# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\cell-108-16519_S4_NoBiocytin_25x-ims.swc.swc created with StdSwc version 1.31 on 4/30/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\cell-108-16519_S4_NoBiocytin_25x-ims.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  153.57  114.87  93.34
2.5  Seg length ending at pt. 301 <= 0.1 at 0.0245.  (removed)
     A       X, Y, Z:  153.59  114.88  93.35
2.4  Seg length ending at pt. 682 >= 6.0 stdevs above mean at 100.5282.  (no action taken)
     B1      X, Y, Z:  153.57  114.87  93.34
2.5  Seg length ending at pt. 814 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  117.69  136.23  79.42
2.4  Seg length ending at pt. 1329 >= 6.0 stdevs above mean at 9.1743.  (no action taken)
     B1      X, Y, Z:  68.81  132.34  60.26
2.4  Seg length ending at pt. 1357 >= 6.0 stdevs above mean at 9.1743.  (no action taken)
     B1      X, Y, Z:  77.73  133.93  61.7
2.5  Seg length ending at pt. 2689 <= 0.1 at 0.01.  (removed)
     A       X, Y, Z:  224.69  122.68  35.32
2.4  Seg length ending at pt. 3469 >= 6.0 stdevs above mean at 4.5075.  (no action taken)
     B1      X, Y, Z:  91.8  131.02  60.81
2.4  Seg length ending at pt. 3470 >= 6.0 stdevs above mean at 3.8476.  (no action taken)
     B1      X, Y, Z:  94.7  128.52  61.19
2.5  Seg length ending at pt. 3831 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  209.01  95.74  64.59
2.4  Seg length ending at pt. 3916 >= 6.0 stdevs above mean at 1.7975.  (no action taken)
     B1      X, Y, Z:  235.72  103.88  61.68
2.5  Seg length ending at pt. 3978 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  209.01  95.74  64.59
2.4  Seg length ending at pt. 4554 >= 6.0 stdevs above mean at 3.5918.  (no action taken)
     B1      X, Y, Z:  94.37  128.53  61.12
2.6  Line 1 and line 682 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  153.57  114.87  93.34
2.6  Line 557 and line 612 have the same coordinates.  (second line removed)
     A      X, Y, Z:  236.13  80.07  100.18
2.6  Line 1328 and line 1356 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  77.73  133.93  61.7
2.6  Line 1328 and line 1357 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  77.73  133.93  61.7
2.6  Line 1356 and line 1357 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  77.73  133.93  61.7
2.6  Line 1384 and line 3459 have the same coordinates.  (second line removed)
     A      X, Y, Z:  88.58  134.15  60.42
2.6  Line 1462 and line 2326 have the same coordinates.  (second line removed)
     A      X, Y, Z:  112.82  139.38  58.5
2.6  Line 1595 and line 2048 have the same coordinates.  (second line removed)
     A      X, Y, Z:  141.91  173.2  51.45
2.6  Line 2400 and line 3060 have the same coordinates.  (second line removed)
     A      X, Y, Z:  136.36  135.39  57.0
2.6  Line 2566 and line 2790 have the same coordinates.  (second line removed)
     A      X, Y, Z:  188.41  138.09  44.9
2.6  Line 3468 and line 4554 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  94.37  128.53  61.12
2.6  Line 3719 and line 4119 have the same coordinates.  (second line removed)
     A      X, Y, Z:  170.71  94.93  62.62
2.6  Line 4145 and line 4335 have the same coordinates.  (second line removed)
     A      X, Y, Z:  178.3  90.66  63.67
4.4  Line 1328 of rad 1.44432 links to 1327 of rad 0.460205.  (no action taken)
     B1      X, Y, Z:  77.73  133.93  61.7
4.4  Line 2573 of rad 0.89681 links to 2572 of rad 0.285751.  (no action taken)
     B1      X, Y, Z:  190.57  137.63  44.22
4.4  Line 2784 of rad 0.89681 links to 2783 of rad 0.259773.  (no action taken)
     B1      X, Y, Z:  238.86  116.25  34.83
4.4  Line 2796 of rad 0.89681 links to 2795 of rad 0.285751.  (no action taken)
     B1      X, Y, Z:  191.01  139.76  44.7
4.4  Line 3068 of rad 0.89681 links to 3067 of rad 0.285751.  (no action taken)
     B1      X, Y, Z:  138.36  134.0  57.2
4.4  Line 3840 of rad 0.56616 links to 3839 of rad 0.236158.  (no action taken)
     B1      X, Y, Z:  211.13  96.35  63.93
4.4  Line 3990 of rad 0.89681 links to 3989 of rad 0.418368.  (no action taken)
     B1      X, Y, Z:  213.41  94.98  65.94
4.4  Line 4123 of rad 0.89681 links to 4122 of rad 0.418368.  (no action taken)
     B1      X, Y, Z:  172.42  93.72  63.13
 
 


Number of type A irregularities = 13
Number of type B1 irregularities = 21
Number of type B2 irregularities = 0
Number of type C irregularities = 0
