# Standardization file for C:\Users\Carolina\Desktop\gaa2ct\data_autoproc\Temp_LMeasure\Animal_7_Basal_6.swc.swc created with StdSwc version 1.31 on 5/17/22.
# Edited SWC file saved as C:\Users\Carolina\Desktop\gaa2ct\data_autoproc\Temp_LMeasure\Animal_7_Basal_6.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  285.29  211.5  6.14
4.3  Radius of line 2 at 6.287 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  285.22  211.46  6.19
4.3  Radius of line 3 at 6.287 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  285.15  211.42  6.24
4.3  Radius of line 4 at 6.287 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  285.01  211.33  6.34
4.3  Radius of line 1947 at 24.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  285.29  211.5  6.14
4.3  Radius of line 1948 at 9.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  284.68  211.39  6.37
4.3  Radius of line 5781 at 24.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  285.29  211.5  6.14
4.3  Radius of line 5782 at 9.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  284.78  212.01  6.38
4.3  Radius of line 6073 at 24.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  285.29  211.5  6.14
4.3  Radius of line 6074 at 9.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  284.75  211.84  6.38
2.5  Seg length ending at pt. 2 <= 0.1 at 0.0949.  (removed)
     A       X, Y, Z:  285.22  211.46  6.19
2.4  Seg length ending at pt. 1590 >= 6.0 stdevs above mean at 0.5039.  (no action taken)
     B1      X, Y, Z:  169.4  162.22  2.74
2.4  Seg length ending at pt. 1948 >= 6.0 stdevs above mean at 0.6611.  (no action taken)
     B1      X, Y, Z:  284.68  211.39  6.37
2.4  Seg length ending at pt. 1949 >= 6.0 stdevs above mean at 0.458.  (no action taken)
     B1      X, Y, Z:  284.24  211.3  6.46
2.4  Seg length ending at pt. 2966 >= 6.0 stdevs above mean at 0.4805.  (no action taken)
     B1      X, Y, Z:  121.92  212.41  2.05
2.4  Seg length ending at pt. 3332 >= 6.0 stdevs above mean at 0.4753.  (no action taken)
     B1      X, Y, Z:  146.19  218.19  2.39
2.5  Seg length ending at pt. 5781 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  285.29  211.5  6.14
2.4  Seg length ending at pt. 5782 >= 6.0 stdevs above mean at 0.7601.  (no action taken)
     B1      X, Y, Z:  284.78  212.01  6.38
2.4  Seg length ending at pt. 5783 >= 6.0 stdevs above mean at 0.4721.  (no action taken)
     B1      X, Y, Z:  284.46  212.35  6.45
2.5  Seg length ending at pt. 6073 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  285.29  211.5  6.14
2.4  Seg length ending at pt. 6074 >= 6.0 stdevs above mean at 0.6818.  (no action taken)
     B1      X, Y, Z:  284.75  211.84  6.38
2.6  Line 1 and line 1947 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  285.29  211.5  6.14
2.6  Line 207 and line 1745 have the same coordinates.  (second line removed)
     A      X, Y, Z:  237.7  182.41  3.12
2.6  Line 349 and line 1640 have the same coordinates.  (second line removed)
     A      X, Y, Z:  198.3  171.57  3.39
2.6  Line 454 and line 1590 have the same coordinates.  (second line removed)
     A      X, Y, Z:  169.73  162.59  2.65
2.6  Line 594 and line 1251 have the same coordinates.  (second line removed)
     A      X, Y, Z:  141.99  136.16  3.91
2.6  Line 636 and line 974 have the same coordinates.  (second line removed)
     A      X, Y, Z:  131.31  132.05  2.61
2.6  Line 1952 and line 5656 have the same coordinates.  (second line removed)
     A      X, Y, Z:  283.58  211.24  6.46
2.6  Line 1979 and line 4735 have the same coordinates.  (second line removed)
     A      X, Y, Z:  275.83  211.77  6.45
2.6  Line 2206 and line 4301 have the same coordinates.  (second line removed)
     A      X, Y, Z:  212.73  224.4  2.66
2.6  Line 2225 and line 3951 have the same coordinates.  (second line removed)
     A      X, Y, Z:  207.43  224.75  2.28
2.6  Line 2428 and line 3676 have the same coordinates.  (second line removed)
     A      X, Y, Z:  149.06  218.37  2.6
2.6  Line 2437 and line 3332 have the same coordinates.  (second line removed)
     A      X, Y, Z:  146.66  218.12  2.38
2.6  Line 2441 and line 3209 have the same coordinates.  (second line removed)
     A      X, Y, Z:  145.85  217.97  2.33
2.6  Line 2524 and line 2966 have the same coordinates.  (second line removed)
     A      X, Y, Z:  122.36  212.59  2.12
2.6  Line 2562 and line 2865 have the same coordinates.  (second line removed)
     A      X, Y, Z:  112.9  218.1  2.36
2.6  Line 2727 and line 2816 have the same coordinates.  (second line removed)
     A      X, Y, Z:  68.12  226.9  2.42
2.6  Line 3214 and line 3286 have the same coordinates.  (second line removed)
     A      X, Y, Z:  144.63  216.99  2.39
2.6  Line 4428 and line 4664 have the same coordinates.  (second line removed)
     A      X, Y, Z:  190.62  249.34  5.65
2.6  Line 4938 and line 5235 have the same coordinates.  (second line removed)
     A      X, Y, Z:  220.0  198.0  2.57
2.6  Line 5301 and line 5484 have the same coordinates.  (second line removed)
     A      X, Y, Z:  200.65  197.5  1.67
4.4  Line 205 of rad 0.180537 links to 204 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  237.93  182.57  3.08
4.4  Line 206 of rad 0.5 links to 205 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  237.82  182.49  3.1
4.4  Line 347 of rad 0.180537 links to 346 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  198.59  171.62  3.41
4.4  Line 348 of rad 0.5 links to 347 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  198.45  171.6  3.4
4.4  Line 452 of rad 0.180537 links to 451 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  169.93  162.77  2.48
4.4  Line 453 of rad 0.5 links to 452 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  169.83  162.68  2.56
4.4  Line 559 of rad 0.180537 links to 558 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  148.83  143.32  3.1
4.4  Line 560 of rad 0.5 links to 559 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  148.7  143.05  3.11
4.4  Line 592 of rad 0.180537 links to 591 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  142.2  136.36  3.9
4.4  Line 593 of rad 0.5 links to 592 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  142.1  136.26  3.9
4.4  Line 634 of rad 0.180537 links to 633 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  131.49  132.07  2.83
4.4  Line 635 of rad 0.5 links to 634 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  131.4  132.06  2.72
4.4  Line 1479 of rad 0.180537 links to 1478 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  129.97  74.71  6.3
4.4  Line 1480 of rad 0.393512 links to 1479 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  129.97  74.4  6.37
4.4  Line 1496 of rad 0.180537 links to 1495 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  129.02  69.88  6.35
4.4  Line 1497 of rad 0.393512 links to 1496 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  128.95  69.59  6.37
4.4  Line 1527 of rad 0.180537 links to 1526 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  125.18  62.09  6.28
4.4  Line 1528 of rad 0.393512 links to 1527 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  125.14  61.81  6.37
4.4  Line 1947 of rad 24.5 links to 3 of rad 6.287.  (no action taken)
     B1      X, Y, Z:  285.29  211.5  6.14
4.4  Line 2204 of rad 0.180537 links to 2203 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  213.03  224.39  2.68
4.4  Line 2205 of rad 0.5 links to 2204 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  212.88  224.4  2.67
4.4  Line 2223 of rad 0.180537 links to 2222 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  207.72  224.69  2.32
4.4  Line 2224 of rad 0.5 links to 2223 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  207.57  224.72  2.3
4.4  Line 2426 of rad 0.180537 links to 2425 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  149.36  218.39  2.59
4.4  Line 2427 of rad 0.5 links to 2426 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  149.21  218.38  2.6
4.4  Line 2435 of rad 0.180537 links to 2434 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  146.94  218.16  2.41
4.4  Line 2436 of rad 0.5 links to 2435 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  146.8  218.14  2.39
4.4  Line 2440 of rad 0.5 links to 2439 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  145.99  218.0  2.33
4.4  Line 2522 of rad 0.180537 links to 2521 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  122.7  212.6  2.11
4.4  Line 2523 of rad 0.5 links to 2522 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  122.53  212.59  2.12
4.4  Line 2560 of rad 0.180537 links to 2559 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  113.2  218.05  2.34
4.4  Line 2561 of rad 0.5 links to 2560 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  113.05  218.07  2.35
4.4  Line 2725 of rad 0.180537 links to 2724 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  68.4  227.0  2.36
4.4  Line 2726 of rad 0.5 links to 2725 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  68.26  226.95  2.39
4.4  Line 3212 of rad 0.180537 links to 3211 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  144.89  217.16  2.36
4.4  Line 3213 of rad 0.5 links to 3212 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  144.76  217.08  2.38
4.4  Line 4426 of rad 0.180537 links to 4425 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  190.76  249.08  5.69
4.4  Line 4427 of rad 0.5 links to 4426 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  190.69  249.21  5.67
4.4  Line 4936 of rad 0.180537 links to 4935 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  220.3  198.05  2.62
4.4  Line 4937 of rad 0.5 links to 4936 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  220.15  198.02  2.59
4.4  Line 5068 of rad 0.180537 links to 5067 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  188.95  177.55  3.1
4.4  Line 5069 of rad 0.5 links to 5068 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  188.73  177.37  3.13
4.4  Line 5299 of rad 0.180537 links to 5298 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  200.96  197.48  1.69
4.4  Line 5300 of rad 0.5 links to 5299 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  200.8  197.49  1.68
4.4  Line 5477 of rad 0.180537 links to 5476 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  152.75  203.98  6.33
4.4  Line 5478 of rad 0.393512 links to 5477 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  152.5  203.87  6.4
4.4  Line 5742 of rad 0.180537 links to 5741 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  259.79  220.9  6.35
4.4  Line 5743 of rad 0.393512 links to 5742 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  259.51  221.01  6.37
4.4  Line 6163 of rad 0.180537 links to 6162 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  261.04  223.29  6.35
4.4  Line 6164 of rad 0.393512 links to 6163 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  260.79  223.47  6.37
2.1  Line 1 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  285.29  211.5  6.14
 
 


Number of type A irregularities = 22
Number of type B1 irregularities = 70
Number of type B2 irregularities = 0
Number of type C irregularities = 0
