# Standardization file for C:\Users\karot\Desktop\gaa2ct\data_autoproc\Temp_LMeasure\56-1_S_9_100x_ventral_CA1_apical_2.swc.swc created with StdSwc version 1.31 on 5/6/25.
# Edited SWC file saved as C:\Users\karot\Desktop\gaa2ct\data_autoproc\Temp_LMeasure\56-1_S_9_100x_ventral_CA1_apical_2.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.2  Radius of line 49 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  63.1  -22.46  -8.96
2.4  Seg length ending at pt. 4 >= 6.0 stdevs above mean at 4.5209.  (no action taken)
     B1      X, Y, Z:  57.1  -35.09  -5.06
2.5  Seg length ending at pt. 49 <= 0.1 at 0.07.  (removed)
     A       X, Y, Z:  63.1  -22.46  -8.96
2.5  Seg length ending at pt. 106 <= 0.1 at 0.051.  (removed)
     A       X, Y, Z:  42.23  -23.37  -7.59
2.5  Seg length ending at pt. 138 <= 0.1 at 0.0574.  (removed)
     A       X, Y, Z:  40.25  -30.83  -7.98
2.4  Seg length ending at pt. 273 >= 6.0 stdevs above mean at 6.1924.  (no action taken)
     B1      X, Y, Z:  53.67  -35.78  -7.3
2.4  Seg length ending at pt. 324 >= 6.0 stdevs above mean at 6.06.  (no action taken)
     B1      X, Y, Z:  57.6  -44.71  -6.2
2.5  Seg length ending at pt. 382 <= 0.1 at 0.0927.  (removed)
     A       X, Y, Z:  54.53  -44.1  -4.2
2.5  Seg length ending at pt. 560 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  71.46  -60.82  -6.04
2.4  Seg length ending at pt. 562 >= 6.0 stdevs above mean at 5.6288.  (no action taken)
     B1      X, Y, Z:  64.59  -39.25  -6.0
2.5  Seg length ending at pt. 631 <= 0.1 at 0.0361.  (removed)
     A       X, Y, Z:  76.0  -35.68  -10.97
2.4  Seg length ending at pt. 742 >= 6.0 stdevs above mean at 4.7762.  (no action taken)
     B1      X, Y, Z:  63.78  -38.46  -6.6
2.4  Seg length ending at pt. 787 >= 6.0 stdevs above mean at 4.0038.  (no action taken)
     B1      X, Y, Z:  59.81  -34.92  -6.9
2.5  Seg length ending at pt. 803 <= 0.1 at 0.0632.  (removed)
     A       X, Y, Z:  58.66  -27.74  -4.98
2.5  Seg length ending at pt. 857 <= 0.1 at 0.0927.  (removed)
     A       X, Y, Z:  58.81  -20.28  -5.58
2.5  Seg length ending at pt. 1133 <= 0.1 at 0.0849.  (removed)
     A       X, Y, Z:  75.9  -14.82  -4.5
2.4  Seg length ending at pt. 1166 >= 6.0 stdevs above mean at 5.6424.  (no action taken)
     B1      X, Y, Z:  53.71  -37.39  -5.46
2.4  Seg length ending at pt. 1181 >= 6.0 stdevs above mean at 4.2939.  (no action taken)
     B1      X, Y, Z:  54.74  -39.17  -6.6
2.5  Seg length ending at pt. 1203 <= 0.1 at 0.1.  (removed)
     A       X, Y, Z:  50.64  -46.55  -6.29
2.5  Seg length ending at pt. 1241 <= 0.1 at 0.0224.  (removed)
     A       X, Y, Z:  39.85  -39.21  -4.91
2.4  Seg length ending at pt. 1256 >= 6.0 stdevs above mean at 4.8793.  (no action taken)
     B1      X, Y, Z:  62.56  -40.55  -9.59
2.5  Seg length ending at pt. 1262 <= 0.1 at 0.064.  (removed)
     A       X, Y, Z:  63.57  -41.8  -6.87
2.7  Line 140 of rad 0.285 is an included side branch.  (removed)
     A      X, Y, Z:  39.95  -30.94  -8.24
4.4  Line 55 of rad 0.415 links to 54 of rad 0.115.  (no action taken)
     B1      X, Y, Z:  56.37  -29.24  -8.29
4.4  Line 227 of rad 0.385 links to 226 of rad 0.16.  (no action taken)
     B1      X, Y, Z:  47.67  -25.33  -6.91
4.4  Line 283 of rad 0.215 links to 282 of rad 0.1.  (no action taken)
     B1      X, Y, Z:  49.25  -38.82  -7.0
4.4  Line 288 of rad 0.18 links to 287 of rad 0.085.  (no action taken)
     B1      X, Y, Z:  51.85  -39.25  -7.3
4.4  Line 342 of rad 0.345 links to 341 of rad 0.16.  (no action taken)
     B1      X, Y, Z:  53.06  -50.74  -4.75
4.4  Line 427 of rad 0.3 links to 426 of rad 0.1.  (no action taken)
     B1      X, Y, Z:  58.92  -46.7  -6.74
4.4  Line 451 of rad 0.24 links to 450 of rad 0.115.  (no action taken)
     B1      X, Y, Z:  64.59  -51.89  -5.58
4.4  Line 549 of rad 0.27 links to 548 of rad 0.115.  (no action taken)
     B1      X, Y, Z:  68.37  -59.03  -6.04
4.4  Line 843 of rad 0.23 links to 842 of rad 0.115.  (no action taken)
     B1      X, Y, Z:  61.13  -22.5  -6.25
4.4  Line 859 of rad 0.345 links to 852 of rad 0.11.  (no action taken)
     B1      X, Y, Z:  61.07  -19.58  -5.46
4.4  Line 913 of rad 0.485 links to 912 of rad 0.185.  (no action taken)
     B1      X, Y, Z:  60.88  -29.39  -4.5
4.4  Line 977 of rad 0.26 links to 976 of rad 0.13.  (no action taken)
     B1      X, Y, Z:  79.57  -18.53  -6.29
4.4  Line 1042 of rad 0.26 links to 1041 of rad 0.13.  (no action taken)
     B1      X, Y, Z:  74.43  -20.39  -4.92
4.4  Line 1124 of rad 0.45 links to 1103 of rad 0.13.  (no action taken)
     B1      X, Y, Z:  72.9  -17.39  -4.5
4.4  Line 1252 of rad 0.565 links to 1251 of rad 0.26.  (no action taken)
     B1      X, Y, Z:  43.81  -39.82  -4.79
2.1  Line 1 has 11 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  59.02  -38.84  -6.7
 
 


Number of type A irregularities = 13
Number of type B1 irregularities = 26
Number of type B2 irregularities = 0
Number of type C irregularities = 0
