# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\cell-60-TX_RV_Biocytin_S5_16603_25x-ims.swc.swc created with StdSwc version 1.31 on 4/30/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\cell-60-TX_RV_Biocytin_S5_16603_25x-ims.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  200.58  206.52  13.21
4.3  Radius of line 2 at 1.75601 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  200.07  207.21  13.77
4.3  Radius of line 3 at 1.75601 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  199.56  207.9  14.34
4.3  Radius of line 245 at 1.75601 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  200.58  206.52  13.21
4.3  Radius of line 489 at 1.75601 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  200.58  206.52  13.21
4.3  Radius of line 490 at 1.75601 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  200.88  205.76  12.44
4.3  Radius of line 491 at 1.75601 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  202.45  203.64  11.58
4.3  Radius of line 492 at 1.75601 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  203.33  202.16  11.04
4.3  Radius of line 497 at 1.75601 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  200.58  206.52  13.21
4.3  Radius of line 2180 at 1.75601 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  202.19  202.6  8.66
4.3  Radius of line 2181 at 1.75601 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  201.65  203.73  8.26
4.3  Radius of line 2182 at 1.75601 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  201.0  204.8  7.81
4.3  Radius of line 2183 at 1.75601 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  199.96  206.08  7.26
4.3  Radius of line 2184 at 1.75601 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  198.25  207.87  6.54
4.3  Radius of line 2185 at 1.75601 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  197.26  209.93  6.3
4.3  Radius of line 2186 at 1.75601 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  196.54  211.37  5.95
4.3  Radius of line 2187 at 1.75601 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  195.85  212.42  5.52
2.4  Seg length ending at pt. 4 >= 6.0 stdevs above mean at 2.2769.  (no action taken)
     B1      X, Y, Z:  198.32  209.28  15.66
2.5  Seg length ending at pt. 489 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  200.58  206.52  13.21
2.4  Seg length ending at pt. 491 >= 6.0 stdevs above mean at 2.7747.  (no action taken)
     B1      X, Y, Z:  202.45  203.64  11.58
2.4  Seg length ending at pt. 497 >= 6.0 stdevs above mean at 7.7123.  (no action taken)
     B1      X, Y, Z:  200.58  206.52  13.21
2.4  Seg length ending at pt. 498 >= 6.0 stdevs above mean at 2.2143.  (no action taken)
     B1      X, Y, Z:  199.59  208.5  13.16
2.5  Seg length ending at pt. 1248 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  189.33  158.37  24.49
2.4  Seg length ending at pt. 1599 >= 6.0 stdevs above mean at 2.1118.  (no action taken)
     B1      X, Y, Z:  183.33  150.42  31.43
2.5  Seg length ending at pt. 1790 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  189.33  158.37  24.49
2.4  Seg length ending at pt. 1797 >= 6.0 stdevs above mean at 2.1641.  (no action taken)
     B1      X, Y, Z:  184.22  156.74  27.64
2.4  Seg length ending at pt. 2184 >= 6.0 stdevs above mean at 2.5781.  (no action taken)
     B1      X, Y, Z:  198.25  207.87  6.54
2.4  Seg length ending at pt. 2185 >= 6.0 stdevs above mean at 2.2981.  (no action taken)
     B1      X, Y, Z:  197.26  209.93  6.3
2.5  Seg length ending at pt. 2214 <= 0.1 at 0.0283.  (removed)
     A       X, Y, Z:  188.29  228.57  4.74
2.4  Seg length ending at pt. 2219 >= 6.0 stdevs above mean at 2.2485.  (no action taken)
     B1      X, Y, Z:  183.68  232.25  3.4
2.5  Seg length ending at pt. 2307 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  188.27  228.55  4.74
2.6  Line 1 and line 245 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  200.58  206.52  13.21
2.6  Line 1 and line 497 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  200.58  206.52  13.21
2.6  Line 245 and line 497 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  200.58  206.52  13.21
2.6  Line 767 and line 1161 have the same coordinates.  (second line removed)
     A      X, Y, Z:  208.0  189.03  11.2
2.6  Line 952 and line 1055 have the same coordinates.  (second line removed)
     A      X, Y, Z:  94.71  210.08  45.97
2.6  Line 1261 and line 1599 have the same coordinates.  (second line removed)
     A      X, Y, Z:  183.93  151.92  30.07
2.6  Line 1349 and line 1455 have the same coordinates.  (second line removed)
     A      X, Y, Z:  137.27  167.64  64.18
2.6  Line 1950 and line 2069 have the same coordinates.  (second line removed)
     A      X, Y, Z:  89.87  162.37  69.04
4.4  Line 497 of rad 1.75601 links to 496 of rad 0.58107.  (no action taken)
     B1      X, Y, Z:  200.58  206.52  13.21
 
 


Number of type A irregularities = 10
Number of type B1 irregularities = 30
Number of type B2 irregularities = 0
Number of type C irregularities = 0
