# Standardization file for C:\Users\Carolina\Desktop\gaa2ct\data_autoproc\Temp_LMeasure\Animal_1_Basal_4.swc.swc created with StdSwc version 1.31 on 5/17/22.
# Edited SWC file saved as C:\Users\Carolina\Desktop\gaa2ct\data_autoproc\Temp_LMeasure\Animal_1_Basal_4.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  101.1  150.08  6.37
4.3  Radius of line 283 at 2.5875 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  48.08  149.72  6.35
4.3  Radius of line 284 at 1.56006 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  48.39  149.69  6.38
4.3  Radius of line 285 at 1.56006 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  48.71  149.66  6.41
4.3  Radius of line 286 at 0.8751 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  49.17  149.59  6.44
4.3  Radius of line 2609 at 2.5875 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  48.08  149.72  6.35
4.3  Radius of line 2610 at 1.56006 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  47.7  149.46  6.42
4.3  Radius of line 2611 at 0.8751 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  47.4  149.21  6.45
4.3  Radius of line 2765 at 2.5875 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  48.08  149.72  6.35
4.5  Radius of terminal line 4006 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  52.1  129.77  5.91
2.4  Seg length ending at pt. 2 >= 6.0 stdevs above mean at 17.4278.  (no action taken)
     B1      X, Y, Z:  108.4  134.59  3.13
2.4  Seg length ending at pt. 40 >= 6.0 stdevs above mean at 17.5195.  (no action taken)
     B1      X, Y, Z:  101.31  150.29  6.32
2.4  Seg length ending at pt. 282 >= 6.0 stdevs above mean at 52.9104.  (no action taken)
     B1      X, Y, Z:  48.19  149.9  6.29
2.5  Seg length ending at pt. 2765 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  48.08  149.72  6.35
2.5  Seg length ending at pt. 4146 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  47.99  149.45  6.41
2.6  Line 283 and line 2609 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  48.08  149.72  6.35
2.6  Line 300 and line 1912 have the same coordinates.  (second line removed)
     A      X, Y, Z:  52.74  149.16  5.83
2.6  Line 350 and line 1441 have the same coordinates.  (second line removed)
     A      X, Y, Z:  63.93  145.02  2.51
2.6  Line 423 and line 1356 have the same coordinates.  (second line removed)
     A      X, Y, Z:  83.36  136.77  2.39
2.6  Line 433 and line 1150 have the same coordinates.  (second line removed)
     A      X, Y, Z:  85.81  135.69  2.95
2.6  Line 437 and line 983 have the same coordinates.  (second line removed)
     A      X, Y, Z:  86.67  135.38  2.85
2.6  Line 442 and line 799 have the same coordinates.  (second line removed)
     A      X, Y, Z:  87.75  134.98  2.58
2.6  Line 727 and line 776 have the same coordinates.  (second line removed)
     A      X, Y, Z:  144.87  80.5  1.87
2.6  Line 846 and line 924 have the same coordinates.  (second line removed)
     A      X, Y, Z:  97.53  126.62  1.33
2.6  Line 1214 and line 1310 have the same coordinates.  (second line removed)
     A      X, Y, Z:  103.14  132.55  0.1
2.6  Line 1688 and line 1871 have the same coordinates.  (second line removed)
     A      X, Y, Z:  103.79  91.12  2.47
2.6  Line 1755 and line 1834 have the same coordinates.  (second line removed)
     A      X, Y, Z:  117.39  78.48  2.86
2.6  Line 2000 and line 2551 have the same coordinates.  (second line removed)
     A      X, Y, Z:  76.81  147.19  5.76
2.6  Line 2086 and line 2465 have the same coordinates.  (second line removed)
     A      X, Y, Z:  101.09  147.55  5.99
2.6  Line 2139 and line 2322 have the same coordinates.  (second line removed)
     A      X, Y, Z:  116.34  146.09  5.83
2.6  Line 2622 and line 2697 have the same coordinates.  (second line removed)
     A      X, Y, Z:  45.08  147.36  6.36
2.6  Line 2808 and line 4008 have the same coordinates.  (second line removed)
     A      X, Y, Z:  51.71  137.89  6.4
2.6  Line 2830 and line 4001 have the same coordinates.  (second line removed)
     A      X, Y, Z:  51.99  131.75  6.05
2.6  Line 2835 and line 3942 have the same coordinates.  (second line removed)
     A      X, Y, Z:  52.02  130.64  6.2
2.6  Line 2839 and line 3896 have the same coordinates.  (second line removed)
     A      X, Y, Z:  52.12  129.82  6.21
2.6  Line 2945 and line 3578 have the same coordinates.  (second line removed)
     A      X, Y, Z:  46.31  101.46  6.44
2.6  Line 2969 and line 3367 have the same coordinates.  (second line removed)
     A      X, Y, Z:  45.92  94.72  6.26
2.6  Line 4251 and line 4444 have the same coordinates.  (second line removed)
     A      X, Y, Z:  62.31  130.82  3.03
4.4  Line 283 of rad 2.5875 links to 282 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  48.08  149.72  6.35
4.4  Line 298 of rad 0.267058 links to 297 of rad 0.127294.  (no action taken)
     B1      X, Y, Z:  52.51  149.24  5.93
4.4  Line 324 of rad 0.267058 links to 323 of rad 0.100672.  (no action taken)
     B1      X, Y, Z:  58.42  148.33  3.56
4.4  Line 348 of rad 0.267058 links to 347 of rad 0.127294.  (no action taken)
     B1      X, Y, Z:  63.71  145.16  2.57
4.4  Line 410 of rad 0.260403 links to 409 of rad 0.113983.  (no action taken)
     B1      X, Y, Z:  80.35  138.53  2.57
4.4  Line 421 of rad 0.267058 links to 420 of rad 0.127294.  (no action taken)
     B1      X, Y, Z:  83.11  136.93  2.45
4.4  Line 432 of rad 0.5 links to 431 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  85.66  135.74  2.94
4.4  Line 726 of rad 0.5 links to 725 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  144.75  80.57  1.87
4.4  Line 844 of rad 0.240436 links to 843 of rad 0.113983.  (no action taken)
     B1      X, Y, Z:  97.55  126.92  1.33
4.4  Line 845 of rad 0.5 links to 844 of rad 0.240436.  (no action taken)
     B1      X, Y, Z:  97.54  126.77  1.33
4.4  Line 1014 of rad 0.233781 links to 1013 of rad 0.100672.  (no action taken)
     B1      X, Y, Z:  95.9  136.71  2.9
4.4  Line 1015 of rad 0.5 links to 1014 of rad 0.233781.  (no action taken)
     B1      X, Y, Z:  96.19  136.7  2.95
4.4  Line 1212 of rad 0.267058 links to 1211 of rad 0.127294.  (no action taken)
     B1      X, Y, Z:  102.87  132.64  0.08
4.4  Line 1224 of rad 0.267058 links to 1223 of rad 0.127294.  (no action taken)
     B1      X, Y, Z:  105.33  132.67  1.22
4.4  Line 1237 of rad 0.5 links to 1236 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  108.32  132.89  2.7
4.4  Line 1498 of rad 0.233781 links to 1497 of rad 0.100672.  (no action taken)
     B1      X, Y, Z:  71.25  130.33  1.87
4.4  Line 1499 of rad 0.5 links to 1498 of rad 0.233781.  (no action taken)
     B1      X, Y, Z:  71.36  130.06  1.87
4.4  Line 1566 of rad 0.5 links to 1565 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  82.83  114.85  2.07
4.4  Line 1605 of rad 0.260403 links to 1604 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  84.76  104.28  3.42
4.4  Line 1687 of rad 0.5 links to 1686 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  103.67  91.22  2.48
4.4  Line 1753 of rad 0.267058 links to 1752 of rad 0.127294.  (no action taken)
     B1      X, Y, Z:  117.16  78.65  2.88
4.4  Line 1954 of rad 0.267058 links to 1953 of rad 0.127294.  (no action taken)
     B1      X, Y, Z:  63.83  146.79  5.79
4.4  Line 1998 of rad 0.267058 links to 1997 of rad 0.127294.  (no action taken)
     B1      X, Y, Z:  76.54  147.15  5.82
4.4  Line 2032 of rad 0.233781 links to 2031 of rad 0.100672.  (no action taken)
     B1      X, Y, Z:  85.59  148.52  5.63
4.4  Line 2033 of rad 0.5 links to 2032 of rad 0.233781.  (no action taken)
     B1      X, Y, Z:  85.88  148.5  5.62
4.4  Line 2052 of rad 0.240436 links to 2051 of rad 0.113983.  (no action taken)
     B1      X, Y, Z:  91.22  147.09  5.57
4.4  Line 2053 of rad 0.5 links to 2052 of rad 0.240436.  (no action taken)
     B1      X, Y, Z:  91.49  147.0  5.54
4.4  Line 2069 of rad 0.267058 links to 2068 of rad 0.127294.  (no action taken)
     B1      X, Y, Z:  96.33  146.97  5.97
4.4  Line 2084 of rad 0.267058 links to 2083 of rad 0.127294.  (no action taken)
     B1      X, Y, Z:  100.81  147.58  5.98
4.4  Line 2137 of rad 0.240436 links to 2136 of rad 0.113983.  (no action taken)
     B1      X, Y, Z:  116.04  146.16  5.88
4.4  Line 2138 of rad 0.5 links to 2137 of rad 0.240436.  (no action taken)
     B1      X, Y, Z:  116.19  146.12  5.85
4.4  Line 2828 of rad 0.267058 links to 2827 of rad 0.127294.  (no action taken)
     B1      X, Y, Z:  51.97  132.01  6.05
4.4  Line 2877 of rad 0.240436 links to 2876 of rad 0.113983.  (no action taken)
     B1      X, Y, Z:  51.86  119.1  5.88
4.4  Line 2878 of rad 0.5 links to 2877 of rad 0.240436.  (no action taken)
     B1      X, Y, Z:  51.7  118.85  5.89
4.4  Line 3041 of rad 0.180537 links to 3040 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  37.95  80.93  3.76
4.4  Line 3042 of rad 0.5 links to 3041 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  37.69  80.83  3.62
4.4  Line 3135 of rad 0.180537 links to 3134 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  24.96  61.35  4.16
4.4  Line 3136 of rad 0.5 links to 3135 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  24.72  61.16  4.16
4.4  Line 3141 of rad 0.260403 links to 3140 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  23.48  60.37  3.93
4.4  Line 3147 of rad 0.260403 links to 3146 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  22.01  59.47  4.08
4.4  Line 3254 of rad 0.5 links to 3253 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  33.3  34.33  2.83
4.4  Line 3276 of rad 0.5 links to 3275 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  34.2  28.5  2.47
4.4  Line 3288 of rad 0.240436 links to 3287 of rad 0.113983.  (no action taken)
     B1      X, Y, Z:  34.03  24.83  2.19
4.4  Line 3289 of rad 0.5 links to 3288 of rad 0.240436.  (no action taken)
     B1      X, Y, Z:  34.01  24.53  2.2
4.4  Line 3304 of rad 0.5 links to 3303 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  36.09  20.82  2.19
4.4  Line 3481 of rad 0.233781 links to 3480 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  45.43  65.24  4.4
4.4  Line 3482 of rad 0.5 links to 3481 of rad 0.233781.  (no action taken)
     B1      X, Y, Z:  45.57  64.99  4.43
4.4  Line 3508 of rad 0.260403 links to 3507 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  48.13  58.01  3.23
4.4  Line 3585 of rad 0.267058 links to 3584 of rad 0.127294.  (no action taken)
     B1      X, Y, Z:  46.44  99.71  5.24
4.4  Line 3612 of rad 0.267058 links to 3611 of rad 0.127294.  (no action taken)
     B1      X, Y, Z:  45.65  93.06  3.45
4.4  Line 3628 of rad 0.240436 links to 3627 of rad 0.113983.  (no action taken)
     B1      X, Y, Z:  47.12  88.45  3.73
4.4  Line 3629 of rad 0.5 links to 3628 of rad 0.240436.  (no action taken)
     B1      X, Y, Z:  47.13  88.15  3.75
4.4  Line 3794 of rad 0.180537 links to 3793 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  61.43  48.37  4.42
4.4  Line 3795 of rad 0.5 links to 3794 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  61.44  48.05  4.42
4.4  Line 3800 of rad 0.267058 links to 3799 of rad 0.127294.  (no action taken)
     B1      X, Y, Z:  61.97  46.52  4.34
4.4  Line 4005 of rad 0.267058 links to 4004 of rad 0.127294.  (no action taken)
     B1      X, Y, Z:  52.07  130.06  5.97
4.4  Line 4249 of rad 0.260403 links to 4248 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  62.13  131.03  2.9
4.4  Line 4321 of rad 0.180537 links to 4320 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  74.68  115.16  3.84
4.4  Line 4322 of rad 0.5 links to 4321 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  74.93  115.02  3.86
4.4  Line 4377 of rad 0.233781 links to 4376 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  79.48  100.59  4.33
4.4  Line 4378 of rad 0.5 links to 4377 of rad 0.233781.  (no action taken)
     B1      X, Y, Z:  79.58  100.37  4.44
 
 


Number of type A irregularities = 24
Number of type B1 irregularities = 75
Number of type B2 irregularities = 0
Number of type C irregularities = 0
