# Standardization file for C:\Users\karot\Desktop\gaa2ct\data_autoproc\Temp_LMeasure\56-1_S_5_100x_CA1_apical_2.swc.swc created with StdSwc version 1.31 on 5/6/25.
# Edited SWC file saved as C:\Users\karot\Desktop\gaa2ct\data_autoproc\Temp_LMeasure\56-1_S_5_100x_CA1_apical_2.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.2  Radius of line 935 at 0.04 <= 0.05.  (no action taken)
     B1      X, Y, Z:  38.53  -39.8  -4.78
2.4  Seg length ending at pt. 4 >= 6.0 stdevs above mean at 5.0742.  (no action taken)
     B1      X, Y, Z:  63.78  -27.74  -7.16
2.4  Seg length ending at pt. 214 >= 6.0 stdevs above mean at 3.469.  (no action taken)
     B1      X, Y, Z:  65.31  -29.51  -4.5
2.4  Seg length ending at pt. 275 >= 6.0 stdevs above mean at 3.3142.  (no action taken)
     B1      X, Y, Z:  64.37  -29.3  -5.39
2.4  Seg length ending at pt. 366 >= 6.0 stdevs above mean at 2.7006.  (no action taken)
     B1      X, Y, Z:  79.59  -13.46  -5.89
2.4  Seg length ending at pt. 406 >= 6.0 stdevs above mean at 2.7451.  (no action taken)
     B1      X, Y, Z:  63.87  -34.95  -4.48
2.5  Seg length ending at pt. 415 <= 0.1 at 0.01.  (removed)
     A       X, Y, Z:  63.21  -39.28  -4.52
2.5  Seg length ending at pt. 518 <= 0.1 at 0.0374.  (removed)
     A       X, Y, Z:  50.67  -62.99  -3.93
2.5  Seg length ending at pt. 530 <= 0.1 at 0.0656.  (removed)
     A       X, Y, Z:  66.09  -45.6  -2.66
2.5  Seg length ending at pt. 584 <= 0.1 at 0.04.  (removed)
     A       X, Y, Z:  65.73  -58.13  -3.67
2.4  Seg length ending at pt. 822 >= 6.0 stdevs above mean at 2.4998.  (no action taken)
     B1      X, Y, Z:  34.46  -44.92  -5.88
2.5  Seg length ending at pt. 925 <= 0.1 at 0.0374.  (removed)
     A       X, Y, Z:  39.14  -36.45  -5.28
2.5  Seg length ending at pt. 992 <= 0.1 at 0.07.  (removed)
     A       X, Y, Z:  59.75  -52.02  -5.08
2.5  Seg length ending at pt. 1015 <= 0.1 at 0.0787.  (removed)
     A       X, Y, Z:  57.57  -53.41  -4.86
2.4  Seg length ending at pt. 1096 >= 6.0 stdevs above mean at 2.5639.  (no action taken)
     B1      X, Y, Z:  42.93  -59.78  -6.11
2.5  Seg length ending at pt. 1298 <= 0.1 at 0.0332.  (removed)
     A       X, Y, Z:  73.93  -61.09  -7.9
2.4  Seg length ending at pt. 1315 >= 6.0 stdevs above mean at 4.3249.  (no action taken)
     B1      X, Y, Z:  65.82  -36.14  -7.79
2.5  Seg length ending at pt. 1333 <= 0.1 at 0.0632.  (removed)
     A       X, Y, Z:  71.93  -37.68  -7.39
2.5  Seg length ending at pt. 1336 <= 0.1 at 0.0616.  (removed)
     A       X, Y, Z:  71.9  -39.16  -7.69
2.5  Seg length ending at pt. 1349 <= 0.1 at 0.07.  (removed)
     A       X, Y, Z:  67.48  -37.81  -8.09
2.4  Seg length ending at pt. 1351 >= 6.0 stdevs above mean at 3.9385.  (no action taken)
     B1      X, Y, Z:  62.52  -29.39  -7.15
2.4  Seg length ending at pt. 1415 >= 6.0 stdevs above mean at 3.8349.  (no action taken)
     B1      X, Y, Z:  70.85  -12.79  -7.33
2.7  Line 365 of rad 0.265 is an included side branch.  (removed)
     A      X, Y, Z:  77.96  -15.48  -5.96
4.4  Line 196 of rad 0.275 links to 195 of rad 0.13.  (no action taken)
     B1      X, Y, Z:  58.18  -21.46  -5.35
4.4  Line 362 of rad 0.325 links to 361 of rad 0.15.  (no action taken)
     B1      X, Y, Z:  78.17  -16.1  -6.1
4.4  Line 390 of rad 0.32 links to 389 of rad 0.15.  (no action taken)
     B1      X, Y, Z:  62.67  -22.35  -4.93
4.4  Line 410 of rad 0.43 links to 409 of rad 0.155.  (no action taken)
     B1      X, Y, Z:  62.99  -37.8  -4.67
4.4  Line 639 of rad 0.255 links to 638 of rad 0.1.  (no action taken)
     B1      X, Y, Z:  63.17  -75.76  -2.95
4.4  Line 709 of rad 0.255 links to 708 of rad 0.11.  (no action taken)
     B1      X, Y, Z:  57.59  -69.4  -5.68
4.4  Line 843 of rad 0.22 links to 842 of rad 0.11.  (no action taken)
     B1      X, Y, Z:  34.81  -51.96  -5.42
4.4  Line 914 of rad 0.27 links to 913 of rad 0.135.  (no action taken)
     B1      X, Y, Z:  40.85  -36.42  -5.08
4.4  Line 936 of rad 0.165 links to 935 of rad 0.04.  (no action taken)
     B1      X, Y, Z:  38.39  -40.91  -4.78
4.4  Line 1017 of rad 0.38 links to 1008 of rad 0.18.  (no action taken)
     B1      X, Y, Z:  59.88  -52.71  -5.34
4.4  Line 1032 of rad 0.27 links to 1031 of rad 0.11.  (no action taken)
     B1      X, Y, Z:  64.57  -55.23  -5.24
4.4  Line 1285 of rad 0.275 links to 1284 of rad 0.1.  (no action taken)
     B1      X, Y, Z:  71.15  -57.25  -7.51
4.4  Line 1334 of rad 0.265 links to 1332 of rad 0.12.  (no action taken)
     B1      X, Y, Z:  71.96  -38.46  -7.79
4.4  Line 1377 of rad 0.39 links to 1376 of rad 0.165.  (no action taken)
     B1      X, Y, Z:  63.1  -22.46  -7.27
4.4  Line 1388 of rad 0.24 links to 1387 of rad 0.11.  (no action taken)
     B1      X, Y, Z:  67.01  -22.39  -7.75
4.4  Line 1432 of rad 0.36 links to 1431 of rad 0.18.  (no action taken)
     B1      X, Y, Z:  69.4  -7.31  -6.85
2.1  Line 1 has 9 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  64.37  -32.59  -5.79
 
 


Number of type A irregularities = 12
Number of type B1 irregularities = 28
Number of type B2 irregularities = 0
Number of type C irregularities = 0
