# Standardization file for C:\Users\Carolina\Desktop\gaa2ct\data_autoproc\Temp_LMeasure\Animal_6_Basal_1.swc.swc created with StdSwc version 1.31 on 5/17/22.
# Edited SWC file saved as C:\Users\Carolina\Desktop\gaa2ct\data_autoproc\Temp_LMeasure\Animal_6_Basal_1.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  228.71  259.17  6.29
4.3  Radius of line 2 at 3.9625 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  228.65  258.87  6.36
4.3  Radius of line 3 at 1.79844 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  228.65  258.71  6.39
4.3  Radius of line 4 at 1.79844 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  228.66  258.56  6.42
4.3  Radius of line 1006 at 3.9625 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  228.65  258.87  6.36
4.3  Radius of line 1007 at 2.06894 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  228.91  258.63  6.42
4.3  Radius of line 1008 at 0.932815 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  229.14  258.38  6.45
4.3  Radius of line 2687 at 3.9625 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  228.65  258.87  6.36
4.3  Radius of line 2688 at 1.36563 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  228.21  258.58  6.44
4.3  Radius of line 3446 at 1.36563 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  228.21  258.58  6.44
4.3  Radius of line 3447 at 0.892235 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  228.12  258.27  6.45
2.4  Seg length ending at pt. 2073 >= 6.0 stdevs above mean at 0.4794.  (no action taken)
     B1      X, Y, Z:  264.6  202.45  0.4
2.5  Seg length ending at pt. 2687 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  228.65  258.87  6.36
2.4  Seg length ending at pt. 2688 >= 6.0 stdevs above mean at 0.533.  (no action taken)
     B1      X, Y, Z:  228.21  258.58  6.44
2.4  Seg length ending at pt. 3337 >= 6.0 stdevs above mean at 0.5561.  (no action taken)
     B1      X, Y, Z:  181.23  222.37  0.21
2.5  Seg length ending at pt. 3446 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  228.21  258.58  6.44
2.6  Line 2 and line 1006 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  228.65  258.87  6.36
2.6  Line 13 and line 943 have the same coordinates.  (second line removed)
     A      X, Y, Z:  228.77  256.07  6.46
2.6  Line 169 and line 909 have the same coordinates.  (second line removed)
     A      X, Y, Z:  223.42  215.08  0.07
2.6  Line 185 and line 801 have the same coordinates.  (second line removed)
     A      X, Y, Z:  226.56  212.36  0.51
2.6  Line 226 and line 624 have the same coordinates.  (second line removed)
     A      X, Y, Z:  224.43  201.16  0.1
2.6  Line 820 and line 865 have the same coordinates.  (second line removed)
     A      X, Y, Z:  230.22  208.46  0.9
2.6  Line 1092 and line 2260 have the same coordinates.  (second line removed)
     A      X, Y, Z:  245.71  242.03  4.06
2.6  Line 1125 and line 1864 have the same coordinates.  (second line removed)
     A      X, Y, Z:  248.38  235.22  0.87
2.6  Line 1205 and line 1657 have the same coordinates.  (second line removed)
     A      X, Y, Z:  250.85  213.02  0.54
2.6  Line 1663 and line 1822 have the same coordinates.  (second line removed)
     A      X, Y, Z:  250.81  211.06  0.94
2.6  Line 1936 and line 2130 have the same coordinates.  (second line removed)
     A      X, Y, Z:  260.97  218.78  0.35
2.6  Line 1995 and line 2073 have the same coordinates.  (second line removed)
     A      X, Y, Z:  264.55  202.92  0.32
2.6  Line 2163 and line 2229 have the same coordinates.  (second line removed)
     A      X, Y, Z:  268.79  213.72  0.1
2.6  Line 2263 and line 2615 have the same coordinates.  (second line removed)
     A      X, Y, Z:  246.29  241.41  3.78
2.6  Line 2324 and line 2542 have the same coordinates.  (second line removed)
     A      X, Y, Z:  260.63  240.82  0.4
2.6  Line 2791 and line 3404 have the same coordinates.  (second line removed)
     A      X, Y, Z:  203.65  249.21  0.07
2.6  Line 2921 and line 3337 have the same coordinates.  (second line removed)
     A      X, Y, Z:  181.59  222.77  0.07
2.6  Line 3455 and line 3952 have the same coordinates.  (second line removed)
     A      X, Y, Z:  226.9  256.63  6.44
2.6  Line 3598 and line 3868 have the same coordinates.  (second line removed)
     A      X, Y, Z:  208.36  225.29  0.53
4.4  Line 2 of rad 3.9625 links to 1 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  228.65  258.87  6.36
4.4  Line 167 of rad 0.233781 links to 166 of rad 0.100672.  (no action taken)
     B1      X, Y, Z:  223.25  215.32  0.07
4.4  Line 168 of rad 0.5 links to 167 of rad 0.233781.  (no action taken)
     B1      X, Y, Z:  223.34  215.2  0.07
4.4  Line 183 of rad 0.233781 links to 182 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  226.39  212.6  0.58
4.4  Line 184 of rad 0.5 links to 183 of rad 0.233781.  (no action taken)
     B1      X, Y, Z:  226.48  212.48  0.55
4.4  Line 224 of rad 0.180537 links to 223 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  224.43  201.45  0.08
4.4  Line 225 of rad 0.5 links to 224 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  224.43  201.31  0.09
4.4  Line 818 of rad 0.233781 links to 817 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  230.03  208.66  0.92
4.4  Line 819 of rad 0.5 links to 818 of rad 0.233781.  (no action taken)
     B1      X, Y, Z:  230.12  208.56  0.91
4.4  Line 1006 of rad 3.9625 links to 3 of rad 1.79844.  (no action taken)
     B1      X, Y, Z:  228.65  258.87  6.36
4.4  Line 1090 of rad 0.233781 links to 1089 of rad 0.100672.  (no action taken)
     B1      X, Y, Z:  245.61  242.18  4.19
4.4  Line 1091 of rad 0.5 links to 1090 of rad 0.233781.  (no action taken)
     B1      X, Y, Z:  245.66  242.1  4.13
4.4  Line 1123 of rad 0.180537 links to 1122 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  248.32  235.48  0.98
4.4  Line 1124 of rad 0.5 links to 1123 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  248.35  235.35  0.92
4.4  Line 1203 of rad 0.180537 links to 1202 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  250.73  213.31  0.45
4.4  Line 1204 of rad 0.5 links to 1203 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  250.79  213.16  0.5
4.4  Line 1661 of rad 0.180537 links to 1660 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  250.86  211.35  0.9
4.4  Line 1662 of rad 0.5 links to 1661 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  250.83  211.21  0.92
4.4  Line 1934 of rad 0.180537 links to 1933 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  260.84  219.06  0.37
4.4  Line 1935 of rad 0.5 links to 1934 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  260.9  218.92  0.36
4.4  Line 1993 of rad 0.233781 links to 1992 of rad 0.100672.  (no action taken)
     B1      X, Y, Z:  264.52  203.2  0.3
4.4  Line 1994 of rad 0.5 links to 1993 of rad 0.233781.  (no action taken)
     B1      X, Y, Z:  264.54  203.06  0.31
4.4  Line 2161 of rad 0.233781 links to 2160 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  268.51  213.87  0.07
4.4  Line 2162 of rad 0.5 links to 2161 of rad 0.233781.  (no action taken)
     B1      X, Y, Z:  268.65  213.8  0.09
4.4  Line 2322 of rad 0.180537 links to 2321 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  260.33  240.82  0.44
4.4  Line 2323 of rad 0.5 links to 2322 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  260.48  240.82  0.42
4.4  Line 2449 of rad 0.5 links to 2448 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  286.66  255.56  0.08
4.4  Line 2789 of rad 0.233781 links to 2788 of rad 0.100672.  (no action taken)
     B1      X, Y, Z:  203.94  249.26  0.07
4.4  Line 2790 of rad 0.5 links to 2789 of rad 0.233781.  (no action taken)
     B1      X, Y, Z:  203.8  249.24  0.07
4.4  Line 2919 of rad 0.233781 links to 2918 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  181.83  222.93  0.07
4.4  Line 2920 of rad 0.5 links to 2919 of rad 0.233781.  (no action taken)
     B1      X, Y, Z:  181.71  222.85  0.07
4.4  Line 3212 of rad 0.5 links to 3211 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  110.25  247.8  0.41
4.4  Line 3514 of rad 0.233781 links to 3513 of rad 0.100672.  (no action taken)
     B1      X, Y, Z:  219.25  242.21  4.25
4.4  Line 3515 of rad 0.5 links to 3514 of rad 0.233781.  (no action taken)
     B1      X, Y, Z:  219.08  242.04  4.13
4.4  Line 3596 of rad 0.180537 links to 3595 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  208.61  225.42  0.43
4.4  Line 3597 of rad 0.5 links to 3596 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  208.48  225.36  0.48
4.4  Line 3643 of rad 0.180537 links to 3642 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  199.03  216.4  0.74
4.4  Line 3644 of rad 0.5 links to 3643 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  198.87  216.19  0.78
 
 


Number of type A irregularities = 20
Number of type B1 irregularities = 53
Number of type B2 irregularities = 0
Number of type C irregularities = 0
