# Standardization file for C:\Users\Carolina\Desktop\gaa2ct\data_autoproc\Temp_LMeasure\SLC13A5_Hippo_WT1-1.CNG.swc.swc created with StdSwc version 1.31 on 4/22/22.
# Edited SWC file saved as C:\Users\Carolina\Desktop\gaa2ct\data_autoproc\Temp_LMeasure\SLC13A5_Hippo_WT1-1.CNG.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  4281.17  303.08  2494.02
2.5  Seg length ending at pt. 2 <= 0.1 at 0.0316.  (removed)
     A       X, Y, Z:  4281.14  303.08  2494.03
2.5  Seg length ending at pt. 4 <= 0.1 at 0.0831.  (removed)
     A       X, Y, Z:  4281.02  303.06  2494.06
2.5  Seg length ending at pt. 1304 <= 0.1 at 0.086.  (removed)
     A       X, Y, Z:  4247.42  299.97  2491.96
2.5  Seg length ending at pt. 1700 <= 0.1 at 0.1.  (removed)
     A       X, Y, Z:  4237.73  316.59  2492.74
2.5  Seg length ending at pt. 2017 <= 0.1 at 0.051.  (removed)
     A       X, Y, Z:  4265.39  287.71  2491.84
2.5  Seg length ending at pt. 2722 <= 0.1 at 0.0735.  (removed)
     A       X, Y, Z:  4281.17  303.08  2494.02
2.4  Seg length ending at pt. 2723 >= 6.0 stdevs above mean at 1.0161.  (no action taken)
     B1      X, Y, Z:  4280.5  302.25  2494.03
2.5  Seg length ending at pt. 2830 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  4294.58  270.72  2491.62
2.5  Seg length ending at pt. 3328 <= 0.1 at 0.0735.  (removed)
     A       X, Y, Z:  4281.17  303.08  2494.02
2.5  Seg length ending at pt. 3764 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  4281.17  303.08  2494.02
2.5  Seg length ending at pt. 3826 <= 0.1 at 0.0985.  (removed)
     A       X, Y, Z:  4264.94  320.83  2492.12
2.5  Seg length ending at pt. 3831 <= 0.1 at 0.0949.  (removed)
     A       X, Y, Z:  4264.08  321.19  2492.11
2.5  Seg length ending at pt. 4571 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  4281.17  303.08  2494.02
2.5  Seg length ending at pt. 4977 <= 0.1 at 0.0825.  (removed)
     A       X, Y, Z:  4303.59  269.53  2491.8
2.5  Seg length ending at pt. 3 <= 0.1 at 0.0735.  (removed)
     A       X, Y, Z:  4281.1  303.07  2494.04
2.7  Line 853 of rad 0.75 is an included side branch.  (removed)
     A      X, Y, Z:  4201.49  245.16  2496.17
2.7  Line 1099 of rad 0.75 is an included side branch.  (removed)
     A      X, Y, Z:  4228.66  271.89  2492.13
2.7  Line 1515 of rad 0.75 is an included side branch.  (removed)
     A      X, Y, Z:  4227.19  323.93  2492.95
2.7  Line 3010 of rad 0.75 is an included side branch.  (removed)
     A      X, Y, Z:  4291.42  264.08  2491.82
2.7  Line 4984 of rad 0.771 is an included side branch.  (removed)
     A      X, Y, Z:  4303.16  269.74  2491.86
2.7  Line 5132 of rad 0.75 is an included side branch.  (removed)
     A      X, Y, Z:  4298.24  295.0  2491.86
2.6  Line 1 and line 2165 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  4281.17  303.08  2494.02
2.1  Line 1 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  4281.17  303.08  2494.02
2.1  Line 1303 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  4247.49  299.92  2491.96
2.1  Line 1699 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  4237.73  316.49  2492.74
2.1  Line 2016 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  4265.38  287.76  2491.84
2.1  Line 2829 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  4294.5  270.77  2491.62
2.1  Line 3825 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  4265.03  320.79  2492.12
2.1  Line 3830 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  4264.17  321.16  2492.11
 
 


Number of type A irregularities = 20
Number of type B1 irregularities = 10
Number of type B2 irregularities = 0
Number of type C irregularities = 0
