# Standardization file for C:\Users\Carolina\Desktop\gaa2ct\data_autoproc\Temp_LMeasure\Animal_5_Basal_7.swc.swc created with StdSwc version 1.31 on 5/17/22.
# Edited SWC file saved as C:\Users\Carolina\Desktop\gaa2ct\data_autoproc\Temp_LMeasure\Animal_5_Basal_7.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  197.4  91.12  6.29
4.3  Radius of line 2 at 5.975 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  197.26  91.15  6.33
4.3  Radius of line 3 at 5.975 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  197.12  91.18  6.36
4.3  Radius of line 2680 at 15.1 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  197.4  91.12  6.29
4.3  Radius of line 2681 at 5.975 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  197.15  90.57  6.4
4.3  Radius of line 3612 at 15.1 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  197.4  91.12  6.29
4.3  Radius of line 3613 at 5.975 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  196.87  90.83  6.4
2.4  Seg length ending at pt. 2681 >= 6.0 stdevs above mean at 0.6141.  (no action taken)
     B1      X, Y, Z:  197.15  90.57  6.4
2.5  Seg length ending at pt. 2925 <= 0.1 at 0.0911.  (removed)
     A       X, Y, Z:  138.56  66.38  4.82
2.5  Seg length ending at pt. 3612 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  197.4  91.12  6.29
2.4  Seg length ending at pt. 3613 >= 6.0 stdevs above mean at 0.6141.  (no action taken)
     B1      X, Y, Z:  196.87  90.83  6.4
2.6  Line 1 and line 2680 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  197.4  91.12  6.29
2.6  Line 90 and line 2445 have the same coordinates.  (second line removed)
     A      X, Y, Z:  180.94  104.94  2.77
2.6  Line 101 and line 1558 have the same coordinates.  (second line removed)
     A      X, Y, Z:  179.97  107.78  3.03
2.6  Line 141 and line 1056 have the same coordinates.  (second line removed)
     A      X, Y, Z:  174.28  117.5  4.31
2.6  Line 378 and line 885 have the same coordinates.  (second line removed)
     A      X, Y, Z:  119.41  148.83  0.61
2.6  Line 1567 and line 2393 have the same coordinates.  (second line removed)
     A      X, Y, Z:  178.43  109.78  3.39
2.6  Line 1581 and line 2330 have the same coordinates.  (second line removed)
     A      X, Y, Z:  175.69  112.63  3.33
2.6  Line 1777 and line 2132 have the same coordinates.  (second line removed)
     A      X, Y, Z:  122.34  120.09  3.76
2.6  Line 2007 and line 2094 have the same coordinates.  (second line removed)
     A      X, Y, Z:  65.45  122.89  2.92
2.6  Line 2447 and line 2560 have the same coordinates.  (second line removed)
     A      X, Y, Z:  180.79  105.62  2.88
2.6  Line 2865 and line 3504 have the same coordinates.  (second line removed)
     A      X, Y, Z:  151.33  65.76  5.06
2.6  Line 2926 and line 3447 have the same coordinates.  (second line removed)
     A      X, Y, Z:  138.48  66.42  4.86
2.6  Line 2954 and line 3276 have the same coordinates.  (second line removed)
     A      X, Y, Z:  132.14  67.58  6.17
2.6  Line 3095 and line 3233 have the same coordinates.  (second line removed)
     A      X, Y, Z:  105.54  44.69  4.4
2.6  Line 3284 and line 3377 have the same coordinates.  (second line removed)
     A      X, Y, Z:  130.25  68.62  5.95
2.6  Line 3656 and line 4952 have the same coordinates.  (second line removed)
     A      X, Y, Z:  184.23  90.89  6.42
2.6  Line 3727 and line 4775 have the same coordinates.  (second line removed)
     A      X, Y, Z:  165.89  86.07  3.23
2.6  Line 3851 and line 4647 have the same coordinates.  (second line removed)
     A      X, Y, Z:  134.11  88.34  3.68
2.6  Line 3880 and line 4324 have the same coordinates.  (second line removed)
     A      X, Y, Z:  126.0  89.42  3.83
2.6  Line 3971 and line 4194 have the same coordinates.  (second line removed)
     A      X, Y, Z:  102.85  83.79  2.51
2.6  Line 4005 and line 4157 have the same coordinates.  (second line removed)
     A      X, Y, Z:  100.88  77.23  1.96
2.6  Line 4451 and line 4605 have the same coordinates.  (second line removed)
     A      X, Y, Z:  93.38  93.48  0.07
2.6  Line 4695 and line 4742 have the same coordinates.  (second line removed)
     A      X, Y, Z:  123.18  80.2  3.98
2.6  Line 4843 and line 4923 have the same coordinates.  (second line removed)
     A      X, Y, Z:  150.75  84.66  0.07
4.4  Line 88 of rad 0.180537 links to 87 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  180.99  104.64  2.79
4.4  Line 89 of rad 0.5 links to 88 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  180.96  104.79  2.78
4.4  Line 99 of rad 0.180537 links to 98 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  180.09  107.53  2.97
4.4  Line 100 of rad 0.5 links to 99 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  180.03  107.66  3.0
4.4  Line 139 of rad 0.180537 links to 138 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  174.4  117.23  4.37
4.4  Line 140 of rad 0.5 links to 139 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  174.34  117.36  4.34
4.4  Line 376 of rad 0.180537 links to 375 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  119.5  148.79  0.84
4.4  Line 377 of rad 0.5 links to 376 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  119.46  148.81  0.73
4.4  Line 1565 of rad 0.180537 links to 1564 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  178.62  109.53  3.37
4.4  Line 1566 of rad 0.5 links to 1565 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  178.52  109.65  3.38
4.4  Line 1579 of rad 0.180537 links to 1578 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  175.93  112.43  3.32
4.4  Line 1580 of rad 0.5 links to 1579 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  175.81  112.53  3.33
4.4  Line 1775 of rad 0.180537 links to 1774 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  122.65  120.06  3.79
4.4  Line 1776 of rad 0.5 links to 1775 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  122.49  120.07  3.77
4.4  Line 2005 of rad 0.180537 links to 2004 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  65.74  122.79  2.97
4.4  Line 2006 of rad 0.5 links to 2005 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  65.59  122.84  2.95
4.4  Line 2620 of rad 0.180537 links to 2619 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  172.34  119.92  6.36
4.4  Line 2621 of rad 0.393512 links to 2620 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  172.15  120.15  6.38
4.4  Line 2662 of rad 0.180537 links to 2661 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  162.11  126.78  6.32
4.4  Line 2663 of rad 0.393512 links to 2662 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  161.86  126.96  6.36
4.4  Line 2680 of rad 15.1 links to 2 of rad 5.975.  (no action taken)
     B1      X, Y, Z:  197.4  91.12  6.29
4.4  Line 2773 of rad 0.180537 links to 2772 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  174.22  76.93  6.33
4.4  Line 2774 of rad 0.393512 links to 2773 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  173.99  76.77  6.41
4.4  Line 2863 of rad 0.180537 links to 2862 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  151.59  65.9  5.1
4.4  Line 2864 of rad 0.5 links to 2863 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  151.46  65.83  5.08
4.4  Line 2924 of rad 0.180537 links to 2923 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  138.63  66.33  4.79
4.4  Line 2926 of rad 0.5 links to 2924 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  138.48  66.42  4.86
4.4  Line 2952 of rad 0.180537 links to 2951 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  132.39  67.49  6.09
4.4  Line 2953 of rad 0.5 links to 2952 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  132.27  67.53  6.13
4.4  Line 3093 of rad 0.180537 links to 3092 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  105.83  44.69  4.31
4.4  Line 3094 of rad 0.5 links to 3093 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  105.68  44.69  4.35
4.4  Line 3282 of rad 0.180537 links to 3281 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  130.49  68.5  6.07
4.4  Line 3283 of rad 0.5 links to 3282 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  130.37  68.56  6.01
4.4  Line 3725 of rad 0.180537 links to 3724 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  166.19  86.1  3.26
4.4  Line 3726 of rad 0.5 links to 3725 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  166.04  86.09  3.24
4.4  Line 3849 of rad 0.180537 links to 3848 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  134.41  88.36  3.68
4.4  Line 3850 of rad 0.5 links to 3849 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  134.26  88.35  3.68
4.4  Line 3878 of rad 0.180537 links to 3877 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  126.25  89.39  3.82
4.4  Line 3879 of rad 0.5 links to 3878 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  126.13  89.4  3.82
4.4  Line 3969 of rad 0.180537 links to 3968 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  103.08  83.86  2.58
4.4  Line 3970 of rad 0.5 links to 3969 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  102.97  83.82  2.55
4.4  Line 4003 of rad 0.180537 links to 4002 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  100.72  77.46  2.05
4.4  Line 4004 of rad 0.5 links to 4003 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  100.8  77.35  2.01
4.4  Line 4184 of rad 0.180537 links to 4183 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  102.58  73.96  6.3
4.4  Line 4185 of rad 0.393512 links to 4184 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  102.69  73.69  6.38
4.4  Line 4449 of rad 0.180537 links to 4448 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  93.65  93.59  0.07
4.4  Line 4450 of rad 0.5 links to 4449 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  93.52  93.54  0.07
4.4  Line 4693 of rad 0.180537 links to 4692 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  123.18  80.44  3.8
4.4  Line 4694 of rad 0.5 links to 4693 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  123.18  80.32  3.89
4.4  Line 4841 of rad 0.180537 links to 4840 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  151.03  84.56  0.07
4.4  Line 4842 of rad 0.5 links to 4841 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  150.89  84.61  0.07
 
 


Number of type A irregularities = 25
Number of type B1 irregularities = 61
Number of type B2 irregularities = 0
Number of type C irregularities = 0
