# Standardization file for C:\Users\karot\Desktop\gaa2ct\data_autoproc\Temp_LMeasure\53-4_S_3_100x_dorsal_CA1_apical_1.swc.swc created with StdSwc version 1.31 on 5/6/25.
# Edited SWC file saved as C:\Users\karot\Desktop\gaa2ct\data_autoproc\Temp_LMeasure\53-4_S_3_100x_dorsal_CA1_apical_1.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.2  Radius of line 261 at 0.05 <= 0.05.  (no action taken)
     B1      X, Y, Z:  50.82  -39.27  -9.28
4.2  Radius of line 391 at 0.05 <= 0.05.  (no action taken)
     B1      X, Y, Z:  51.6  -28.3  -9.52
4.3  Radius of line 400 at 0.61 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  52.5  -23.01  -9.81
4.3  Radius of line 401 at 0.61 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  52.43  -22.67  -9.57
4.3  Radius of line 402 at 0.56 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  52.37  -22.35  -9.47
4.2  Radius of line 651 at 0.05 <= 0.05.  (no action taken)
     B1      X, Y, Z:  35.71  -37.95  -3.88
4.3  Radius of line 717 at 1.223 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  45.85  -46.84  -10.2
4.2  Radius of line 795 at 0.05 <= 0.05.  (no action taken)
     B1      X, Y, Z:  48.64  -52.84  -5.89
4.2  Radius of line 893 at 0.05 <= 0.05.  (no action taken)
     B1      X, Y, Z:  53.5  -44.32  -11.09
4.2  Radius of line 939 at 0.05 <= 0.05.  (no action taken)
     B1      X, Y, Z:  65.7  -45.28  -12.91
4.2  Radius of line 1090 at 0.05 <= 0.05.  (no action taken)
     B1      X, Y, Z:  69.73  -41.31  -10.2
4.2  Radius of line 1091 at 0.05 <= 0.05.  (no action taken)
     B1      X, Y, Z:  70.01  -40.42  -9.9
4.2  Radius of line 1175 at 0.05 <= 0.05.  (no action taken)
     B1      X, Y, Z:  38.32  -37.32  -11.08
4.2  Radius of line 1176 at 0.05 <= 0.05.  (no action taken)
     B1      X, Y, Z:  37.17  -37.42  -11.08
4.2  Radius of line 1188 at 0.05 <= 0.05.  (no action taken)
     B1      X, Y, Z:  39.17  -38.95  -12.29
4.2  Radius of line 1307 at 0.05 <= 0.05.  (no action taken)
     B1      X, Y, Z:  25.16  -26.39  -10.46
2.4  Seg length ending at pt. 4 >= 6.0 stdevs above mean at 2.4325.  (no action taken)
     B1      X, Y, Z:  51.12  -39.0  -10.66
2.5  Seg length ending at pt. 96 <= 0.1 at 0.08.  (removed)
     A       X, Y, Z:  81.15  -38.0  -13.5
2.5  Seg length ending at pt. 116 <= 0.1 at 0.0616.  (removed)
     A       X, Y, Z:  80.12  -31.71  -12.78
2.4  Seg length ending at pt. 261 >= 6.0 stdevs above mean at 2.1319.  (no action taken)
     B1      X, Y, Z:  50.82  -39.27  -9.28
2.5  Seg length ending at pt. 391 <= 0.1 at 0.05.  (removed)
     A       X, Y, Z:  51.6  -28.3  -9.52
2.5  Seg length ending at pt. 486 <= 0.1 at 0.0245.  (removed)
     A       X, Y, Z:  25.67  -15.82  -4.28
2.5  Seg length ending at pt. 498 <= 0.1 at 0.0954.  (removed)
     A       X, Y, Z:  45.18  -28.73  -8.93
2.5  Seg length ending at pt. 514 <= 0.1 at 0.0906.  (removed)
     A       X, Y, Z:  39.48  -29.16  -9.99
2.5  Seg length ending at pt. 516 <= 0.1 at 0.0714.  (removed)
     A       X, Y, Z:  38.7  -29.08  -10.14
2.4  Seg length ending at pt. 538 >= 6.0 stdevs above mean at 2.1775.  (no action taken)
     B1      X, Y, Z:  28.46  -27.9  -7.08
2.5  Seg length ending at pt. 657 <= 0.1 at 0.099.  (removed)
     A       X, Y, Z:  34.66  -41.07  -5.08
2.5  Seg length ending at pt. 659 <= 0.1 at 0.0755.  (removed)
     A       X, Y, Z:  34.03  -41.27  -4.97
2.4  Seg length ending at pt. 733 >= 6.0 stdevs above mean at 2.2833.  (no action taken)
     B1      X, Y, Z:  42.23  -46.55  -7.49
2.5  Seg length ending at pt. 749 <= 0.1 at 0.086.  (removed)
     A       X, Y, Z:  45.64  -48.57  -5.82
2.5  Seg length ending at pt. 757 <= 0.1 at 0.03.  (removed)
     A       X, Y, Z:  47.56  -50.48  -5.92
2.4  Seg length ending at pt. 886 >= 6.0 stdevs above mean at 2.1234.  (no action taken)
     B1      X, Y, Z:  51.1  -41.85  -12.01
2.4  Seg length ending at pt. 894 >= 6.0 stdevs above mean at 2.1532.  (no action taken)
     B1      X, Y, Z:  55.23  -45.6  -11.16
2.5  Seg length ending at pt. 939 <= 0.1 at 0.0721.  (removed)
     A       X, Y, Z:  65.7  -45.28  -12.91
2.5  Seg length ending at pt. 1001 <= 0.1 at 0.0245.  (removed)
     A       X, Y, Z:  58.67  -51.59  -11.0
2.4  Seg length ending at pt. 1213 >= 6.0 stdevs above mean at 2.3211.  (no action taken)
     B1      X, Y, Z:  30.23  -42.1  -10.79
2.5  Seg length ending at pt. 1237 <= 0.1 at 0.0374.  (removed)
     A       X, Y, Z:  22.92  -35.91  -8.06
2.5  Seg length ending at pt. 1353 <= 0.1 at 0.099.  (removed)
     A       X, Y, Z:  31.26  -37.57  -11.66
2.5  Seg length ending at pt. 1361 <= 0.1 at 0.0866.  (removed)
     A       X, Y, Z:  32.49  -39.42  -11.71
2.5  Seg length ending at pt. 1463 <= 0.1 at 0.08.  (removed)
     A       X, Y, Z:  8.02  -39.1  -8.05
2.5  Seg length ending at pt. 1468 <= 0.1 at 0.0412.  (removed)
     A       X, Y, Z:  6.49  -39.84  -7.94
2.5  Seg length ending at pt. 1499 <= 0.1 at 0.0671.  (removed)
     A       X, Y, Z:  41.57  -38.7  -12.03
2.4  Seg length ending at pt. 1506 >= 6.0 stdevs above mean at 2.265.  (no action taken)
     B1      X, Y, Z:  39.92  -42.75  -12.89
2.7  Line 1096 of rad 0.19 is an included side branch.  (removed)
     A      X, Y, Z:  70.85  -40.0  -10.59
4.4  Line 94 of rad 0.305 links to 93 of rad 0.15.  (no action taken)
     B1      X, Y, Z:  80.78  -37.64  -14.4
4.4  Line 176 of rad 0.21 links to 175 of rad 0.1.  (no action taken)
     B1      X, Y, Z:  75.67  -21.87  -7.51
4.4  Line 183 of rad 0.24 links to 182 of rad 0.1.  (no action taken)
     B1      X, Y, Z:  76.57  -18.89  -8.39
4.4  Line 229 of rad 0.27 links to 228 of rad 0.13.  (no action taken)
     B1      X, Y, Z:  78.4  -10.75  -8.13
4.4  Line 262 of rad 0.19 links to 261 of rad 0.05.  (no action taken)
     B1      X, Y, Z:  50.73  -38.84  -9.28
4.4  Line 324 of rad 0.21 links to 323 of rad 0.1.  (no action taken)
     B1      X, Y, Z:  62.1  -29.39  -4.48
4.4  Line 400 of rad 0.61 links to 399 of rad 0.275.  (no action taken)
     B1      X, Y, Z:  52.5  -23.01  -9.81
4.4  Line 407 of rad 0.26 links to 406 of rad 0.115.  (no action taken)
     B1      X, Y, Z:  47.2  -30.65  -9.27
4.4  Line 421 of rad 0.33 links to 420 of rad 0.16.  (no action taken)
     B1      X, Y, Z:  46.91  -25.55  -7.74
4.4  Line 432 of rad 0.29 links to 431 of rad 0.1.  (no action taken)
     B1      X, Y, Z:  43.34  -22.76  -7.46
4.4  Line 438 of rad 0.26 links to 437 of rad 0.13.  (no action taken)
     B1      X, Y, Z:  41.53  -22.6  -5.98
4.4  Line 471 of rad 0.44 links to 470 of rad 0.11.  (no action taken)
     B1      X, Y, Z:  30.32  -18.3  -4.87
4.4  Line 650 of rad 0.345 links to 649 of rad 0.145.  (no action taken)
     B1      X, Y, Z:  36.18  -38.85  -3.99
4.4  Line 652 of rad 0.31 links to 648 of rad 0.145.  (no action taken)
     B1      X, Y, Z:  35.74  -39.42  -4.48
4.4  Line 685 of rad 0.37 links to 684 of rad 0.145.  (no action taken)
     B1      X, Y, Z:  48.28  -44.89  -8.97
4.4  Line 717 of rad 1.223 links to 716 of rad 0.155.  (no action taken)
     B1      X, Y, Z:  45.85  -46.84  -10.2
4.4  Line 736 of rad 0.235 links to 735 of rad 0.11.  (no action taken)
     B1      X, Y, Z:  42.64  -47.59  -7.64
4.4  Line 750 of rad 0.32 links to 748 of rad 0.1.  (no action taken)
     B1      X, Y, Z:  45.89  -48.92  -5.59
4.4  Line 796 of rad 0.12 links to 795 of rad 0.05.  (no action taken)
     B1      X, Y, Z:  47.85  -52.71  -5.89
4.4  Line 800 of rad 0.245 links to 799 of rad 0.11.  (no action taken)
     B1      X, Y, Z:  47.03  -53.06  -4.86
4.4  Line 808 of rad 0.205 links to 807 of rad 0.1.  (no action taken)
     B1      X, Y, Z:  46.67  -54.03  -4.43
4.4  Line 894 of rad 0.375 links to 893 of rad 0.05.  (no action taken)
     B1      X, Y, Z:  55.23  -45.6  -11.16
4.4  Line 921 of rad 0.145 links to 920 of rad 0.07.  (no action taken)
     B1      X, Y, Z:  64.6  -43.57  -12.62
4.4  Line 940 of rad 0.44 links to 938 of rad 0.14.  (no action taken)
     B1      X, Y, Z:  66.45  -45.23  -12.47
4.4  Line 1092 of rad 0.13 links to 1091 of rad 0.05.  (no action taken)
     B1      X, Y, Z:  69.6  -40.0  -10.08
4.4  Line 1134 of rad 0.305 links to 1133 of rad 0.15.  (no action taken)
     B1      X, Y, Z:  47.39  -36.74  -11.73
4.4  Line 1155 of rad 0.26 links to 1154 of rad 0.1.  (no action taken)
     B1      X, Y, Z:  39.63  -37.25  -11.15
4.4  Line 1177 of rad 0.205 links to 1176 of rad 0.05.  (no action taken)
     B1      X, Y, Z:  36.53  -37.34  -10.84
4.4  Line 1189 of rad 0.31 links to 1188 of rad 0.05.  (no action taken)
     B1      X, Y, Z:  38.59  -40.21  -12.4
4.4  Line 1211 of rad 0.5 links to 1210 of rad 0.21.  (no action taken)
     B1      X, Y, Z:  31.97  -43.05  -11.68
4.4  Line 1214 of rad 0.155 links to 1213 of rad 0.07.  (no action taken)
     B1      X, Y, Z:  29.94  -42.1  -10.76
4.4  Line 1308 of rad 0.245 links to 1307 of rad 0.05.  (no action taken)
     B1      X, Y, Z:  25.12  -26.44  -10.64
4.4  Line 1346 of rad 0.41 links to 1345 of rad 0.11.  (no action taken)
     B1      X, Y, Z:  29.74  -36.02  -11.96
4.4  Line 1375 of rad 0.31 links to 1374 of rad 0.15.  (no action taken)
     B1      X, Y, Z:  27.1  -42.6  -11.5
4.4  Line 1523 of rad 0.26 links to 1513 of rad 0.11.  (no action taken)
     B1      X, Y, Z:  39.14  -45.71  -12.58
4.4  Line 1613 of rad 0.345 links to 1612 of rad 0.1.  (no action taken)
     B1      X, Y, Z:  46.78  -28.53  -13.01
2.1  Line 1 has 3 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  49.67  -40.45  -11.3
 
 


Number of type A irregularities = 20
Number of type B1 irregularities = 61
Number of type B2 irregularities = 0
Number of type C irregularities = 0
