# Standardization file for C:\Users\Carolina\Desktop\gaa2ct\data_autoproc\Temp_LMeasure\Animal_1_Basal_5.swc.swc created with StdSwc version 1.31 on 5/17/22.
# Edited SWC file saved as C:\Users\Carolina\Desktop\gaa2ct\data_autoproc\Temp_LMeasure\Animal_1_Basal_5.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  72.11  172.88  6.29
4.3  Radius of line 2 at 3.625 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  72.23  172.5  6.35
4.3  Radius of line 3 at 1.91602 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  72.29  172.32  6.38
4.3  Radius of line 4 at 1.91602 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  72.35  172.15  6.41
4.3  Radius of line 5 at 0.890625 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  72.52  171.82  6.44
4.3  Radius of line 5057 at 3.625 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  72.23  172.5  6.35
4.3  Radius of line 5058 at 2.08691 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  72.03  172.13  6.41
4.3  Radius of line 5059 at 1.06153 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  71.96  171.76  6.44
4.3  Radius of line 6218 at 3.625 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  72.23  172.5  6.35
4.3  Radius of line 6219 at 2.08691 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  71.7  172.53  6.41
4.3  Radius of line 6220 at 1.06153 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  71.31  172.48  6.44
2.4  Seg length ending at pt. 6149 >= 6.0 stdevs above mean at 0.4888.  (no action taken)
     B1      X, Y, Z:  72.95  166.91  6.44
2.5  Seg length ending at pt. 6218 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  72.23  172.5  6.35
2.4  Seg length ending at pt. 6219 >= 6.0 stdevs above mean at 0.5342.  (no action taken)
     B1      X, Y, Z:  71.7  172.53  6.41
2.6  Line 2 and line 5057 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  72.23  172.5  6.35
2.6  Line 33 and line 4984 have the same coordinates.  (second line removed)
     A      X, Y, Z:  78.29  166.16  6.45
2.6  Line 37 and line 3204 have the same coordinates.  (second line removed)
     A      X, Y, Z:  79.09  165.65  6.45
2.6  Line 65 and line 2737 have the same coordinates.  (second line removed)
     A      X, Y, Z:  85.66  163.32  4.06
2.6  Line 145 and line 1380 have the same coordinates.  (second line removed)
     A      X, Y, Z:  104.13  150.33  2.76
2.6  Line 198 and line 1310 have the same coordinates.  (second line removed)
     A      X, Y, Z:  115.68  140.82  2.01
2.6  Line 268 and line 1250 have the same coordinates.  (second line removed)
     A      X, Y, Z:  127.47  124.95  1.89
2.6  Line 443 and line 1183 have the same coordinates.  (second line removed)
     A      X, Y, Z:  149.11  88.52  3.91
2.6  Line 472 and line 1149 have the same coordinates.  (second line removed)
     A      X, Y, Z:  151.77  82.63  5.23
2.6  Line 478 and line 1116 have the same coordinates.  (second line removed)
     A      X, Y, Z:  152.2  81.49  4.83
2.6  Line 495 and line 1075 have the same coordinates.  (second line removed)
     A      X, Y, Z:  153.72  77.13  4.11
2.6  Line 537 and line 1044 have the same coordinates.  (second line removed)
     A      X, Y, Z:  162.49  70.05  5.43
2.6  Line 552 and line 909 have the same coordinates.  (second line removed)
     A      X, Y, Z:  165.94  67.7  5.45
2.6  Line 579 and line 876 have the same coordinates.  (second line removed)
     A      X, Y, Z:  168.46  60.67  4.41
2.6  Line 632 and line 825 have the same coordinates.  (second line removed)
     A      X, Y, Z:  179.79  52.31  4.94
2.6  Line 1418 and line 2626 have the same coordinates.  (second line removed)
     A      X, Y, Z:  113.83  144.78  2.56
2.6  Line 1540 and line 2331 have the same coordinates.  (second line removed)
     A      X, Y, Z:  144.37  127.6  2.88
2.6  Line 1650 and line 2300 have the same coordinates.  (second line removed)
     A      X, Y, Z:  172.19  112.07  3.11
2.6  Line 1743 and line 2223 have the same coordinates.  (second line removed)
     A      X, Y, Z:  190.32  93.03  3.41
2.6  Line 1828 and line 2108 have the same coordinates.  (second line removed)
     A      X, Y, Z:  207.31  76.92  3.99
2.6  Line 1984 and line 2062 have the same coordinates.  (second line removed)
     A      X, Y, Z:  214.83  49.97  4.3
2.6  Line 2369 and line 2596 have the same coordinates.  (second line removed)
     A      X, Y, Z:  144.66  116.96  3.06
2.6  Line 2849 and line 3032 have the same coordinates.  (second line removed)
     A      X, Y, Z:  117.6  157.82  3.51
2.6  Line 3220 and line 4923 have the same coordinates.  (second line removed)
     A      X, Y, Z:  81.93  162.16  6.44
2.6  Line 3232 and line 4821 have the same coordinates.  (second line removed)
     A      X, Y, Z:  83.03  159.11  6.43
2.6  Line 3247 and line 4737 have the same coordinates.  (second line removed)
     A      X, Y, Z:  85.1  155.41  6.2
2.6  Line 3266 and line 4418 have the same coordinates.  (second line removed)
     A      X, Y, Z:  89.74  152.84  6.41
2.6  Line 3414 and line 3938 have the same coordinates.  (second line removed)
     A      X, Y, Z:  107.3  116.89  3.06
2.6  Line 3419 and line 3739 have the same coordinates.  (second line removed)
     A      X, Y, Z:  108.2  116.14  3.18
2.6  Line 3830 and line 3902 have the same coordinates.  (second line removed)
     A      X, Y, Z:  128.07  99.63  4.12
2.6  Line 4034 and line 4329 have the same coordinates.  (second line removed)
     A      X, Y, Z:  123.89  95.38  2.46
2.6  Line 4050 and line 4280 have the same coordinates.  (second line removed)
     A      X, Y, Z:  124.55  91.22  3.57
2.6  Line 4525 and line 4666 have the same coordinates.  (second line removed)
     A      X, Y, Z:  106.87  131.05  3.56
2.6  Line 5075 and line 6149 have the same coordinates.  (second line removed)
     A      X, Y, Z:  72.7  167.33  6.44
2.6  Line 5180 and line 5778 have the same coordinates.  (second line removed)
     A      X, Y, Z:  76.08  140.08  2.13
2.6  Line 5235 and line 5681 have the same coordinates.  (second line removed)
     A      X, Y, Z:  84.4  130.37  2.66
2.6  Line 6226 and line 6407 have the same coordinates.  (second line removed)
     A      X, Y, Z:  69.81  172.91  6.45
4.4  Line 2 of rad 3.625 links to 1 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  72.23  172.5  6.35
4.4  Line 63 of rad 0.267058 links to 62 of rad 0.127294.  (no action taken)
     B1      X, Y, Z:  85.42  163.38  4.18
4.4  Line 115 of rad 0.267058 links to 114 of rad 0.127294.  (no action taken)
     B1      X, Y, Z:  96.36  154.11  2.8
4.4  Line 128 of rad 0.260403 links to 127 of rad 0.113983.  (no action taken)
     B1      X, Y, Z:  100.03  152.71  2.62
4.4  Line 143 of rad 0.260403 links to 142 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  103.88  150.47  2.76
4.4  Line 196 of rad 0.267058 links to 195 of rad 0.127294.  (no action taken)
     B1      X, Y, Z:  115.64  141.11  2.08
4.4  Line 250 of rad 0.240436 links to 249 of rad 0.113983.  (no action taken)
     B1      X, Y, Z:  124.08  128.56  2.28
4.4  Line 251 of rad 0.5 links to 250 of rad 0.240436.  (no action taken)
     B1      X, Y, Z:  124.27  128.34  2.3
4.4  Line 266 of rad 0.267058 links to 265 of rad 0.127294.  (no action taken)
     B1      X, Y, Z:  127.3  125.18  1.87
4.4  Line 442 of rad 0.5 links to 441 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  149.01  88.62  3.93
4.4  Line 470 of rad 0.233781 links to 469 of rad 0.100672.  (no action taken)
     B1      X, Y, Z:  151.69  82.86  5.32
4.4  Line 471 of rad 0.5 links to 470 of rad 0.233781.  (no action taken)
     B1      X, Y, Z:  151.73  82.75  5.28
4.4  Line 476 of rad 0.267058 links to 475 of rad 0.127294.  (no action taken)
     B1      X, Y, Z:  152.11  81.71  4.9
4.4  Line 494 of rad 0.5 links to 493 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  153.63  77.27  4.14
4.4  Line 535 of rad 0.240436 links to 534 of rad 0.113983.  (no action taken)
     B1      X, Y, Z:  162.25  70.23  5.42
4.4  Line 536 of rad 0.5 links to 535 of rad 0.240436.  (no action taken)
     B1      X, Y, Z:  162.37  70.14  5.43
4.4  Line 550 of rad 0.260403 links to 549 of rad 0.113983.  (no action taken)
     B1      X, Y, Z:  165.67  67.86  5.51
4.4  Line 577 of rad 0.260403 links to 576 of rad 0.113983.  (no action taken)
     B1      X, Y, Z:  168.39  60.95  4.37
4.4  Line 612 of rad 0.240436 links to 611 of rad 0.113983.  (no action taken)
     B1      X, Y, Z:  175.29  55.18  5.2
4.4  Line 613 of rad 0.5 links to 612 of rad 0.240436.  (no action taken)
     B1      X, Y, Z:  175.58  55.08  5.23
4.4  Line 631 of rad 0.5 links to 630 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  179.71  52.44  4.96
4.4  Line 1416 of rad 0.233781 links to 1415 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  113.56  144.92  2.53
4.4  Line 1417 of rad 0.5 links to 1416 of rad 0.233781.  (no action taken)
     B1      X, Y, Z:  113.69  144.85  2.54
4.4  Line 1538 of rad 0.180537 links to 1537 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  144.11  127.76  2.87
4.4  Line 1539 of rad 0.5 links to 1538 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  144.24  127.68  2.87
4.4  Line 1648 of rad 0.260403 links to 1647 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  171.98  112.29  3.04
4.4  Line 1674 of rad 0.233781 links to 1673 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  176.53  106.7  3.13
4.4  Line 1675 of rad 0.5 links to 1674 of rad 0.233781.  (no action taken)
     B1      X, Y, Z:  176.72  106.46  3.17
4.4  Line 1741 of rad 0.233781 links to 1740 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  190.07  93.17  3.4
4.4  Line 1742 of rad 0.5 links to 1741 of rad 0.233781.  (no action taken)
     B1      X, Y, Z:  190.2  93.1  3.41
4.4  Line 1820 of rad 0.180537 links to 1819 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  205.78  78.32  3.88
4.4  Line 1821 of rad 0.5 links to 1820 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  205.96  78.11  3.83
4.4  Line 1826 of rad 0.233781 links to 1825 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  207.09  77.13  3.91
4.4  Line 1827 of rad 0.5 links to 1826 of rad 0.233781.  (no action taken)
     B1      X, Y, Z:  207.2  77.03  3.95
4.4  Line 1905 of rad 0.240436 links to 1904 of rad 0.113983.  (no action taken)
     B1      X, Y, Z:  198.68  57.92  3.69
4.4  Line 1906 of rad 0.5 links to 1905 of rad 0.240436.  (no action taken)
     B1      X, Y, Z:  198.77  57.67  3.53
4.4  Line 1982 of rad 0.180537 links to 1981 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  214.54  49.98  4.34
4.4  Line 1983 of rad 0.5 links to 1982 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  214.69  49.97  4.32
4.4  Line 2367 of rad 0.180537 links to 2366 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  144.71  117.24  3.17
4.4  Line 2368 of rad 0.5 links to 2367 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  144.68  117.1  3.11
4.4  Line 2482 of rad 0.233781 links to 2481 of rad 0.100672.  (no action taken)
     B1      X, Y, Z:  166.4  101.61  4.94
4.4  Line 2483 of rad 0.5 links to 2482 of rad 0.233781.  (no action taken)
     B1      X, Y, Z:  166.48  101.32  4.85
4.4  Line 2753 of rad 0.233781 links to 2752 of rad 0.100672.  (no action taken)
     B1      X, Y, Z:  90.21  161.4  2.86
4.4  Line 2754 of rad 0.5 links to 2753 of rad 0.233781.  (no action taken)
     B1      X, Y, Z:  90.46  161.22  2.83
4.4  Line 2847 of rad 0.260403 links to 2846 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  117.31  157.93  3.48
4.4  Line 3245 of rad 0.267058 links to 3244 of rad 0.127294.  (no action taken)
     B1      X, Y, Z:  84.92  155.66  6.21
4.4  Line 3392 of rad 0.233781 links to 3391 of rad 0.100672.  (no action taken)
     B1      X, Y, Z:  104.15  122.15  2.68
4.4  Line 3393 of rad 0.5 links to 3392 of rad 0.233781.  (no action taken)
     B1      X, Y, Z:  104.2  121.85  2.72
4.4  Line 3413 of rad 0.5 links to 3412 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  107.19  116.99  3.03
4.4  Line 3418 of rad 0.5 links to 3417 of rad 0.247092.  (no action taken)
     B1      X, Y, Z:  108.09  116.24  3.17
4.4  Line 3513 of rad 0.260403 links to 3512 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  111.54  89.96  2.64
4.4  Line 3581 of rad 0.233781 links to 3580 of rad 0.100672.  (no action taken)
     B1      X, Y, Z:  110.34  74.28  1.69
4.4  Line 3582 of rad 0.5 links to 3581 of rad 0.233781.  (no action taken)
     B1      X, Y, Z:  110.28  74.04  1.79
4.4  Line 3829 of rad 0.5 links to 3828 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  127.97  99.73  4.1
4.4  Line 3834 of rad 0.260403 links to 3833 of rad 0.120638.  (no action taken)
     B1      X, Y, Z:  128.92  98.86  4.05
4.4  Line 3987 of rad 0.233781 links to 3986 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  117.58  106.15  2.1
4.4  Line 3988 of rad 0.5 links to 3987 of rad 0.233781.  (no action taken)
     B1      X, Y, Z:  117.77  105.93  2.12
4.4  Line 4004 of rad 0.260403 links to 4003 of rad 0.113983.  (no action taken)
     B1      X, Y, Z:  119.91  102.2  2.33
4.4  Line 4032 of rad 0.267058 links to 4031 of rad 0.127294.  (no action taken)
     B1      X, Y, Z:  123.76  95.56  2.35
4.4  Line 4048 of rad 0.260403 links to 4047 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  124.43  91.48  3.51
4.4  Line 4178 of rad 0.180537 links to 4177 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  140.35  61.0  3.82
4.4  Line 4179 of rad 0.5 links to 4178 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  140.51  60.85  3.7
4.4  Line 4508 of rad 0.233781 links to 4507 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  104.53  135.08  2.97
4.4  Line 4509 of rad 0.5 links to 4508 of rad 0.233781.  (no action taken)
     B1      X, Y, Z:  104.55  134.77  2.99
4.4  Line 4523 of rad 0.240436 links to 4522 of rad 0.113983.  (no action taken)
     B1      X, Y, Z:  106.72  131.27  3.57
4.4  Line 4524 of rad 0.5 links to 4523 of rad 0.240436.  (no action taken)
     B1      X, Y, Z:  106.79  131.16  3.57
4.4  Line 4546 of rad 0.267058 links to 4545 of rad 0.127294.  (no action taken)
     B1      X, Y, Z:  111.44  126.65  3.37
4.4  Line 5174 of rad 0.180537 links to 5173 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  75.53  141.41  2.28
4.4  Line 5175 of rad 0.5 links to 5174 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  75.64  141.14  2.24
4.4  Line 5208 of rad 0.267058 links to 5207 of rad 0.127294.  (no action taken)
     B1      X, Y, Z:  81.48  134.99  0.07
4.4  Line 5234 of rad 0.5 links to 5233 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  84.38  130.52  2.66
4.4  Line 5294 of rad 0.260403 links to 5293 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  84.1  114.33  1.19
4.4  Line 5860 of rad 0.240436 links to 5859 of rad 0.113983.  (no action taken)
     B1      X, Y, Z:  66.42  123.54  2.18
4.4  Line 5861 of rad 0.5 links to 5860 of rad 0.240436.  (no action taken)
     B1      X, Y, Z:  66.17  123.41  2.05
 
 


Number of type A irregularities = 37
Number of type B1 irregularities = 88
Number of type B2 irregularities = 0
Number of type C irregularities = 0
