# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\cell-58-16603_S1_25x-ims.swc.swc created with StdSwc version 1.31 on 4/30/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\cell-58-16603_S1_25x-ims.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  246.44  159.12  13.16
4.3  Radius of line 2223 at 1.5399 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  227.68  107.66  7.15
4.3  Radius of line 2224 at 1.5399 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  227.7  106.87  7.43
4.3  Radius of line 2225 at 1.5399 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  227.7  106.06  7.57
4.3  Radius of line 2226 at 1.5399 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  227.71  105.23  7.63
4.3  Radius of line 2227 at 1.5399 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  227.71  104.41  7.65
4.3  Radius of line 2228 at 1.5399 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  227.71  103.59  7.66
4.3  Radius of line 2229 at 1.5399 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  227.71  102.76  7.67
4.3  Radius of line 2230 at 1.5399 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  227.71  101.94  7.67
4.3  Radius of line 2231 at 1.5399 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  227.71  101.12  7.67
4.3  Radius of line 2232 at 1.5399 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  227.71  100.29  7.67
4.3  Radius of line 2233 at 1.5399 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  227.71  99.47  7.67
4.3  Radius of line 2234 at 1.5399 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  227.71  98.65  7.67
4.3  Radius of line 2235 at 1.5399 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  227.71  97.82  7.67
4.3  Radius of line 2236 at 1.5399 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  227.71  97.0  7.67
4.3  Radius of line 2237 at 1.5399 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  227.71  96.18  7.67
4.3  Radius of line 2238 at 1.5399 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  227.71  95.35  7.67
4.3  Radius of line 2239 at 1.5399 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  227.69  94.22  7.58
2.5  Seg length ending at pt. 22 <= 0.1 at 0.0361.  (removed)
     A       X, Y, Z:  255.53  169.81  17.88
2.5  Seg length ending at pt. 142 <= 0.1 at 0.0361.  (removed)
     A       X, Y, Z:  255.53  169.81  17.88
2.4  Seg length ending at pt. 613 >= 6.0 stdevs above mean at 2.2477.  (no action taken)
     B1      X, Y, Z:  249.23  168.31  12.25
2.4  Seg length ending at pt. 800 >= 6.0 stdevs above mean at 2.3102.  (no action taken)
     B1      X, Y, Z:  227.69  243.68  24.74
2.4  Seg length ending at pt. 918 >= 6.0 stdevs above mean at 2.2718.  (no action taken)
     B1      X, Y, Z:  218.68  258.64  28.78
2.5  Seg length ending at pt. 966 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  246.44  159.12  13.16
2.4  Seg length ending at pt. 996 >= 6.0 stdevs above mean at 2.2659.  (no action taken)
     B1      X, Y, Z:  234.21  134.38  9.68
2.4  Seg length ending at pt. 997 >= 6.0 stdevs above mean at 5.6447.  (no action taken)
     B1      X, Y, Z:  234.3  139.94  8.71
2.5  Seg length ending at pt. 998 <= 0.1 at 0.0224.  (removed)
     A       X, Y, Z:  234.32  139.95  8.71
2.4  Seg length ending at pt. 1201 >= 6.0 stdevs above mean at 2.5596.  (no action taken)
     B1      X, Y, Z:  198.22  296.84  33.14
2.4  Seg length ending at pt. 1260 >= 6.0 stdevs above mean at 2.9543.  (no action taken)
     B1      X, Y, Z:  196.24  291.17  29.79
2.4  Seg length ending at pt. 1303 >= 6.0 stdevs above mean at 2.3267.  (no action taken)
     B1      X, Y, Z:  191.55  215.47  14.64
2.5  Seg length ending at pt. 1469 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  234.3  139.94  8.71
2.4  Seg length ending at pt. 1779 >= 6.0 stdevs above mean at 2.3121.  (no action taken)
     B1      X, Y, Z:  351.38  317.89  15.31
2.4  Seg length ending at pt. 1780 >= 6.0 stdevs above mean at 2.3152.  (no action taken)
     B1      X, Y, Z:  351.4  320.18  15.65
2.4  Seg length ending at pt. 1880 >= 6.0 stdevs above mean at 3.0647.  (no action taken)
     B1      X, Y, Z:  188.28  174.53  23.13
2.4  Seg length ending at pt. 1975 >= 6.0 stdevs above mean at 2.3482.  (no action taken)
     B1      X, Y, Z:  125.44  214.62  46.89
2.4  Seg length ending at pt. 2095 >= 6.0 stdevs above mean at 2.8309.  (no action taken)
     B1      X, Y, Z:  137.72  228.34  58.43
2.4  Seg length ending at pt. 2118 >= 6.0 stdevs above mean at 2.9841.  (no action taken)
     B1      X, Y, Z:  190.34  175.61  23.99
2.5  Seg length ending at pt. 999 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  234.3  139.94  8.71
2.7  Line 965 of rad 0.368639 is an included side branch.  (removed)
     A      X, Y, Z:  246.44  159.12  13.16
2.6  Line 708 and line 800 have the same coordinates.  (second line removed)
     A      X, Y, Z:  229.31  242.18  24.06
2.6  Line 818 and line 918 have the same coordinates.  (second line removed)
     A      X, Y, Z:  220.16  257.0  28.25
2.6  Line 996 and line 1794 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  234.21  134.38  9.68
2.6  Line 1096 and line 1301 have the same coordinates.  (second line removed)
     A      X, Y, Z:  194.1  212.72  15.65
2.6  Line 1192 and line 1260 have the same coordinates.  (second line removed)
     A      X, Y, Z:  196.66  288.31  30.4
2.6  Line 1737 and line 1779 have the same coordinates.  (second line removed)
     A      X, Y, Z:  351.03  315.63  14.97
2.6  Line 1807 and line 2205 have the same coordinates.  (second line removed)
     A      X, Y, Z:  229.98  125.07  9.59
2.6  Line 1879 and line 2118 have the same coordinates.  (second line removed)
     A      X, Y, Z:  190.67  172.67  23.6
2.6  Line 1968 and line 2065 have the same coordinates.  (second line removed)
     A      X, Y, Z:  131.47  210.65  46.3
4.4  Line 613 of rad 0.368639 links to 612 of rad 0.171973.  (no action taken)
     B1      X, Y, Z:  249.23  168.31  12.25
4.4  Line 989 of rad 0.956155 links to 988 of rad 0.0882495.  (no action taken)
     B1      X, Y, Z:  237.55  140.34  11.44
4.4  Line 1104 of rad 0.368639 links to 1103 of rad 0.171973.  (no action taken)
     B1      X, Y, Z:  191.68  219.83  16.37
4.4  Line 1794 of rad 0.956155 links to 1793 of rad 0.368639.  (no action taken)
     B1      X, Y, Z:  234.21  134.38  9.68
4.4  Line 1975 of rad 0.368639 links to 1974 of rad 0.142127.  (no action taken)
     B1      X, Y, Z:  125.44  214.62  46.89
4.4  Line 2207 of rad 0.956155 links to 2206 of rad 0.251785.  (no action taken)
     B1      X, Y, Z:  228.97  121.09  9.03
2.1  Line 997 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  234.3  139.94  8.71
 
 


Number of type A irregularities = 15
Number of type B1 irregularities = 40
Number of type B2 irregularities = 0
Number of type C irregularities = 0
