  -4884.49  877.09  2582.67
2.4  Seg length ending at pt. 7401 >= 6.0 stdevs above mean at 3.1972.  (no action taken)
     B1      X, Y, Z:  -4884.24  876.73  2582.74
2.5  Seg length ending at pt. 8056 <= 0.1 at 0.099.  (removed)
     A       X, Y, Z:  -4875.02  892.7  2582.82
2.5  Seg length ending at pt. 8169 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  -4882.85  908.96  2583.07
2.5  Seg length ending at pt. 8355 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  -4882.85  908.96  2583.07
2.5  Seg length ending at pt. 3 <= 0.1 at 0.0245.  (removed)
     A       X, Y, Z:  -4882.83  908.95  2583.08
2.5  Seg length ending at pt. 1305 <= 0.1 at 0.0224.  (removed)
     A       X, Y, Z:  -4908.05  863.69  2583.12
2.5  Seg length ending at pt. 1990 <= 0.1 at 0.086.  (removed)
     A       X, Y, Z:  -4899.62  847.07  2583.09
2.5  Seg length ending at pt. 4161 <= 0.1 at 0.0539.  (removed)
     A       X, Y, Z:  -4872.55  961.58  2583.14
2.5  Seg length ending at pt. 4920 <= 0.1 at 0.0854.  (removed)
     A       X, Y, Z:  -4868.91  996.42  2583.15
2.5  Seg length ending at pt. 4988 <= 0.1 at 0.0566.  (removed)
     A       X, Y, Z:  -4869.28  1020.41  2583.13
2.5  Seg length ending at pt. 5133 <= 0.1 at 0.0949.  (removed)
     A       X, Y, Z:  -4862.91  1007.33  2583.01
2.5  Seg length ending at pt. 1307 <= 0.1 at 0.0917.  (removed)
     A       X, Y, Z:  -4908.08  863.71  2583.06
2.7  Line 3998 of rad 0.836 is an included side branch.  (removed)
     A      X, Y, Z:  -4903.64  905.84  2582.45
2.7  Line 5135 of rad 0.752 is an included side branch.  (removed)
     A      X, Y, Z:  -4862.69  1007.49  2582.88
2.7  Line 6178 of rad 0.838 is an included side branch.  (removed)
     A      X, Y, Z:  -4862.83  925.81  2582.3
2.7  Line 6659 of rad 0.886 is an included side branch.  (removed)
     A      X, Y, Z:  -4923.64  923.47  2582.44
2.7  Line 7209 of rad 1.169 is an included side branch.  (removed)
     A      X, Y, Z:  -4894.85  927.16  2582.55
2.6  Line 1 and line 1162 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  -4882.85  908.96  2583.07
2.6  Line 1 and line 4019 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  -4882.85  908.96  2583.07
2.6  Line 659 and line 669 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  -4857.02  870.15  2582.73
2.6  Line 919 and line 935 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  -4867.14  897.57  2582.98
2.6  Line 1162 and line 4019 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  -4882.85  908.96  2583.07
2.6  Line 2055 and line 2113 have the same coordinates.  Radii do not match.  (no action taken)
     B1      X, Y, Z:  -4899.62  847.29  2582.96
2.6  Line 2903 and line 2926 have the same coordinates.  (second line removed)
     A      X, Y, Z:  -4931.37  871.86  2582.91
2.6  Line 4464 and line 4494 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  -4892.05  968.66  2582.73
2.6  Line 4718 and line 4788 have the same coordinates.  Radii do not match.  (no action taken)
     B1      X, Y, Z:  -4872.42  961.44  2583.05
2.6  Line 4719 and line 4789 have the same coordinates.  Radii do not match.  (no action taken)
     B1      X, Y, Z:  -4872.34  961.25  2583.03
2.6  Line 4720 and line 4790 have the same coordinates.  Radii do not match.  (no action taken)
     B1      X, Y, Z:  -4872.33  961.02  2583.02
2.6  Line 4721 and line 4791 have the same coordinates.  Radii do not match.  (no action taken)
     B1      X, Y, Z:  -4872.35  960.79  2583.0
2.6  Line 5244 and line 5269 have the same coordinates.  Radii do not match.  (no action taken)
     B1      X, Y, Z:  -4868.72  996.46  2583.03
2.6  Line 7361 and line 7380 have the same coordinates.  Radii do not match.  (no action taken)
     B1      X, Y, Z:  -4884.64  877.0  2582.43
2.6  Line 7365 and line 7384 have the same coordinates.  Radii do not match.  (no action taken)
     B1      X, Y, Z:  -4885.03  876.21  2582.41
4.4  Line 7401 of rad 0.985 links to 7377 of rad 0.369.  (no action taken)
     B1      X, Y, Z:  -4884.24  876.73  2582.74
2.1  Line 1 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  -4882.85  908.96  2583.07
2.1  Line 229 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  -4817.53  859.33  2583.12
2.1  Line 1290 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  -4906.42  867.19  2583.14
2.1  Line 1292 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  -4906.45  867.09  2583.13
2.1  Line 1303 has 7 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  -4908.04  863.69  2583.14
2.1  Line 1817 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  -4894.56  842.93  2583.12
2.1  Line 1988 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  -4899.62  847.0  2583.14
2.1  Line 2496 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  -4897.38  896.47  2583.14
2.1  Line 2587 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  -4917.09  870.04  2583.13
2.1  Line 2837 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  -4931.11  871.71  2583.1
2.1  Line 3136 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  -4915.69  856.17  2583.13
2.1  Line 3298 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  -4922.45  880.06  2583.09
2.1  Line 4159 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  -4872.53  961.53  2583.14
2.1  Line 4378 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  -4890.56  969.17  2583.11
2.1  Line 4876 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  -4871.72  981.83  2583.13
2.1  Line 4918 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  -4868.97  996.36  2583.14
2.1  Line 4986 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  -4869.24  1020.37  2583.13
2.1  Line 5131 has 4 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  -4862.98  1007.28  2583.05
2.1  Line 6347 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  -4903.03  922.06  2583.13
2.1  Line 8055 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  -4875.06  892.79  2582.83
 
 


Number of type A irregularities = 49
Number of type B1 irregularities = 39
Number of type B2 irregularities = 0
Number of type C irregularities = 0
