# Standardization file for C:\Users\karot\Desktop\gaa2ct\data_autoproc\Temp_LMeasure\51-7_S_3_100x_dorsal_CA1_apical_1.swc.swc created with StdSwc version 1.31 on 5/6/25.
# Edited SWC file saved as C:\Users\karot\Desktop\gaa2ct\data_autoproc\Temp_LMeasure\51-7_S_3_100x_dorsal_CA1_apical_1.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.2  Radius of line 635 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  48.02  -29.58  -4.48
4.2  Radius of line 705 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  48.06  -29.85  -4.77
4.2  Radius of line 964 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  78.93  -56.05  -9.58
4.2  Radius of line 1040 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  53.28  -26.56  -6.88
4.2  Radius of line 1549 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  58.95  -43.7  -9.87
2.4  Seg length ending at pt. 3 >= 6.0 stdevs above mean at 3.5879.  (no action taken)
     B1      X, Y, Z:  48.31  -28.66  -6.28
2.4  Seg length ending at pt. 23 >= 6.0 stdevs above mean at 3.1058.  (no action taken)
     B1      X, Y, Z:  50.62  -29.17  -5.7
2.4  Seg length ending at pt. 101 >= 6.0 stdevs above mean at 3.633.  (no action taken)
     B1      X, Y, Z:  47.61  -29.37  -6.58
2.5  Seg length ending at pt. 122 <= 0.1 at 0.0755.  (removed)
     A       X, Y, Z:  46.13  -21.67  -7.91
2.5  Seg length ending at pt. 194 <= 0.1 at 0.03.  (removed)
     A       X, Y, Z:  30.85  -41.46  -9.81
2.4  Seg length ending at pt. 279 >= 6.0 stdevs above mean at 3.4719.  (no action taken)
     B1      X, Y, Z:  50.7  -35.32  -5.39
2.5  Seg length ending at pt. 444 <= 0.1 at 0.0922.  (removed)
     A       X, Y, Z:  44.02  -69.51  -9.36
2.5  Seg length ending at pt. 565 <= 0.1 at 0.0458.  (removed)
     A       X, Y, Z:  24.25  -43.55  -4.98
2.5  Seg length ending at pt. 580 <= 0.1 at 0.0877.  (removed)
     A       X, Y, Z:  22.67  -41.57  -6.41
2.4  Seg length ending at pt. 635 >= 6.0 stdevs above mean at 3.5337.  (no action taken)
     B1      X, Y, Z:  48.02  -29.58  -4.48
2.4  Seg length ending at pt. 705 >= 6.0 stdevs above mean at 3.6149.  (no action taken)
     B1      X, Y, Z:  48.06  -29.85  -4.77
2.4  Seg length ending at pt. 743 >= 6.0 stdevs above mean at 3.5897.  (no action taken)
     B1      X, Y, Z:  51.32  -34.99  -6.58
2.4  Seg length ending at pt. 985 >= 6.0 stdevs above mean at 2.7312.  (no action taken)
     B1      X, Y, Z:  47.31  -33.89  -6.29
2.4  Seg length ending at pt. 1020 >= 6.0 stdevs above mean at 3.2681.  (no action taken)
     B1      X, Y, Z:  52.07  -33.78  -6.28
2.5  Seg length ending at pt. 1062 <= 0.1 at 0.08.  (removed)
     A       X, Y, Z:  52.32  -17.92  -9.88
2.5  Seg length ending at pt. 1156 <= 0.1 at 0.0825.  (removed)
     A       X, Y, Z:  55.17  -26.69  -6.82
2.4  Seg length ending at pt. 1174 >= 6.0 stdevs above mean at 3.5074.  (no action taken)
     B1      X, Y, Z:  52.21  -33.45  -5.99
2.5  Seg length ending at pt. 1191 <= 0.1 at 0.07.  (removed)
     A       X, Y, Z:  57.81  -30.78  -6.02
2.5  Seg length ending at pt. 1317 <= 0.1 at 0.07.  (removed)
     A       X, Y, Z:  55.82  -32.35  -6.29
2.4  Seg length ending at pt. 1348 >= 6.0 stdevs above mean at 3.6836.  (no action taken)
     B1      X, Y, Z:  51.53  -34.52  -7.17
2.4  Seg length ending at pt. 1646 >= 6.0 stdevs above mean at 3.5696.  (no action taken)
     B1      X, Y, Z:  52.67  -32.75  -8.99
2.4  Seg length ending at pt. 1655 >= 6.0 stdevs above mean at 3.4026.  (no action taken)
     B1      X, Y, Z:  46.73  -33.98  -9.87
2.5  Seg length ending at pt. 1663 <= 0.1 at 0.0787.  (removed)
     A       X, Y, Z:  45.14  -33.21  -8.72
2.7  Line 854 of rad 0.215 is an included side branch.  (removed)
     A      X, Y, Z:  57.96  -48.27  -6.58
4.4  Line 6 of rad 0.23 links to 5 of rad 0.11.  (no action taken)
     B1      X, Y, Z:  48.95  -27.28  -5.98
4.4  Line 320 of rad 0.36 links to 319 of rad 0.13.  (no action taken)
     B1      X, Y, Z:  49.12  -40.0  -7.58
4.4  Line 391 of rad 0.22 links to 390 of rad 0.11.  (no action taken)
     B1      X, Y, Z:  41.07  -53.53  -9.2
4.4  Line 636 of rad 0.26 links to 635 of rad 0.045.  (no action taken)
     B1      X, Y, Z:  48.13  -28.65  -4.62
4.4  Line 706 of rad 0.185 links to 705 of rad 0.045.  (no action taken)
     B1      X, Y, Z:  48.1  -29.08  -4.77
4.4  Line 965 of rad 0.215 links to 964 of rad 0.045.  (no action taken)
     B1      X, Y, Z:  79.46  -54.62  -9.58
4.4  Line 1041 of rad 0.24 links to 1040 of rad 0.045.  (no action taken)
     B1      X, Y, Z:  52.96  -25.57  -6.88
4.4  Line 1294 of rad 0.22 links to 1293 of rad 0.11.  (no action taken)
     B1      X, Y, Z:  60.67  -23.12  -4.79
4.4  Line 1550 of rad 0.335 links to 1549 of rad 0.045.  (no action taken)
     B1      X, Y, Z:  59.25  -43.91  -9.87
4.4  Line 1573 of rad 0.255 links to 1549 of rad 0.045.  (no action taken)
     B1      X, Y, Z:  59.41  -43.71  -8.26
2.1  Line 1 has 5 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  49.31  -32.03  -6.29
 
 


Number of type A irregularities = 11
Number of type B1 irregularities = 29
Number of type B2 irregularities = 0
Number of type C irregularities = 0
